RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 PI4K2BQ8TCG2 481 aa7.06□□□□□ -1.28
CCDC65-204ENST00000552188 EVI5LQ96CN4 794 aa7.06□□□□□ -1.28
CCDC65-204ENST00000552188 MKNK2Q9HBH9 465 aa7.06□□□□□ -1.28
CCDC65-204ENST00000552188 ZNF287Q9HBT7 754 aa7.06□□□□□ -1.28
CCDC65-204ENST00000552188 ARPP21Q9UBL0 812 aaPredicted RBP7.06□□□□□ -1.28
CCDC65-204ENST00000552188 CPA4Q9UI42 421 aa7.06□□□□□ -1.28
CCDC65-204ENST00000552188 FMNL1O95466 1100 aaPredicted RBP7.05□□□□□ -1.28
CCDC65-204ENST00000552188 CHGBP05060 677 aa7.05□□□□□ -1.28
CCDC65-204ENST00000552188 NEFLP07196 543 aa7.05□□□□□ -1.28
CCDC65-204ENST00000552188 SLC3A2P08195 630 aaKnown RBP7.05□□□□□ -1.28
CCDC65-204ENST00000552188 CYP2D6P10635 497 aa7.05□□□□□ -1.28
CCDC65-204ENST00000552188 HOXD10P28358 340 aa7.05□□□□□ -1.28
CCDC65-204ENST00000552188 USP14P54578 494 aa7.05□□□□□ -1.28
CCDC65-204ENST00000552188 MFAP1P55081 439 aaKnown RBP7.05□□□□□ -1.28
CCDC65-204ENST00000552188 IRX3P78415 501 aaPredicted RBP7.05□□□□□ -1.28
CCDC65-204ENST00000552188 ATP2B2Q01814 1243 aa7.05□□□□□ -1.28
CCDC65-204ENST00000552188 NUCB1Q02818 461 aa7.05□□□□□ -1.28
CCDC65-204ENST00000552188 MTMR2Q13614 643 aa7.05□□□□□ -1.28
CCDC65-204ENST00000552188 RRP1BQ14684 758 aaKnown RBP7.05□□□□□ -1.28
CCDC65-204ENST00000552188 ZYXQ15942 572 aaKnown RBP7.05□□□□□ -1.28
CCDC65-204ENST00000552188 C12orf60Q5U649 245 aa7.05□□□□□ -1.28
CCDC65-204ENST00000552188 TATDN1Q6P1N9 297 aa7.05□□□□□ -1.28
CCDC65-204ENST00000552188 FBXO46Q6PJ61 603 aaPredicted RBP7.05□□□□□ -1.28
CCDC65-204ENST00000552188 USP17L2Q6R6M4 530 aa7.05□□□□□ -1.28
CCDC65-204ENST00000552188 METTL16Q86W50 562 aaKnown RBP7.05□□□□□ -1.28
CCDC65-204ENST00000552188 CCAR1Q8IX12 1150 aaKnown RBP7.05□□□□□ -1.28
CCDC65-204ENST00000552188 OSBP2Q969R2 916 aa7.05□□□□□ -1.28
CCDC65-204ENST00000552188 CCDC17Q96LX7 622 aa7.05□□□□□ -1.28
CCDC65-204ENST00000552188 STRBPQ96SI9 672 aaKnown RBP7.05□□□□□ -1.28
CCDC65-204ENST00000552188 WDR18Q9BV38 432 aa7.05□□□□□ -1.28
CCDC65-204ENST00000552188 NAPBQ9H115 298 aa7.05□□□□□ -1.28
CCDC65-204ENST00000552188 DNAJC18Q9H819 358 aa7.05□□□□□ -1.28
CCDC65-204ENST00000552188 ARHGEF10LQ9HCE6 1279 aa7.05□□□□□ -1.28
CCDC65-204ENST00000552188 CWC22Q9HCG8 908 aaKnown RBP7.05□□□□□ -1.28
CCDC65-204ENST00000552188 STAP2Q9UGK3 403 aa7.05□□□□□ -1.28
CCDC65-204ENST00000552188 AGTPBP1Q9UPW5 1226 aa7.05□□□□□ -1.28
CCDC65-204ENST00000552188 SLC45A1Q9Y2W3 748 aa7.05□□□□□ -1.28
CCDC65-204ENST00000552188 PCDHGA10Q9Y5H3 936 aa7.05□□□□□ -1.28
CCDC65-204ENST00000552188 CYP2D7A0A087X1C5 515 aa7.04□□□□□ -1.28
CCDC65-204ENST00000552188 PATL2C9JE40 543 aaKnown RBP7.04□□□□□ -1.28
CCDC65-204ENST00000552188 M0R2C6 588 aa7.04□□□□□ -1.28
CCDC65-204ENST00000552188 RAD21O60216 631 aa7.04□□□□□ -1.28
CCDC65-204ENST00000552188 CYP2C8P10632 490 aa7.04□□□□□ -1.28
CCDC65-204ENST00000552188 SHMT1P34896 483 aa7.04□□□□□ -1.28
CCDC65-204ENST00000552188 CDK8P49336 464 aa7.04□□□□□ -1.28
CCDC65-204ENST00000552188 EMP3P54852 163 aa7.04□□□□□ -1.28
CCDC65-204ENST00000552188 BACE1P56817 501 aa7.04□□□□□ -1.28
CCDC65-204ENST00000552188 SH3D19Q5HYK7 790 aa7.04□□□□□ -1.28
CCDC65-204ENST00000552188 ZMYM1Q5SVZ6 1142 aa7.04□□□□□ -1.28
CCDC65-204ENST00000552188 TREML2Q5T2D2 321 aa7.04□□□□□ -1.28
CCDC65-204ENST00000552188 GPAT2Q6NUI2 795 aa7.04□□□□□ -1.28
CCDC65-204ENST00000552188 GIMAP6Q6P9H5 292 aa7.04□□□□□ -1.28
CCDC65-204ENST00000552188 TMEM179Q6ZVK1 233 aa7.04□□□□□ -1.28
CCDC65-204ENST00000552188 OTOP1Q7RTM1 612 aa7.04□□□□□ -1.28
CCDC65-204ENST00000552188 IFNL3Q8IZI9 196 aa7.04□□□□□ -1.28
CCDC65-204ENST00000552188 ZNF444Q8N0Y2 327 aaPredicted RBP7.04□□□□□ -1.28
CCDC65-204ENST00000552188 DYNLL2Q96FJ2 89 aa7.04□□□□□ -1.28
CCDC65-204ENST00000552188 SEC62Q99442 399 aaKnown RBP7.04□□□□□ -1.28
CCDC65-204ENST00000552188 SH2D4AQ9H788 454 aa7.04□□□□□ -1.28
CCDC65-204ENST00000552188 SALL3Q9BXA9 1300 aa7.03□□□□□ -1.28
CCDC65-204ENST00000552188 GSG1L2A8MUP6 293 aa7.03□□□□□ -1.28
CCDC65-204ENST00000552188 HIP1O00291 1037 aa7.03□□□□□ -1.28
CCDC65-204ENST00000552188 GNRH1P01148 92 aa7.03□□□□□ -1.28
CCDC65-204ENST00000552188 PSMC4P43686 418 aa7.03□□□□□ -1.28
CCDC65-204ENST00000552188 GCLCP48506 637 aaPredicted RBP7.03□□□□□ -1.28
CCDC65-204ENST00000552188 FCGRTP55899 365 aa7.03□□□□□ -1.28
CCDC65-204ENST00000552188 LACTBP83111 547 aaPredicted RBP7.03□□□□□ -1.28
CCDC65-204ENST00000552188 GABPAQ06546 454 aa7.03□□□□□ -1.28
CCDC65-204ENST00000552188 PDE4BQ07343 736 aa7.03□□□□□ -1.28
CCDC65-204ENST00000552188 MOGSQ13724 837 aa7.03□□□□□ -1.28
CCDC65-204ENST00000552188 SEPT2Q15019 361 aa7.03□□□□□ -1.28
CCDC65-204ENST00000552188 MCMDC2Q4G0Z9 681 aa7.03□□□□□ -1.28
CCDC65-204ENST00000552188 SBK1Q52WX2 424 aa7.03□□□□□ -1.28
CCDC65-204ENST00000552188 CTR9Q6PD62 1173 aa7.03□□□□□ -1.28
CCDC65-204ENST00000552188 C17orf99Q6UX52 265 aa7.03□□□□□ -1.28
CCDC65-204ENST00000552188 C16orf86Q6ZW13 317 aa7.03□□□□□ -1.28
CCDC65-204ENST00000552188 NBPF11Q86T75 865 aa7.03□□□□□ -1.28
CCDC65-204ENST00000552188 PLEKHM2Q8IWE5 1019 aa7.03□□□□□ -1.28
CCDC65-204ENST00000552188 SLC44A5Q8NCS7 719 aa7.03□□□□□ -1.28
CCDC65-204ENST00000552188 HELLSQ9NRZ9 838 aa7.03□□□□□ -1.28
CCDC65-204ENST00000552188 TOMM22Q9NS69 142 aa7.03□□□□□ -1.28
CCDC65-204ENST00000552188 DIAPH3Q9NSV4 1193 aa7.03□□□□□ -1.28
CCDC65-204ENST00000552188 HPS5Q9UPZ3 1129 aa7.03□□□□□ -1.28
CCDC65-204ENST00000552188 COL11A1P12107 1806 aaPredicted RBP7.03□□□□□ -1.28
CCDC65-204ENST00000552188 ZNFX1Q9P2E3 1918 aaKnown RBP7.03□□□□□ -1.28
CCDC65-204ENST00000552188 DOCK3Q8IZD9 2030 aa7.02□□□□□ -1.29
CCDC65-204ENST00000552188 FAM205CA6NFA0 338 aa7.02□□□□□ -1.29
CCDC65-204ENST00000552188 USP17L15C9J2P7 530 aa7.02□□□□□ -1.29
CCDC65-204ENST00000552188 USP17L13C9JLJ4 530 aa7.02□□□□□ -1.29
CCDC65-204ENST00000552188 USP17L11C9JVI0 530 aa7.02□□□□□ -1.29
CCDC65-204ENST00000552188 USP17L18D6R9N7 530 aa7.02□□□□□ -1.29
CCDC65-204ENST00000552188 USP17L22D6RA61 530 aa7.02□□□□□ -1.29
CCDC65-204ENST00000552188 USP17L17D6RBQ6 530 aa7.02□□□□□ -1.29
CCDC65-204ENST00000552188 USP17L19D6RCP7 530 aa7.02□□□□□ -1.29
CCDC65-204ENST00000552188 USP17L20D6RJB6 530 aa7.02□□□□□ -1.29
CCDC65-204ENST00000552188 TNPO2O14787 897 aaKnown RBP7.02□□□□□ -1.29
CCDC65-204ENST00000552188 MAP3K7O43318 606 aa7.02□□□□□ -1.29
CCDC65-204ENST00000552188 AKR1B1P15121 316 aa7.02□□□□□ -1.29
CCDC65-204ENST00000552188 FOSBP53539 338 aa7.02□□□□□ -1.29
CCDC65-204ENST00000552188 PRMT2P55345 433 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms