RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 CDC42EP5Q6NZY7 148 aa6.77□□□□□ -1.33
HOXB3-213ENST00000552000 HHIPL2Q6UWX4 724 aa6.77□□□□□ -1.33
HOXB3-213ENST00000552000 ZFPM1Q8IX07 1006 aa6.77□□□□□ -1.33
HOXB3-213ENST00000552000 PICK1Q9NRD5 415 aa6.77□□□□□ -1.33
HOXB3-213ENST00000552000 DAGLAQ9Y4D2 1042 aa6.77□□□□□ -1.33
HOXB3-213ENST00000552000 PHIPQ8WWQ0 1821 aa6.77□□□□□ -1.33
HOXB3-213ENST00000552000 MYH2Q9UKX2 1941 aa6.77□□□□□ -1.33
HOXB3-213ENST00000552000 PFASO15067 1338 aa6.76□□□□□ -1.33
HOXB3-213ENST00000552000 DOCK2Q92608 1830 aa6.76□□□□□ -1.33
HOXB3-213ENST00000552000 TRIM75PA6NK02 468 aa6.76□□□□□ -1.33
HOXB3-213ENST00000552000 RNF225M0QZC1 329 aaPredicted RBP6.76□□□□□ -1.33
HOXB3-213ENST00000552000 GRM8O00222 908 aa6.76□□□□□ -1.33
HOXB3-213ENST00000552000 GPR37O15354 613 aa6.76□□□□□ -1.33
HOXB3-213ENST00000552000 VSIG8P0DPA2 414 aa6.76□□□□□ -1.33
HOXB3-213ENST00000552000 PTPRAP18433 802 aa6.76□□□□□ -1.33
HOXB3-213ENST00000552000 DIXDC1Q155Q3 683 aa6.76□□□□□ -1.33
HOXB3-213ENST00000552000 FAM110CQ1W6H9 321 aa6.76□□□□□ -1.33
HOXB3-213ENST00000552000 CAVIN4Q5BKX8 364 aa6.76□□□□□ -1.33
HOXB3-213ENST00000552000 BEND3Q5T5X7 828 aa6.76□□□□□ -1.33
HOXB3-213ENST00000552000 MRPL14Q6P1L8 145 aaKnown RBP6.76□□□□□ -1.33
HOXB3-213ENST00000552000 CCDC84Q86UT8 332 aaPredicted RBP6.76□□□□□ -1.33
HOXB3-213ENST00000552000 SCYL3Q8IZE3 742 aa6.76□□□□□ -1.33
HOXB3-213ENST00000552000 TMEM151AQ8N4L1 468 aa6.76□□□□□ -1.33
HOXB3-213ENST00000552000 MAFAQ8NHW3 353 aaPredicted RBP6.76□□□□□ -1.33
HOXB3-213ENST00000552000 PURBQ96QR8 312 aaKnown RBP6.76□□□□□ -1.33
HOXB3-213ENST00000552000 CDX2Q99626 313 aaPredicted RBP6.76□□□□□ -1.33
HOXB3-213ENST00000552000 C9orf78Q9NZ63 289 aaPredicted RBP6.76□□□□□ -1.33
HOXB3-213ENST00000552000 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.76□□□□□ -1.33
HOXB3-213ENST00000552000 RAPGEFL1Q9UHV5 662 aa6.76□□□□□ -1.33
HOXB3-213ENST00000552000 OGDHLQ9ULD0 1010 aa6.76□□□□□ -1.33
HOXB3-213ENST00000552000 SLC45A1Q9Y2W3 748 aa6.76□□□□□ -1.33
HOXB3-213ENST00000552000 SUGT1Q9Y2Z0 365 aa6.76□□□□□ -1.33
HOXB3-213ENST00000552000 AFG3L2Q9Y4W6 797 aa6.76□□□□□ -1.33
HOXB3-213ENST00000552000 PLXNB2O15031 1838 aa6.76□□□□□ -1.33
HOXB3-213ENST00000552000 MROH5Q6ZUA9 1318 aa6.76□□□□□ -1.33
HOXB3-213ENST00000552000 DOCK1Q14185 1865 aa6.75□□□□□ -1.33
HOXB3-213ENST00000552000 PHF20L1A8MW92 1017 aa6.75□□□□□ -1.33
HOXB3-213ENST00000552000 SLURP2P0DP57 97 aa6.75□□□□□ -1.33
HOXB3-213ENST00000552000 CYP2B6P20813 491 aa6.75□□□□□ -1.33
HOXB3-213ENST00000552000 ZEB1P37275 1124 aaPredicted RBP6.75□□□□□ -1.33
HOXB3-213ENST00000552000 GSK3AP49840 483 aa6.75□□□□□ -1.33
HOXB3-213ENST00000552000 LRRC26Q2I0M4 334 aa6.75□□□□□ -1.33
HOXB3-213ENST00000552000 LRRC24Q50LG9 513 aa6.75□□□□□ -1.33
HOXB3-213ENST00000552000 METTL24Q5JXM2 366 aa6.75□□□□□ -1.33
HOXB3-213ENST00000552000 TREML2Q5T2D2 321 aa6.75□□□□□ -1.33
HOXB3-213ENST00000552000 TRIB2Q92519 343 aa6.75□□□□□ -1.33
HOXB3-213ENST00000552000 HLA-CQ95604 372 aa6.75□□□□□ -1.33
HOXB3-213ENST00000552000 USP40Q9NVE5 1235 aa6.75□□□□□ -1.33
HOXB3-213ENST00000552000 GJD2Q9UKL4 321 aa6.75□□□□□ -1.33
HOXB3-213ENST00000552000 AGTPBP1Q9UPW5 1226 aa6.75□□□□□ -1.33
HOXB3-213ENST00000552000 LRRFIP2Q9Y608 721 aaKnown RBP6.75□□□□□ -1.33
HOXB3-213ENST00000552000 CHD9Q3L8U1 2897 aa6.75□□□□□ -1.33
HOXB3-213ENST00000552000 ZDBF2Q9HCK1 2354 aa6.75□□□□□ -1.33
HOXB3-213ENST00000552000 SMCHD1A6NHR9 2005 aa6.74□□□□□ -1.33
HOXB3-213ENST00000552000 ATRNL1Q5VV63 1379 aa6.74□□□□□ -1.33
HOXB3-213ENST00000552000 HOXA2O43364 376 aa6.74□□□□□ -1.33
HOXB3-213ENST00000552000 GDF11O95390 407 aa6.74□□□□□ -1.33
HOXB3-213ENST00000552000 COL6A1P12109 1028 aa6.74□□□□□ -1.33
HOXB3-213ENST00000552000 RGS3P49796 1198 aa6.74□□□□□ -1.33
HOXB3-213ENST00000552000 ZSCAN29Q8IWY8 852 aaPredicted RBP6.74□□□□□ -1.33
HOXB3-213ENST00000552000 WDR66Q8TBY9 1149 aa6.74□□□□□ -1.33
HOXB3-213ENST00000552000 MYLIPQ8WY64 445 aa6.74□□□□□ -1.33
HOXB3-213ENST00000552000 SUCLG2Q96I99 432 aa6.74□□□□□ -1.33
HOXB3-213ENST00000552000 LBHD1Q9BQE6 289 aaPredicted RBP6.74□□□□□ -1.33
HOXB3-213ENST00000552000 SEMA6BQ9H3T3 888 aa6.74□□□□□ -1.33
HOXB3-213ENST00000552000 CHD7Q9P2D1 2997 aa6.74□□□□□ -1.33
HOXB3-213ENST00000552000 COL2A1P02458 1487 aaPredicted RBP6.73□□□□□ -1.33
HOXB3-213ENST00000552000 TCF20Q9UGU0 1960 aaKnown RBP6.73□□□□□ -1.33
HOXB3-213ENST00000552000 SOBPA7XYQ1 873 aa6.73□□□□□ -1.33
HOXB3-213ENST00000552000 CTNND1O60716 968 aaKnown RBP6.73□□□□□ -1.33
HOXB3-213ENST00000552000 PDE8BO95263 885 aa6.73□□□□□ -1.33
HOXB3-213ENST00000552000 ADH1CP00326 375 aa6.73□□□□□ -1.33
HOXB3-213ENST00000552000 IFIT1P09914 478 aaKnown RBP6.73□□□□□ -1.33
HOXB3-213ENST00000552000 PRDX5P30044 214 aa6.73□□□□□ -1.33
HOXB3-213ENST00000552000 GCLCP48506 637 aaPredicted RBP6.73□□□□□ -1.33
HOXB3-213ENST00000552000 SH3BP2P78314 561 aa6.73□□□□□ -1.33
HOXB3-213ENST00000552000 NNTQ13423 1086 aa6.73□□□□□ -1.33
HOXB3-213ENST00000552000 MAP3K21Q5TCX8 1036 aa6.73□□□□□ -1.33
HOXB3-213ENST00000552000 PTCRAQ6ISU1 281 aaPredicted RBP6.73□□□□□ -1.33
HOXB3-213ENST00000552000 SH3BP5LQ7L8J4 393 aa6.73□□□□□ -1.33
HOXB3-213ENST00000552000 VGLL2Q8N8G2 317 aa6.73□□□□□ -1.33
HOXB3-213ENST00000552000 SYMPKQ92797 1274 aaKnown RBP6.73□□□□□ -1.33
HOXB3-213ENST00000552000 KAZALD1Q96I82 304 aa6.73□□□□□ -1.33
HOXB3-213ENST00000552000 PRRC2BQ5JSZ5 2229 aaKnown RBP6.73□□□□□ -1.33
HOXB3-213ENST00000552000 PTPRZ1P23471 2315 aaPredicted RBP6.72□□□□□ -1.33
HOXB3-213ENST00000552000 FRMPD3Q5JV73 1810 aa6.72□□□□□ -1.33
HOXB3-213ENST00000552000 ATAD5Q96QE3 1844 aa6.72□□□□□ -1.33
HOXB3-213ENST00000552000 DDTLA6NHG4 134 aaPredicted RBP6.72□□□□□ -1.33
HOXB3-213ENST00000552000 FAM196BA6NMK8 535 aa6.72□□□□□ -1.33
HOXB3-213ENST00000552000 MAN1A2O60476 641 aa6.72□□□□□ -1.33
HOXB3-213ENST00000552000 PEX10O60683 326 aa6.72□□□□□ -1.33
HOXB3-213ENST00000552000 ENTPD3O75355 529 aa6.72□□□□□ -1.33
HOXB3-213ENST00000552000 ALDH1L1O75891 902 aa6.72□□□□□ -1.33
HOXB3-213ENST00000552000 LDHBP07195 334 aaKnown RBP6.72□□□□□ -1.33
HOXB3-213ENST00000552000 FOSL2P15408 326 aa6.72□□□□□ -1.33
HOXB3-213ENST00000552000 CCND3P30281 292 aaPredicted RBP6.72□□□□□ -1.33
HOXB3-213ENST00000552000 HMGCS2P54868 508 aa6.72□□□□□ -1.33
HOXB3-213ENST00000552000 GUCA2AQ02747 115 aa6.72□□□□□ -1.33
HOXB3-213ENST00000552000 CACNB2Q08289 660 aaPredicted RBP6.72□□□□□ -1.33
HOXB3-213ENST00000552000 SPP2Q13103 211 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms