RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 CRKP46108 304 aa10.43□□□□□ -0.74
RAB3IP-218ENST00000553099 BAG6P46379 1132 aa10.43□□□□□ -0.74
RAB3IP-218ENST00000553099 NT5C2P49902 561 aa10.43□□□□□ -0.74
RAB3IP-218ENST00000553099 EIF6P56537 245 aaKnown RBP10.43□□□□□ -0.74
RAB3IP-218ENST00000553099 GRM4Q14833 912 aa10.43□□□□□ -0.74
RAB3IP-218ENST00000553099 PFKFB3Q16875 520 aaPredicted RBP10.43□□□□□ -0.74
RAB3IP-218ENST00000553099 NOM1Q5C9Z4 860 aaKnown RBP10.43□□□□□ -0.74
RAB3IP-218ENST00000553099 CDC42EP5Q6NZY7 148 aa10.43□□□□□ -0.74
RAB3IP-218ENST00000553099 CPVLQ9H3G5 476 aa10.43□□□□□ -0.74
RAB3IP-218ENST00000553099 TCP11L1Q9NUJ3 509 aa10.43□□□□□ -0.74
RAB3IP-218ENST00000553099 MAD2L2Q9UI95 211 aa10.43□□□□□ -0.74
RAB3IP-218ENST00000553099 PCDHAC2Q9Y5I4 1007 aa10.43□□□□□ -0.74
RAB3IP-218ENST00000553099 CUTAO60888 179 aa10.43□□□□□ -0.74
RAB3IP-218ENST00000553099 GRIN1Q05586 938 aa10.43□□□□□ -0.74
RAB3IP-218ENST00000553099 ZSCAN30Q86W11 494 aa10.43□□□□□ -0.74
RAB3IP-218ENST00000553099 NEDD1Q8NHV4 660 aa10.43□□□□□ -0.74
RAB3IP-218ENST00000553099 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.43□□□□□ -0.74
RAB3IP-218ENST00000553099 CCDC39Q9UFE4 941 aa10.43□□□□□ -0.74
RAB3IP-218ENST00000553099 CEP131Q9UPN4 1083 aa10.43□□□□□ -0.74
RAB3IP-218ENST00000553099 AP5Z1O43299 807 aa10.42□□□□□ -0.74
RAB3IP-218ENST00000553099 TCP10Q12799 353 aa10.42□□□□□ -0.74
RAB3IP-218ENST00000553099 NFIAQ12857 509 aa10.42□□□□□ -0.74
RAB3IP-218ENST00000553099 PIK3AP1Q6ZUJ8 805 aa10.42□□□□□ -0.74
RAB3IP-218ENST00000553099 HOMER1Q86YM7 354 aa10.42□□□□□ -0.74
RAB3IP-218ENST00000553099 CLEC10AQ8IUN9 316 aa10.42□□□□□ -0.74
RAB3IP-218ENST00000553099 OSBPL5Q9H0X9 879 aaPredicted RBP10.42□□□□□ -0.74
RAB3IP-218ENST00000553099 SERPINB13Q9UIV8 391 aa10.42□□□□□ -0.74
RAB3IP-218ENST00000553099 NOL7Q9UMY1 257 aaKnown RBP10.42□□□□□ -0.74
RAB3IP-218ENST00000553099 TRIM75PA6NK02 468 aa10.42□□□□□ -0.74
RAB3IP-218ENST00000553099 BECN2A8MW95 431 aa10.42□□□□□ -0.74
RAB3IP-218ENST00000553099 GOLGA6L19H0YKK7 550 aa10.42□□□□□ -0.74
RAB3IP-218ENST00000553099 PPIP5K2O43314 1243 aa10.42□□□□□ -0.74
RAB3IP-218ENST00000553099 GNAQP50148 359 aa10.42□□□□□ -0.74
RAB3IP-218ENST00000553099 RESP18Q5W5W9 173 aa10.42□□□□□ -0.74
RAB3IP-218ENST00000553099 APOBEC3HQ6NTF7 200 aaKnown RBP10.42□□□□□ -0.74
RAB3IP-218ENST00000553099 USP17L2Q6R6M4 530 aa10.42□□□□□ -0.74
RAB3IP-218ENST00000553099 HHIPL2Q6UWX4 724 aa10.42□□□□□ -0.74
RAB3IP-218ENST00000553099 HEATR3Q7Z4Q2 680 aa10.42□□□□□ -0.74
RAB3IP-218ENST00000553099 ANKS1AQ92625 1134 aa10.42□□□□□ -0.74
RAB3IP-218ENST00000553099 ANO10Q9NW15 660 aa10.42□□□□□ -0.74
RAB3IP-218ENST00000553099 KIAA1468Q9P260 1216 aa10.42□□□□□ -0.74
RAB3IP-218ENST00000553099 MYH4Q9Y623 1939 aa10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 KLRF2D3W0D1 207 aa10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 MPHOSPH10O00566 681 aaKnown RBP10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 HLA-DOAP06340 250 aa10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 PARP1P09874 1014 aaKnown RBP10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 SLURP2P0DP57 97 aa10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 AKR1B1P15121 316 aa10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 NPY5RQ15761 445 aa10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 STRIP1Q5VSL9 837 aa10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 ISM2Q6H9L7 571 aa10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 ZSCAN29Q8IWY8 852 aaPredicted RBP10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 SPC24Q8NBT2 197 aa10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 KCNH3Q9ULD8 1083 aa10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 WNT7AO00755 349 aa10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 CYTH3O43739 400 aa10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 ATP2B2Q01814 1243 aa10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 ZNF174Q15697 407 aa10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 DACT2Q5SW24 774 aa10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 CEP57L1Q8IYX8 460 aa10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 LRRC47Q8N1G4 583 aaKnown RBP10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 PDILTQ8N807 584 aa10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 CNNM3Q8NE01 707 aa10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 TRIM5Q9C035 493 aa10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 VAT1LQ9HCJ6 419 aa10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 FAM13BQ9NYF5 915 aa10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 FBXO2Q9UK22 296 aaPredicted RBP10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 HPSEQ9Y251 543 aa10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 FAM196BA6NMK8 535 aa10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 CAVIN2O95810 425 aa10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 TOP1P11387 765 aaKnown RBP10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 PTPREP23469 700 aa10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 HS1BP3Q53T59 392 aa10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 RASGRP4Q8TDF6 673 aa10.41□□□□□ -0.74
RAB3IP-218ENST00000553099 FRMPD2Q68DX3 1309 aaPredicted RBP10.4□□□□□ -0.74
RAB3IP-218ENST00000553099 PALM3A6NDB9 673 aaPredicted RBP10.4□□□□□ -0.74
RAB3IP-218ENST00000553099 ADAMTS3O15072 1205 aa10.4□□□□□ -0.74
RAB3IP-218ENST00000553099 GABPAQ06546 454 aa10.4□□□□□ -0.74
RAB3IP-218ENST00000553099 KIAA2012Q0VF49 1180 aa10.4□□□□□ -0.74
RAB3IP-218ENST00000553099 PNOCQ13519 176 aa10.4□□□□□ -0.74
RAB3IP-218ENST00000553099 SLC35G1Q2M3R5 365 aa10.4□□□□□ -0.74
RAB3IP-218ENST00000553099 DPCR1Q3MIW9 517 aa10.4□□□□□ -0.74
RAB3IP-218ENST00000553099 TTC38Q5R3I4 469 aa10.4□□□□□ -0.74
RAB3IP-218ENST00000553099 WWC2Q6AWC2 1192 aa10.4□□□□□ -0.74
RAB3IP-218ENST00000553099 ZFPM1Q8IX07 1006 aa10.4□□□□□ -0.74
RAB3IP-218ENST00000553099 ZDHHC15Q96MV8 337 aa10.4□□□□□ -0.74
RAB3IP-218ENST00000553099 CSRNP2Q9H175 543 aa10.4□□□□□ -0.74
RAB3IP-218ENST00000553099 ZNF646O15015 1829 aaPredicted RBP10.4□□□□□ -0.75
RAB3IP-218ENST00000553099 RAD21O60216 631 aa10.4□□□□□ -0.75
RAB3IP-218ENST00000553099 CALML3P27482 149 aa10.4□□□□□ -0.75
RAB3IP-218ENST00000553099 LONRF3Q496Y0 759 aa10.4□□□□□ -0.75
RAB3IP-218ENST00000553099 TYW1BQ6NUM6 668 aa10.4□□□□□ -0.75
RAB3IP-218ENST00000553099 BLIDQ8IZY5 108 aa10.4□□□□□ -0.75
RAB3IP-218ENST00000553099 AOPEPQ8N6M6 819 aa10.4□□□□□ -0.75
RAB3IP-218ENST00000553099 C7orf43Q8WVR3 580 aa10.4□□□□□ -0.75
RAB3IP-218ENST00000553099 TNFRSF25Q93038 417 aa10.4□□□□□ -0.75
RAB3IP-218ENST00000553099 ZNF830Q96NB3 372 aaPredicted RBP10.4□□□□□ -0.75
RAB3IP-218ENST00000553099 NAT10Q9H0A0 1025 aaKnown RBP10.4□□□□□ -0.75
RAB3IP-218ENST00000553099 MTMR4Q9NYA4 1195 aa10.4□□□□□ -0.75
RAB3IP-218ENST00000553099 SRPRBQ9Y5M8 271 aaKnown RBP10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms