RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 WDR78Q5VTH9 848 aa14.33□□□□□ -0.12
CKAP4-202ENST00000552828 OLFML2BQ68BL8 750 aa14.33□□□□□ -0.12
CKAP4-202ENST00000552828 SHCBP1Q8NEM2 672 aa14.33□□□□□ -0.12
CKAP4-202ENST00000552828 TRPV1Q8NER1 839 aa14.33□□□□□ -0.12
CKAP4-202ENST00000552828 MOV10L1Q9BXT6 1211 aaKnown RBP14.33□□□□□ -0.12
CKAP4-202ENST00000552828 SWAP70Q9UH65 585 aa14.33□□□□□ -0.12
CKAP4-202ENST00000552828 ZNF532Q9HCE3 1301 aa14.33□□□□□ -0.12
CKAP4-202ENST00000552828 DNM1LO00429 736 aa14.32□□□□□ -0.12
CKAP4-202ENST00000552828 CYBAP13498 195 aa14.32□□□□□ -0.12
CKAP4-202ENST00000552828 CYP2C19P33261 490 aa14.32□□□□□ -0.12
CKAP4-202ENST00000552828 RRP1P56182 461 aaKnown RBP14.32□□□□□ -0.12
CKAP4-202ENST00000552828 TMEM179Q6ZVK1 233 aa14.32□□□□□ -0.12
CKAP4-202ENST00000552828 SIAH1Q8IUQ4 282 aa14.32□□□□□ -0.12
CKAP4-202ENST00000552828 RPAP2Q8IXW5 612 aaPredicted RBP14.32□□□□□ -0.12
CKAP4-202ENST00000552828 CLASRPQ8N2M8 674 aaKnown RBP14.32□□□□□ -0.12
CKAP4-202ENST00000552828 LCORLQ8N3X6 602 aa14.32□□□□□ -0.12
CKAP4-202ENST00000552828 MB21D1Q8N884 522 aa14.32□□□□□ -0.12
CKAP4-202ENST00000552828 KIF1BPQ96EK5 621 aa14.32□□□□□ -0.12
CKAP4-202ENST00000552828 SENP6Q9GZR1 1112 aaPredicted RBP14.32□□□□□ -0.12
CKAP4-202ENST00000552828 SPATC1LQ9H0A9 340 aa14.32□□□□□ -0.12
CKAP4-202ENST00000552828 MTMR10Q9NXD2 777 aa14.32□□□□□ -0.12
CKAP4-202ENST00000552828 STXBP5LQ9Y2K9 1186 aa14.32□□□□□ -0.12
CKAP4-202ENST00000552828 GOLIM4O00461 696 aa14.31□□□□□ -0.12
CKAP4-202ENST00000552828 DLL1O00548 723 aa14.31□□□□□ -0.12
CKAP4-202ENST00000552828 CENPBP07199 599 aaPredicted RBP14.31□□□□□ -0.12
CKAP4-202ENST00000552828 ADORA2AP29274 412 aa14.31□□□□□ -0.12
CKAP4-202ENST00000552828 KIAA1755Q5JYT7 1200 aa14.31□□□□□ -0.12
CKAP4-202ENST00000552828 Q7L0L9 218 aa14.31□□□□□ -0.12
CKAP4-202ENST00000552828 DPP9Q86TI2 863 aa14.31□□□□□ -0.12
CKAP4-202ENST00000552828 ABRAQ8N0Z2 381 aa14.31□□□□□ -0.12
CKAP4-202ENST00000552828 SDR42E1Q8WUS8 393 aa14.31□□□□□ -0.12
CKAP4-202ENST00000552828 TMX2Q9Y320 296 aa14.31□□□□□ -0.12
CKAP4-202ENST00000552828 MPHOSPH10O00566 681 aaKnown RBP14.3□□□□□ -0.12
CKAP4-202ENST00000552828 COBLO75128 1261 aa14.3□□□□□ -0.12
CKAP4-202ENST00000552828 IFIT2P09913 472 aaKnown RBP14.3□□□□□ -0.12
CKAP4-202ENST00000552828 CYP2D6P10635 497 aa14.3□□□□□ -0.12
CKAP4-202ENST00000552828 ERCC3P19447 782 aa14.3□□□□□ -0.12
CKAP4-202ENST00000552828 CNGA1P29973 690 aa14.3□□□□□ -0.12
CKAP4-202ENST00000552828 DSG3P32926 999 aa14.3□□□□□ -0.12
CKAP4-202ENST00000552828 MDM2Q00987 491 aaPredicted RBP14.3□□□□□ -0.12
CKAP4-202ENST00000552828 FAM109BQ6ICB4 259 aaPredicted RBP14.3□□□□□ -0.12
CKAP4-202ENST00000552828 SIRT2Q8IXJ6 389 aa14.3□□□□□ -0.12
CKAP4-202ENST00000552828 SLC44A5Q8NCS7 719 aa14.3□□□□□ -0.12
CKAP4-202ENST00000552828 ARRDC4Q8NCT1 418 aa14.3□□□□□ -0.12
CKAP4-202ENST00000552828 TANGO6Q9C0B7 1094 aa14.3□□□□□ -0.12
CKAP4-202ENST00000552828 MROH8Q9H579 483 aa14.3□□□□□ -0.12
CKAP4-202ENST00000552828 ATP8A2Q9NTI2 1148 aa14.3□□□□□ -0.12
CKAP4-202ENST00000552828 ZBTB40Q9NUA8 1239 aa14.3□□□□□ -0.12
CKAP4-202ENST00000552828 POTEB2H3BUK9 544 aa14.29□□□□□ -0.12
CKAP4-202ENST00000552828 SEPT4O43236 478 aa14.29□□□□□ -0.12
CKAP4-202ENST00000552828 RAB11FIP3O75154 756 aa14.29□□□□□ -0.12
CKAP4-202ENST00000552828 HMMRO75330 724 aa14.29□□□□□ -0.12
CKAP4-202ENST00000552828 ATP5JP18859 108 aa14.29□□□□□ -0.12
CKAP4-202ENST00000552828 ADD2P35612 726 aa14.29□□□□□ -0.12
CKAP4-202ENST00000552828 DYNLL2Q96FJ2 89 aa14.29□□□□□ -0.12
CKAP4-202ENST00000552828 CCDC17Q96LX7 622 aa14.29□□□□□ -0.12
CKAP4-202ENST00000552828 DNAJC2Q99543 621 aaKnown RBP14.29□□□□□ -0.12
CKAP4-202ENST00000552828 ARMT1Q9H993 441 aa14.29□□□□□ -0.12
CKAP4-202ENST00000552828 PAG1Q9NWQ8 432 aa14.29□□□□□ -0.12
CKAP4-202ENST00000552828 SLC5A4Q9NY91 659 aa14.29□□□□□ -0.12
CKAP4-202ENST00000552828 ADAMTS5Q9UNA0 930 aa14.29□□□□□ -0.12
CKAP4-202ENST00000552828 ZNF236Q9UL36 1845 aa14.29□□□□□ -0.12
CKAP4-202ENST00000552828 UNC80Q8N2C7 3258 aa14.28□□□□□ -0.12
CKAP4-202ENST00000552828 PRKAB2O43741 272 aa14.28□□□□□ -0.12
CKAP4-202ENST00000552828 AKR1B1P15121 316 aa14.28□□□□□ -0.12
CKAP4-202ENST00000552828 ATN1P54259 1190 aaPredicted RBP14.28□□□□□ -0.12
CKAP4-202ENST00000552828 SNX17Q15036 470 aa14.28□□□□□ -0.12
CKAP4-202ENST00000552828 C12orf60Q5U649 245 aa14.28□□□□□ -0.12
CKAP4-202ENST00000552828 LBHD1Q9BQE6 289 aaPredicted RBP14.28□□□□□ -0.12
CKAP4-202ENST00000552828 SH2D4AQ9H788 454 aa14.28□□□□□ -0.12
CKAP4-202ENST00000552828 VCPKMTQ9H867 229 aa14.28□□□□□ -0.12
CKAP4-202ENST00000552828 ARHGEF10LQ9HCE6 1279 aa14.28□□□□□ -0.12
CKAP4-202ENST00000552828 A0A0G2JMZ2 1700 aa14.27□□□□□ -0.12
CKAP4-202ENST00000552828 WDR46O15213 610 aaKnown RBP14.27□□□□□ -0.13
CKAP4-202ENST00000552828 FLOT1O75955 427 aa14.27□□□□□ -0.13
CKAP4-202ENST00000552828 MBD4O95243 580 aa14.27□□□□□ -0.13
CKAP4-202ENST00000552828 CDK8P49336 464 aa14.27□□□□□ -0.13
CKAP4-202ENST00000552828 RTP1P59025 263 aa14.27□□□□□ -0.13
CKAP4-202ENST00000552828 ICA1Q05084 483 aa14.27□□□□□ -0.13
CKAP4-202ENST00000552828 GJC2Q5T442 439 aaPredicted RBP14.27□□□□□ -0.13
CKAP4-202ENST00000552828 C1orf53Q5VUE5 145 aa14.27□□□□□ -0.13
CKAP4-202ENST00000552828 SLC39A5Q6ZMH5 540 aa14.27□□□□□ -0.13
CKAP4-202ENST00000552828 ATG4CQ96DT6 458 aa14.27□□□□□ -0.13
CKAP4-202ENST00000552828 HAUS7Q99871 368 aa14.27□□□□□ -0.13
CKAP4-202ENST00000552828 NRBP1Q9UHY1 535 aa14.27□□□□□ -0.13
CKAP4-202ENST00000552828 RLFQ13129 1914 aa14.27□□□□□ -0.13
CKAP4-202ENST00000552828 NAV1Q8NEY1 1877 aa14.27□□□□□ -0.13
CKAP4-202ENST00000552828 SMIM22K7EJ46 135 aa14.26□□□□□ -0.13
CKAP4-202ENST00000552828 APBB1O00213 710 aa14.26□□□□□ -0.13
CKAP4-202ENST00000552828 SLC25A27O95847 323 aa14.26□□□□□ -0.13
CKAP4-202ENST00000552828 TMEM132BQ14DG7 1078 aa14.26□□□□□ -0.13
CKAP4-202ENST00000552828 UBE3CQ15386 1083 aa14.26□□□□□ -0.13
CKAP4-202ENST00000552828 SLFNL1Q499Z3 407 aa14.26□□□□□ -0.13
CKAP4-202ENST00000552828 C16orf86Q6ZW13 317 aa14.26□□□□□ -0.13
CKAP4-202ENST00000552828 CLEC10AQ8IUN9 316 aa14.26□□□□□ -0.13
CKAP4-202ENST00000552828 SPICE1Q8N0Z3 855 aa14.26□□□□□ -0.13
CKAP4-202ENST00000552828 MAML3Q96JK9 1138 aa14.26□□□□□ -0.13
CKAP4-202ENST00000552828 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.26□□□□□ -0.13
CKAP4-202ENST00000552828 BOLA2Q9H3K6 86 aa14.26□□□□□ -0.13
CKAP4-202ENST00000552828 KANSL2Q9H9L4 492 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms