RNA–Protein interactions for RNA: ENST00000552089.5

RBFOX1-214, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-214ENST00000552089 ATG9AQ7Z3C6 839 aa14.33□□□□□ -0.11
RBFOX1-214ENST00000552089 TRPV1Q8NER1 839 aa14.33□□□□□ -0.11
RBFOX1-214ENST00000552089 USP26Q9BXU7 913 aa14.33□□□□□ -0.11
RBFOX1-214ENST00000552089 SLC28A3Q9HAS3 691 aa14.33□□□□□ -0.11
RBFOX1-214ENST00000552089 CWC22Q9HCG8 908 aaKnown RBP14.33□□□□□ -0.11
RBFOX1-214ENST00000552089 CIZ1Q9ULV3 898 aaPredicted RBP14.33□□□□□ -0.11
RBFOX1-214ENST00000552089 COG5Q9UP83 839 aa14.33□□□□□ -0.11
RBFOX1-214ENST00000552089 SUGT1Q9Y2Z0 365 aa14.33□□□□□ -0.11
RBFOX1-214ENST00000552089 USP34Q70CQ2 3546 aa14.33□□□□□ -0.11
RBFOX1-214ENST00000552089 DOCK2Q92608 1830 aa14.33□□□□□ -0.11
RBFOX1-214ENST00000552089 EYA2O00167 538 aa14.32□□□□□ -0.12
RBFOX1-214ENST00000552089 OS9Q13438 667 aaPredicted RBP14.32□□□□□ -0.12
RBFOX1-214ENST00000552089 METTL24Q5JXM2 366 aa14.32□□□□□ -0.12
RBFOX1-214ENST00000552089 ANO1Q5XXA6 986 aa14.32□□□□□ -0.12
RBFOX1-214ENST00000552089 VGLL2Q8N8G2 317 aa14.32□□□□□ -0.12
RBFOX1-214ENST00000552089 RUFY2Q8WXA3 655 aa14.32□□□□□ -0.12
RBFOX1-214ENST00000552089 TMEM39AQ9NV64 488 aa14.32□□□□□ -0.12
RBFOX1-214ENST00000552089 MROH5Q6ZUA9 1318 aa14.32□□□□□ -0.12
RBFOX1-214ENST00000552089 PQBP1O60828 265 aaKnown RBP14.32□□□□□ -0.12
RBFOX1-214ENST00000552089 CYP2C19P33261 490 aa14.32□□□□□ -0.12
RBFOX1-214ENST00000552089 RASIP1Q5U651 963 aa14.32□□□□□ -0.12
RBFOX1-214ENST00000552089 FBXO33Q7Z6M2 555 aa14.32□□□□□ -0.12
RBFOX1-214ENST00000552089 ZSCAN29Q8IWY8 852 aaPredicted RBP14.32□□□□□ -0.12
RBFOX1-214ENST00000552089 ZNF280CQ8ND82 737 aa14.32□□□□□ -0.12
RBFOX1-214ENST00000552089 EDC3Q96F86 508 aaKnown RBP14.32□□□□□ -0.12
RBFOX1-214ENST00000552089 TBC1D2Q9BYX2 928 aa14.32□□□□□ -0.12
RBFOX1-214ENST00000552089 IFIT2P09913 472 aaKnown RBP14.31□□□□□ -0.12
RBFOX1-214ENST00000552089 HERVK_113P62684 666 aa14.31□□□□□ -0.12
RBFOX1-214ENST00000552089 ERVK-9P63128 1117 aa14.31□□□□□ -0.12
RBFOX1-214ENST00000552089 ERVK-24P63145 666 aa14.31□□□□□ -0.12
RBFOX1-214ENST00000552089 ECHDC1Q9NTX5 307 aa14.31□□□□□ -0.12
RBFOX1-214ENST00000552089 USP40Q9NVE5 1235 aa14.31□□□□□ -0.12
RBFOX1-214ENST00000552089 YBX2Q9Y2T7 364 aaKnown RBP14.31□□□□□ -0.12
RBFOX1-214ENST00000552089 SMARCA5O60264 1052 aaPredicted RBP14.3□□□□□ -0.12
RBFOX1-214ENST00000552089 PDE8BO95263 885 aa14.3□□□□□ -0.12
RBFOX1-214ENST00000552089 CYBAP13498 195 aa14.3□□□□□ -0.12
RBFOX1-214ENST00000552089 ATP2B2Q01814 1243 aa14.3□□□□□ -0.12
RBFOX1-214ENST00000552089 MAP3K10Q02779 954 aa14.3□□□□□ -0.12
RBFOX1-214ENST00000552089 DIXDC1Q155Q3 683 aa14.3□□□□□ -0.12
RBFOX1-214ENST00000552089 TMEM240Q5SV17 173 aa14.3□□□□□ -0.12
RBFOX1-214ENST00000552089 CCDC174Q6PII3 467 aa14.3□□□□□ -0.12
RBFOX1-214ENST00000552089 SH3BP5LQ7L8J4 393 aa14.3□□□□□ -0.12
RBFOX1-214ENST00000552089 PAGR1Q9BTK6 254 aa14.3□□□□□ -0.12
RBFOX1-214ENST00000552089 GPR108Q9NPR9 543 aa14.3□□□□□ -0.12
RBFOX1-214ENST00000552089 RBPJLQ9UBG7 517 aa14.3□□□□□ -0.12
RBFOX1-214ENST00000552089 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.3□□□□□ -0.12
RBFOX1-214ENST00000552089 TRANK1O15050 2925 aa14.29□□□□□ -0.12
RBFOX1-214ENST00000552089 CIAO1O76071 339 aa14.29□□□□□ -0.12
RBFOX1-214ENST00000552089 PTMSP20962 102 aa14.29□□□□□ -0.12
RBFOX1-214ENST00000552089 Q3C1V9 767 aa14.29□□□□□ -0.12
RBFOX1-214ENST00000552089 SLC44A5Q8NCS7 719 aa14.29□□□□□ -0.12
RBFOX1-214ENST00000552089 NDUFB9Q9Y6M9 179 aa14.29□□□□□ -0.12
RBFOX1-214ENST00000552089 PPIGQ13427 754 aaKnown RBP eCLIP14.28□□□□□ -0.12
RBFOX1-214ENST00000552089 LRRC41Q15345 812 aa14.28□□□□□ -0.12
RBFOX1-214ENST00000552089 PPP2R2DQ66LE6 453 aa14.28□□□□□ -0.12
RBFOX1-214ENST00000552089 C16orf59Q7L2K0 433 aa14.28□□□□□ -0.12
RBFOX1-214ENST00000552089 HLA-CQ95604 372 aa14.28□□□□□ -0.12
RBFOX1-214ENST00000552089 EVI5LQ96CN4 794 aa14.28□□□□□ -0.12
RBFOX1-214ENST00000552089 CHMP5Q9NZZ3 219 aa14.28□□□□□ -0.12
RBFOX1-214ENST00000552089 TRIM6-TRIM34B2RNG4 842 aa14.27□□□□□ -0.12
RBFOX1-214ENST00000552089 APBB1O00213 710 aa14.27□□□□□ -0.12
RBFOX1-214ENST00000552089 GTPBP6O43824 516 aaPredicted RBP14.27□□□□□ -0.12
RBFOX1-214ENST00000552089 ENTPD3O75355 529 aa14.27□□□□□ -0.12
RBFOX1-214ENST00000552089 FGFR2P21802 821 aa14.27□□□□□ -0.12
RBFOX1-214ENST00000552089 CHMLP26374 656 aa14.27□□□□□ -0.12
RBFOX1-214ENST00000552089 IL15P40933 162 aaPredicted RBP14.27□□□□□ -0.12
RBFOX1-214ENST00000552089 CAVIN4Q5BKX8 364 aa14.27□□□□□ -0.12
RBFOX1-214ENST00000552089 SH3D19Q5HYK7 790 aa14.27□□□□□ -0.12
RBFOX1-214ENST00000552089 ESYT1Q9BSJ8 1104 aa14.27□□□□□ -0.12
RBFOX1-214ENST00000552089 MTCH2Q9Y6C9 303 aa14.27□□□□□ -0.12
RBFOX1-214ENST00000552089 C5orf42Q9H799 3197 aa14.26□□□□□ -0.13
RBFOX1-214ENST00000552089 DDTLA6NHG4 134 aaPredicted RBP14.26□□□□□ -0.13
RBFOX1-214ENST00000552089 TIMP1P01033 207 aa14.26□□□□□ -0.13
RBFOX1-214ENST00000552089 ALADP13716 330 aa14.26□□□□□ -0.13
RBFOX1-214ENST00000552089 FAAP100Q0VG06 881 aa14.26□□□□□ -0.13
RBFOX1-214ENST00000552089 TFCP2Q12800 502 aa14.26□□□□□ -0.13
RBFOX1-214ENST00000552089 PUM3Q15397 648 aaKnown RBP14.26□□□□□ -0.13
RBFOX1-214ENST00000552089 WDR78Q5VTH9 848 aa14.26□□□□□ -0.13
RBFOX1-214ENST00000552089 GJD3Q8N144 294 aa14.26□□□□□ -0.13
RBFOX1-214ENST00000552089 PI4K2BQ8TCG2 481 aa14.26□□□□□ -0.13
RBFOX1-214ENST00000552089 OTUD7AQ8TE49 926 aaPredicted RBP14.26□□□□□ -0.13
RBFOX1-214ENST00000552089 ANTXR1Q9H6X2 564 aa14.26□□□□□ -0.13
RBFOX1-214ENST00000552089 CEP126Q9P2H0 1117 aa14.26□□□□□ -0.13
RBFOX1-214ENST00000552089 PHF24Q9UPV7 400 aa14.26□□□□□ -0.13
RBFOX1-214ENST00000552089 RFX7Q2KHR2 1363 aa14.25□□□□□ -0.13
RBFOX1-214ENST00000552089 SLC15A5A6NIM6 579 aa14.25□□□□□ -0.13
RBFOX1-214ENST00000552089 FAM196BA6NMK8 535 aa14.25□□□□□ -0.13
RBFOX1-214ENST00000552089 K7ELQ4 463 aaPredicted RBP14.25□□□□□ -0.13
RBFOX1-214ENST00000552089 SEPT4O43236 478 aa14.25□□□□□ -0.13
RBFOX1-214ENST00000552089 HOXC6P09630 235 aa14.25□□□□□ -0.13
RBFOX1-214ENST00000552089 ACRP10323 421 aa14.25□□□□□ -0.13
RBFOX1-214ENST00000552089 HOXA7P31268 230 aaPredicted RBP14.25□□□□□ -0.13
RBFOX1-214ENST00000552089 MFSD5Q6N075 450 aa14.25□□□□□ -0.13
RBFOX1-214ENST00000552089 PSRC1Q6PGN9 363 aaPredicted RBP14.25□□□□□ -0.13
RBFOX1-214ENST00000552089 KIAA1211Q6ZU35 1233 aa14.25□□□□□ -0.13
RBFOX1-214ENST00000552089 ZNF365Q70YC5 407 aa14.25□□□□□ -0.13
RBFOX1-214ENST00000552089 NPLOC4Q8TAT6 608 aa14.25□□□□□ -0.13
RBFOX1-214ENST00000552089 ANKS1AQ92625 1134 aa14.25□□□□□ -0.13
RBFOX1-214ENST00000552089 KIF2CQ99661 725 aa14.25□□□□□ -0.13
RBFOX1-214ENST00000552089 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms