RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 IRF5Q13568 498 aa9.84□□□□□ -0.83
PCNX1-204ENST00000553428 COG2Q14746 738 aa9.84□□□□□ -0.83
PCNX1-204ENST00000553428 SLC9C1Q4G0N8 1177 aa9.84□□□□□ -0.83
PCNX1-204ENST00000553428 VPS53Q5VIR6 699 aa9.84□□□□□ -0.83
PCNX1-204ENST00000553428 ZNF589Q86UQ0 364 aaPredicted RBP9.84□□□□□ -0.83
PCNX1-204ENST00000553428 MB21D1Q8N884 522 aa9.84□□□□□ -0.83
PCNX1-204ENST00000553428 NEDD1Q8NHV4 660 aa9.84□□□□□ -0.83
PCNX1-204ENST00000553428 RUFY2Q8WXA3 655 aa9.84□□□□□ -0.83
PCNX1-204ENST00000553428 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.84□□□□□ -0.83
PCNX1-204ENST00000553428 RPAP3Q9H6T3 665 aaPredicted RBP9.84□□□□□ -0.83
PCNX1-204ENST00000553428 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.84□□□□□ -0.83
PCNX1-204ENST00000553428 PTCH2Q9Y6C5 1203 aa9.84□□□□□ -0.83
PCNX1-204ENST00000553428 IGKV6D-41A0A0C4DH26 115 aa9.83□□□□□ -0.84
PCNX1-204ENST00000553428 TTLL1O95922 423 aa9.83□□□□□ -0.84
PCNX1-204ENST00000553428 FGAP02671 866 aa9.83□□□□□ -0.84
PCNX1-204ENST00000553428 GSPT1P15170 499 aaKnown RBP9.83□□□□□ -0.84
PCNX1-204ENST00000553428 ERVK-9P63128 1117 aa9.83□□□□□ -0.84
PCNX1-204ENST00000553428 ERVK-24P63145 666 aa9.83□□□□□ -0.84
PCNX1-204ENST00000553428 CWC27Q6UX04 472 aaKnown RBP9.83□□□□□ -0.84
PCNX1-204ENST00000553428 RAET1EQ8TD07 263 aa9.83□□□□□ -0.84
PCNX1-204ENST00000553428 PXYLP1Q8TE99 480 aa9.83□□□□□ -0.84
PCNX1-204ENST00000553428 MKL1Q969V6 931 aa9.83□□□□□ -0.84
PCNX1-204ENST00000553428 DSCC1Q9BVC3 393 aa9.83□□□□□ -0.84
PCNX1-204ENST00000553428 MTMR4Q9NYA4 1195 aa9.83□□□□□ -0.84
PCNX1-204ENST00000553428 RBPJLQ9UBG7 517 aa9.83□□□□□ -0.84
PCNX1-204ENST00000553428 BAZ2AQ9UIF9 1905 aaKnown RBP9.82□□□□□ -0.84
PCNX1-204ENST00000553428 TSPY2A6NKD2 308 aa9.82□□□□□ -0.84
PCNX1-204ENST00000553428 SPDYE16A6NNV3 312 aaPredicted RBP9.82□□□□□ -0.84
PCNX1-204ENST00000553428 PRDM1O75626 825 aa9.82□□□□□ -0.84
PCNX1-204ENST00000553428 NEFLP07196 543 aa9.82□□□□□ -0.84
PCNX1-204ENST00000553428 GRK4P32298 578 aa9.82□□□□□ -0.84
PCNX1-204ENST00000553428 DSG3P32926 999 aa9.82□□□□□ -0.84
PCNX1-204ENST00000553428 TFAP4Q01664 338 aa9.82□□□□□ -0.84
PCNX1-204ENST00000553428 ATP2B2Q01814 1243 aa9.82□□□□□ -0.84
PCNX1-204ENST00000553428 PRKCZQ05513 592 aa9.82□□□□□ -0.84
PCNX1-204ENST00000553428 CLEC10AQ8IUN9 316 aa9.82□□□□□ -0.84
PCNX1-204ENST00000553428 CCAR1Q8IX12 1150 aaKnown RBP9.82□□□□□ -0.84
PCNX1-204ENST00000553428 STK11IPQ8N1F8 1099 aa9.82□□□□□ -0.84
PCNX1-204ENST00000553428 SLAIN1Q8ND83 568 aa9.82□□□□□ -0.84
PCNX1-204ENST00000553428 SOCS4Q8WXH5 440 aa9.82□□□□□ -0.84
PCNX1-204ENST00000553428 ZNF333Q96JL9 665 aa9.82□□□□□ -0.84
PCNX1-204ENST00000553428 TANGO6Q9C0B7 1094 aa9.82□□□□□ -0.84
PCNX1-204ENST00000553428 RNF41Q9H4P4 317 aaPredicted RBP9.82□□□□□ -0.84
PCNX1-204ENST00000553428 TXNRD2Q9NNW7 524 aa9.82□□□□□ -0.84
PCNX1-204ENST00000553428 CTNNA3Q9UI47 895 aa9.82□□□□□ -0.84
PCNX1-204ENST00000553428 FLOT1O75955 427 aa9.81□□□□□ -0.84
PCNX1-204ENST00000553428 CAPN2P17655 700 aa9.81□□□□□ -0.84
PCNX1-204ENST00000553428 FLT3LGP49771 235 aa9.81□□□□□ -0.84
PCNX1-204ENST00000553428 UBXN2AP68543 259 aa9.81□□□□□ -0.84
PCNX1-204ENST00000553428 CTDSPL2Q05D32 466 aa9.81□□□□□ -0.84
PCNX1-204ENST00000553428 KIAA1755Q5JYT7 1200 aa9.81□□□□□ -0.84
PCNX1-204ENST00000553428 TRMT44Q8IYL2 757 aaKnown RBP9.81□□□□□ -0.84
PCNX1-204ENST00000553428 SPICE1Q8N0Z3 855 aa9.81□□□□□ -0.84
PCNX1-204ENST00000553428 GMCL1P1Q8NEA9 526 aa9.81□□□□□ -0.84
PCNX1-204ENST00000553428 SHCBP1Q8NEM2 672 aa9.81□□□□□ -0.84
PCNX1-204ENST00000553428 STAG1Q8WVM7 1258 aa9.81□□□□□ -0.84
PCNX1-204ENST00000553428 CEP95Q96GE4 821 aa9.81□□□□□ -0.84
PCNX1-204ENST00000553428 NUDT12Q9BQG2 462 aa9.81□□□□□ -0.84
PCNX1-204ENST00000553428 PAGR1Q9BTK6 254 aa9.81□□□□□ -0.84
PCNX1-204ENST00000553428 TMEM106CQ9BVX2 250 aa9.81□□□□□ -0.84
PCNX1-204ENST00000553428 TCP11L1Q9NUJ3 509 aa9.81□□□□□ -0.84
PCNX1-204ENST00000553428 CLIP2Q9UDT6 1046 aa9.81□□□□□ -0.84
PCNX1-204ENST00000553428 F5H6K3 240 aa9.8□□□□□ -0.84
PCNX1-204ENST00000553428 ZNF213O14771 459 aa9.8□□□□□ -0.84
PCNX1-204ENST00000553428 RANBP6O60518 1105 aaKnown RBP9.8□□□□□ -0.84
PCNX1-204ENST00000553428 CNMDO75829 334 aa9.8□□□□□ -0.84
PCNX1-204ENST00000553428 CENPBP07199 599 aaPredicted RBP9.8□□□□□ -0.84
PCNX1-204ENST00000553428 XRCC5P13010 732 aaKnown RBP9.8□□□□□ -0.84
PCNX1-204ENST00000553428 CHMLP26374 656 aa9.8□□□□□ -0.84
PCNX1-204ENST00000553428 COPB2P35606 906 aa9.8□□□□□ -0.84
PCNX1-204ENST00000553428 NOVP48745 357 aa9.8□□□□□ -0.84
PCNX1-204ENST00000553428 KLRC3Q07444 240 aa9.8□□□□□ -0.84
PCNX1-204ENST00000553428 Q3C1V9 767 aa9.8□□□□□ -0.84
PCNX1-204ENST00000553428 CCDC178Q5BJE1 867 aa9.8□□□□□ -0.84
PCNX1-204ENST00000553428 FAM47AQ5JRC9 791 aa9.8□□□□□ -0.84
PCNX1-204ENST00000553428 AKNAD1Q5T1N1 836 aa9.8□□□□□ -0.84
PCNX1-204ENST00000553428 ERICH6BQ5W0A0 696 aa9.8□□□□□ -0.84
PCNX1-204ENST00000553428 POTEEQ6S8J3 1075 aa9.8□□□□□ -0.84
PCNX1-204ENST00000553428 MFSD6Q6ZSS7 791 aa9.8□□□□□ -0.84
PCNX1-204ENST00000553428 GPR142Q7Z601 462 aa9.8□□□□□ -0.84
PCNX1-204ENST00000553428 PLEKHH3Q7Z736 793 aa9.8□□□□□ -0.84
PCNX1-204ENST00000553428 GJD2Q9UKL4 321 aa9.8□□□□□ -0.84
PCNX1-204ENST00000553428 GABRQQ9UN88 632 aa9.8□□□□□ -0.84
PCNX1-204ENST00000553428 ADAMTS5Q9UNA0 930 aa9.8□□□□□ -0.84
PCNX1-204ENST00000553428 PCNTO95613 3336 aa9.79□□□□□ -0.84
PCNX1-204ENST00000553428 SLC15A5A6NIM6 579 aa9.79□□□□□ -0.84
PCNX1-204ENST00000553428 STRNO43815 780 aa9.79□□□□□ -0.84
PCNX1-204ENST00000553428 RAD21O60216 631 aa9.79□□□□□ -0.84
PCNX1-204ENST00000553428 ADCY3O60266 1144 aa9.79□□□□□ -0.84
PCNX1-204ENST00000553428 ECM2O94769 699 aaPredicted RBP9.79□□□□□ -0.84
PCNX1-204ENST00000553428 NDUFB10O96000 172 aa9.79□□□□□ -0.84
PCNX1-204ENST00000553428 FDX1P10109 184 aa9.79□□□□□ -0.84
PCNX1-204ENST00000553428 RGS2P41220 211 aa9.79□□□□□ -0.84
PCNX1-204ENST00000553428 IMMTQ16891 758 aaKnown RBP9.79□□□□□ -0.84
PCNX1-204ENST00000553428 BMP2KLQ5H9B9 411 aa9.79□□□□□ -0.84
PCNX1-204ENST00000553428 MORN1Q5T089 497 aa9.79□□□□□ -0.84
PCNX1-204ENST00000553428 FAM83BQ5T0W9 1011 aa9.79□□□□□ -0.84
PCNX1-204ENST00000553428 NKX2-3Q8TAU0 364 aa9.79□□□□□ -0.84
PCNX1-204ENST00000553428 ESR2Q92731 530 aa9.79□□□□□ -0.84
PCNX1-204ENST00000553428 GMCL1Q96IK5 515 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms