RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 SWAP70Q9UH65 585 aa9.52□□□□□ -0.89
RAB5B-210ENST00000553116 HDAC9Q9UKV0 1011 aa9.52□□□□□ -0.89
RAB5B-210ENST00000553116 A0A1B0GVL5 298 aa9.52□□□□□ -0.89
RAB5B-210ENST00000553116 PARP1P09874 1014 aaKnown RBP9.52□□□□□ -0.89
RAB5B-210ENST00000553116 SCG2P13521 617 aa9.52□□□□□ -0.89
RAB5B-210ENST00000553116 HDLBPQ00341 1268 aaKnown RBP9.52□□□□□ -0.89
RAB5B-210ENST00000553116 GRM4Q14833 912 aa9.52□□□□□ -0.89
RAB5B-210ENST00000553116 DALRD3Q5D0E6 543 aaKnown RBP9.52□□□□□ -0.89
RAB5B-210ENST00000553116 PSMD1Q99460 953 aa9.52□□□□□ -0.89
RAB5B-210ENST00000553116 TDRD3Q9H7E2 651 aaKnown RBP9.52□□□□□ -0.89
RAB5B-210ENST00000553116 TOP1P11387 765 aaKnown RBP9.51□□□□□ -0.89
RAB5B-210ENST00000553116 AKR1B1P15121 316 aa9.51□□□□□ -0.89
RAB5B-210ENST00000553116 FUT2Q10981 343 aa9.51□□□□□ -0.89
RAB5B-210ENST00000553116 PKN1Q16512 942 aa9.51□□□□□ -0.89
RAB5B-210ENST00000553116 ADALQ6DHV7 355 aa9.51□□□□□ -0.89
RAB5B-210ENST00000553116 HOMER1Q86YM7 354 aa9.51□□□□□ -0.89
RAB5B-210ENST00000553116 LRRC47Q8N1G4 583 aaKnown RBP9.51□□□□□ -0.89
RAB5B-210ENST00000553116 OXER1Q8TDS5 423 aa9.51□□□□□ -0.89
RAB5B-210ENST00000553116 CLSTN2Q9H4D0 955 aa9.51□□□□□ -0.89
RAB5B-210ENST00000553116 CABP5Q9NP86 173 aa9.51□□□□□ -0.89
RAB5B-210ENST00000553116 FAM196BA6NMK8 535 aa9.51□□□□□ -0.89
RAB5B-210ENST00000553116 PSMD14O00487 310 aa9.51□□□□□ -0.89
RAB5B-210ENST00000553116 KCNA3P22001 575 aa9.51□□□□□ -0.89
RAB5B-210ENST00000553116 FAM160A1Q05DH4 1040 aa9.51□□□□□ -0.89
RAB5B-210ENST00000553116 RILPL1Q5EBL4 403 aa9.51□□□□□ -0.89
RAB5B-210ENST00000553116 SASS6Q6UVJ0 657 aa9.51□□□□□ -0.89
RAB5B-210ENST00000553116 CLEC10AQ8IUN9 316 aa9.51□□□□□ -0.89
RAB5B-210ENST00000553116 ANKS1AQ92625 1134 aa9.51□□□□□ -0.89
RAB5B-210ENST00000553116 GPKOWQ92917 476 aaPredicted RBP eCLIP9.51□□□□□ -0.89
RAB5B-210ENST00000553116 MYO3BQ8WXR4 1341 aa9.51□□□□□ -0.89
RAB5B-210ENST00000553116 RSBN1LQ6PCB5 846 aaPredicted RBP9.51□□□□□ -0.89
RAB5B-210ENST00000553116 USP17L2Q6R6M4 530 aa9.51□□□□□ -0.89
RAB5B-210ENST00000553116 RASGRP2Q7LDG7 609 aa9.51□□□□□ -0.89
RAB5B-210ENST00000553116 HEATR3Q7Z4Q2 680 aa9.51□□□□□ -0.89
RAB5B-210ENST00000553116 ZFPM1Q8IX07 1006 aa9.51□□□□□ -0.89
RAB5B-210ENST00000553116 JDP2Q8WYK2 163 aa9.51□□□□□ -0.89
RAB5B-210ENST00000553116 TRIM44Q96DX7 344 aaPredicted RBP9.51□□□□□ -0.89
RAB5B-210ENST00000553116 SDF4Q9BRK5 362 aa9.51□□□□□ -0.89
RAB5B-210ENST00000553116 DHX36Q9H2U1 1008 aaKnown RBP9.51□□□□□ -0.89
RAB5B-210ENST00000553116 GOLPH3LQ9H4A5 285 aa9.51□□□□□ -0.89
RAB5B-210ENST00000553116 VAT1LQ9HCJ6 419 aa9.51□□□□□ -0.89
RAB5B-210ENST00000553116 NOL7Q9UMY1 257 aaKnown RBP9.51□□□□□ -0.89
RAB5B-210ENST00000553116 BCS1LQ9Y276 419 aa9.51□□□□□ -0.89
RAB5B-210ENST00000553116 PSDA5PKW4 1024 aaPredicted RBP9.5□□□□□ -0.89
RAB5B-210ENST00000553116 KLRF2D3W0D1 207 aa9.5□□□□□ -0.89
RAB5B-210ENST00000553116 TGFB2P61812 414 aa9.5□□□□□ -0.89
RAB5B-210ENST00000553116 SLC39A14Q15043 492 aa9.5□□□□□ -0.89
RAB5B-210ENST00000553116 ZRSR1Q15695 479 aaKnown RBP9.5□□□□□ -0.89
RAB5B-210ENST00000553116 CPVLQ9H3G5 476 aa9.5□□□□□ -0.89
RAB5B-210ENST00000553116 CLIP2Q9UDT6 1046 aa9.5□□□□□ -0.89
RAB5B-210ENST00000553116 SEC63Q9UGP8 760 aaKnown RBP9.5□□□□□ -0.89
RAB5B-210ENST00000553116 MAD2L2Q9UI95 211 aa9.5□□□□□ -0.89
RAB5B-210ENST00000553116 ZBTB12Q9Y330 459 aaPredicted RBP9.5□□□□□ -0.89
RAB5B-210ENST00000553116 CLRN2A0PK11 232 aa9.5□□□□□ -0.89
RAB5B-210ENST00000553116 SLURP2P0DP57 97 aa9.5□□□□□ -0.89
RAB5B-210ENST00000553116 GABPAQ06546 454 aa9.5□□□□□ -0.89
RAB5B-210ENST00000553116 DLGAP5Q15398 846 aa9.5□□□□□ -0.89
RAB5B-210ENST00000553116 PFKFB3Q16875 520 aaPredicted RBP9.5□□□□□ -0.89
RAB5B-210ENST00000553116 MAP3K14Q99558 947 aa9.5□□□□□ -0.89
RAB5B-210ENST00000553116 MRIQ9BWK5 157 aa9.5□□□□□ -0.89
RAB5B-210ENST00000553116 TAOK3Q9H2K8 898 aa9.5□□□□□ -0.89
RAB5B-210ENST00000553116 VEZTQ9HBM0 779 aa9.5□□□□□ -0.89
RAB5B-210ENST00000553116 PI4KBQ9UBF8 816 aa9.5□□□□□ -0.89
RAB5B-210ENST00000553116 CEP131Q9UPN4 1083 aa9.5□□□□□ -0.89
RAB5B-210ENST00000553116 TCP10L2B9ZVM9 353 aa9.49□□□□□ -0.89
RAB5B-210ENST00000553116 TTLL1O95922 423 aa9.49□□□□□ -0.89
RAB5B-210ENST00000553116 CCDC96Q2M329 555 aa9.49□□□□□ -0.89
RAB5B-210ENST00000553116 LZTS2Q9BRK4 669 aa9.49□□□□□ -0.89
RAB5B-210ENST00000553116 PHF20Q9BVI0 1012 aa9.49□□□□□ -0.89
RAB5B-210ENST00000553116 MTMR4Q9NYA4 1195 aa9.49□□□□□ -0.89
RAB5B-210ENST00000553116 FRMPD2Q68DX3 1309 aaPredicted RBP9.49□□□□□ -0.89
RAB5B-210ENST00000553116 A0A1W2PQ27 194 aa9.49□□□□□ -0.89
RAB5B-210ENST00000553116 A0A1W2PQ64 194 aa9.49□□□□□ -0.89
RAB5B-210ENST00000553116 A0A1W2PQD8 194 aa9.49□□□□□ -0.89
RAB5B-210ENST00000553116 DDTLA6NHG4 134 aaPredicted RBP9.49□□□□□ -0.89
RAB5B-210ENST00000553116 CALML3P27482 149 aa9.49□□□□□ -0.89
RAB5B-210ENST00000553116 SHMT1P34896 483 aa9.49□□□□□ -0.89
RAB5B-210ENST00000553116 CERKLQ49MI3 558 aaPredicted RBP9.49□□□□□ -0.89
RAB5B-210ENST00000553116 CCDC148Q8NFR7 591 aa9.49□□□□□ -0.89
RAB5B-210ENST00000553116 PRMT6Q96LA8 375 aaPredicted RBP9.49□□□□□ -0.89
RAB5B-210ENST00000553116 FAM198AQ9UFP1 575 aa9.49□□□□□ -0.89
RAB5B-210ENST00000553116 ZNRF3Q9ULT6 936 aa9.49□□□□□ -0.89
RAB5B-210ENST00000553116 USP17L5A8MUK1 530 aa9.49□□□□□ -0.89
RAB5B-210ENST00000553116 NDUFA8P51970 172 aa9.49□□□□□ -0.89
RAB5B-210ENST00000553116 TYRO3Q06418 890 aa9.49□□□□□ -0.89
RAB5B-210ENST00000553116 CCDC173Q0VFZ6 552 aa9.49□□□□□ -0.89
RAB5B-210ENST00000553116 CSRNP1Q96S65 589 aa9.49□□□□□ -0.89
RAB5B-210ENST00000553116 IDI2Q9BXS1 227 aa9.49□□□□□ -0.89
RAB5B-210ENST00000553116 MYH4Q9Y623 1939 aa9.49□□□□□ -0.89
RAB5B-210ENST00000553116 KIF13BQ9NQT8 1826 aa9.48□□□□□ -0.89
RAB5B-210ENST00000553116 FAM205CA6NFA0 338 aa9.48□□□□□ -0.89
RAB5B-210ENST00000553116 TRIM75PA6NK02 468 aa9.48□□□□□ -0.89
RAB5B-210ENST00000553116 CTAGE5O15320 804 aa9.48□□□□□ -0.89
RAB5B-210ENST00000553116 PPP6R2O75170 966 aa9.48□□□□□ -0.89
RAB5B-210ENST00000553116 KRI1Q8N9T8 703 aaKnown RBP9.48□□□□□ -0.89
RAB5B-210ENST00000553116 RRP36Q96EU6 259 aaKnown RBP9.48□□□□□ -0.89
RAB5B-210ENST00000553116 EHD4Q9H223 541 aa9.48□□□□□ -0.89
RAB5B-210ENST00000553116 PCDHB6Q9Y5E3 794 aa9.48□□□□□ -0.89
RAB5B-210ENST00000553116 PALM3A6NDB9 673 aaPredicted RBP9.48□□□□□ -0.89
RAB5B-210ENST00000553116 NAPAP54920 295 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms