RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 FAM177A1Q8N128 213 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-221ENST00000553498 CCDC24Q8N4L8 307 aa8.49□□□□□ -1.05
ATXN3-221ENST00000553498 LEO1Q8WVC0 666 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-221ENST00000553498 DDX11Q96FC9 970 aa8.49□□□□□ -1.05
ATXN3-221ENST00000553498 ZSCAN10Q96SZ4 725 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-221ENST00000553498 MAP3K14Q99558 947 aa8.49□□□□□ -1.05
ATXN3-221ENST00000553498 DCP1AQ9NPI6 582 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-221ENST00000553498 TMEM63CQ9P1W3 806 aa8.49□□□□□ -1.05
ATXN3-221ENST00000553498 RCOR1Q9UKL0 485 aa8.49□□□□□ -1.05
ATXN3-221ENST00000553498 SBF2Q86WG5 1849 aa8.49□□□□□ -1.05
ATXN3-221ENST00000553498 MROH7-TTC4A0A0A0MT08 1334 aa8.49□□□□□ -1.05
ATXN3-221ENST00000553498 ROBO3Q96MS0 1386 aa8.48□□□□□ -1.05
ATXN3-221ENST00000553498 TAF1LQ8IZX4 1826 aa8.48□□□□□ -1.05
ATXN3-221ENST00000553498 GPR75-ASB3A0A0A6YYF3 556 aa8.48□□□□□ -1.05
ATXN3-221ENST00000553498 MINDY4BA8MYZ0 360 aa8.48□□□□□ -1.05
ATXN3-221ENST00000553498 DEXIO95424 95 aa8.48□□□□□ -1.05
ATXN3-221ENST00000553498 YEATS4O95619 227 aa8.48□□□□□ -1.05
ATXN3-221ENST00000553498 CAVIN2O95810 425 aa8.48□□□□□ -1.05
ATXN3-221ENST00000553498 XBP1P17861 261 aa8.48□□□□□ -1.05
ATXN3-221ENST00000553498 FKBP1AP62942 108 aaKnown RBP8.48□□□□□ -1.05
ATXN3-221ENST00000553498 CTDSPL2Q05D32 466 aa8.48□□□□□ -1.05
ATXN3-221ENST00000553498 SSRP1Q08945 709 aaKnown RBP8.48□□□□□ -1.05
ATXN3-221ENST00000553498 NTRK3Q16288 839 aa8.48□□□□□ -1.05
ATXN3-221ENST00000553498 RTN1Q16799 776 aa8.48□□□□□ -1.05
ATXN3-221ENST00000553498 UVSSAQ2YD98 709 aa8.48□□□□□ -1.05
ATXN3-221ENST00000553498 PRPF38BQ5VTL8 546 aaKnown RBP8.48□□□□□ -1.05
ATXN3-221ENST00000553498 CATIPQ7Z7H3 387 aa8.48□□□□□ -1.05
ATXN3-221ENST00000553498 TXNRD3Q86VQ6 643 aa8.48□□□□□ -1.05
ATXN3-221ENST00000553498 PRR7Q8TB68 274 aa8.48□□□□□ -1.05
ATXN3-221ENST00000553498 KCNG4Q8TDN1 519 aa8.48□□□□□ -1.05
ATXN3-221ENST00000553498 ZNF384Q8TF68 577 aa8.48□□□□□ -1.05
ATXN3-221ENST00000553498 SDR42E1Q8WUS8 393 aa8.48□□□□□ -1.05
ATXN3-221ENST00000553498 ANKS1AQ92625 1134 aa8.48□□□□□ -1.05
ATXN3-221ENST00000553498 ZC3H12CQ9C0D7 883 aaKnown RBP8.48□□□□□ -1.05
ATXN3-221ENST00000553498 NCOA5Q9HCD5 579 aaKnown RBP8.48□□□□□ -1.05
ATXN3-221ENST00000553498 TOMM22Q9NS69 142 aa8.48□□□□□ -1.05
ATXN3-221ENST00000553498 TCP11L1Q9NUJ3 509 aa8.48□□□□□ -1.05
ATXN3-221ENST00000553498 POLR3EQ9NVU0 708 aa8.48□□□□□ -1.05
ATXN3-221ENST00000553498 AATFQ9NY61 560 aaKnown RBP eCLIP8.48□□□□□ -1.05
ATXN3-221ENST00000553498 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.48□□□□□ -1.05
ATXN3-221ENST00000553498 COL4A1P02462 1669 aa8.48□□□□□ -1.05
ATXN3-221ENST00000553498 DOCK2Q92608 1830 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 AKAP11Q9UKA4 1901 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 WTIPA6NIX2 430 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-221ENST00000553498 SPDYE5A6NIY4 337 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 USP17L12C9JPN9 530 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 USP17L21D6R901 530 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 CTAGE5O15320 804 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 GADD45BO75293 160 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-221ENST00000553498 MMP10P09238 476 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 USP5P45974 858 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 NASPP49321 788 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-221ENST00000553498 DYNLL1P63167 89 aaKnown RBP8.47□□□□□ -1.05
ATXN3-221ENST00000553498 CCDC173Q0VFZ6 552 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 SAFBQ15424 915 aaKnown RBP eCLIP8.47□□□□□ -1.05
ATXN3-221ENST00000553498 SEC23AQ15436 765 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 SLC15A2Q16348 729 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 QPCTQ16769 361 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 IFIT1BQ5T764 474 aaKnown RBP8.47□□□□□ -1.05
ATXN3-221ENST00000553498 C12orf60Q5U649 245 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 PODNQ7Z5L7 613 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 TTC6Q86TZ1 520 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 FERMT3Q86UX7 667 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 MICU3Q86XE3 530 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 DGKHQ86XP1 1220 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 ZNF654Q8IZM8 581 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 MPNDQ8N594 471 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 JMYQ8N9B5 988 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 FANCBQ8NB91 859 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 ALG1Q9BT22 464 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 MRIQ9BWK5 157 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 RNF26Q9BY78 433 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-221ENST00000553498 TSPY26PQ9H489 355 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 STK32BQ9NY57 414 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 RTEL1Q9NZ71 1219 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 MKRN1Q9UHC7 482 aaKnown RBP8.47□□□□□ -1.05
ATXN3-221ENST00000553498 MORC2Q9Y6X9 1032 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-221ENST00000553498 RGPD3A6NKT7 1758 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-221ENST00000553498 RGPD4Q7Z3J3 1758 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 GAKO14976 1311 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 TNKSO95271 1327 aa8.47□□□□□ -1.05
ATXN3-221ENST00000553498 TNRC6CQ9HCJ0 1690 aaKnown RBP8.46□□□□□ -1.05
ATXN3-221ENST00000553498 A0A1W2PQ27 194 aa8.46□□□□□ -1.06
ATXN3-221ENST00000553498 A0A1W2PQ64 194 aa8.46□□□□□ -1.06
ATXN3-221ENST00000553498 A0A1W2PQD8 194 aa8.46□□□□□ -1.06
ATXN3-221ENST00000553498 SYCE3A1L190 88 aa8.46□□□□□ -1.06
ATXN3-221ENST00000553498 CFAP99D6REC4 459 aa8.46□□□□□ -1.06
ATXN3-221ENST00000553498 H0YIN7 160 aa8.46□□□□□ -1.06
ATXN3-221ENST00000553498 GDF9O60383 454 aa8.46□□□□□ -1.06
ATXN3-221ENST00000553498 GFRA3O60609 400 aa8.46□□□□□ -1.06
ATXN3-221ENST00000553498 LILRB3O75022 631 aa8.46□□□□□ -1.06
ATXN3-221ENST00000553498 U2AF2P26368 475 aaKnown RBP eCLIP8.46□□□□□ -1.06
ATXN3-221ENST00000553498 KIF5BP33176 963 aa8.46□□□□□ -1.06
ATXN3-221ENST00000553498 ADD1P35611 737 aaKnown RBP8.46□□□□□ -1.06
ATXN3-221ENST00000553498 GNAQP50148 359 aa8.46□□□□□ -1.06
ATXN3-221ENST00000553498 AKAP17AQ02040 695 aaKnown RBP8.46□□□□□ -1.06
ATXN3-221ENST00000553498 FOXD4L6Q3SYB3 417 aaPredicted RBP8.46□□□□□ -1.06
ATXN3-221ENST00000553498 RRP12Q5JTH9 1297 aaKnown RBP8.46□□□□□ -1.06
ATXN3-221ENST00000553498 ZNF697Q5TEC3 545 aa8.46□□□□□ -1.06
ATXN3-221ENST00000553498 DESI1Q6ICB0 168 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms