RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 NOVP48745 357 aa19.36■□□□□ 0.69
GCN1-209ENST00000551920 STOX1Q6ZVD7 989 aa19.36■□□□□ 0.69
GCN1-209ENST00000551920 SH2D4AQ9H788 454 aa19.36■□□□□ 0.69
GCN1-209ENST00000551920 CLIP2Q9UDT6 1046 aa19.36■□□□□ 0.69
GCN1-209ENST00000551920 PNMA3Q9UL41 463 aa19.36■□□□□ 0.69
GCN1-209ENST00000551920 ZSWIM8A7E2V4 1837 aa19.36■□□□□ 0.69
GCN1-209ENST00000551920 B4E1Z4 1266 aa19.35■□□□□ 0.69
GCN1-209ENST00000551920 PEX10O60683 326 aa19.35■□□□□ 0.69
GCN1-209ENST00000551920 TTLL1O95922 423 aa19.35■□□□□ 0.69
GCN1-209ENST00000551920 IRX3P78415 501 aaPredicted RBP19.35■□□□□ 0.69
GCN1-209ENST00000551920 PABPC4Q13310 644 aaKnown RBP eCLIP19.35■□□□□ 0.69
GCN1-209ENST00000551920 CASC1Q6TDU7 716 aa19.35■□□□□ 0.69
GCN1-209ENST00000551920 KIAA1211Q6ZU35 1233 aa19.35■□□□□ 0.69
GCN1-209ENST00000551920 SMCR8Q8TEV9 937 aaPredicted RBP19.35■□□□□ 0.69
GCN1-209ENST00000551920 LPAR1Q92633 364 aa19.35■□□□□ 0.69
GCN1-209ENST00000551920 P2RX7Q99572 595 aaKnown RBP19.35■□□□□ 0.69
GCN1-209ENST00000551920 KDM4AO75164 1064 aa19.34■□□□□ 0.69
GCN1-209ENST00000551920 NDUFB10O96000 172 aa19.34■□□□□ 0.69
GCN1-209ENST00000551920 HERVK_113P62684 666 aa19.34■□□□□ 0.69
GCN1-209ENST00000551920 SP3Q02447 781 aa19.34■□□□□ 0.69
GCN1-209ENST00000551920 CATSPERGQ6ZRH7 1159 aa19.34■□□□□ 0.69
GCN1-209ENST00000551920 RASGRP2Q7LDG7 609 aa19.34■□□□□ 0.69
GCN1-209ENST00000551920 CD99L2Q8TCZ2 262 aa19.34■□□□□ 0.69
GCN1-209ENST00000551920 MKL1Q969V6 931 aa19.34■□□□□ 0.69
GCN1-209ENST00000551920 NUP88Q99567 741 aaPredicted RBP19.34■□□□□ 0.69
GCN1-209ENST00000551920 ARHGAP39Q9C0H5 1083 aa19.34■□□□□ 0.69
GCN1-209ENST00000551920 USP17L15C9J2P7 530 aa19.33■□□□□ 0.68
GCN1-209ENST00000551920 USP17L13C9JLJ4 530 aa19.33■□□□□ 0.68
GCN1-209ENST00000551920 USP17L11C9JVI0 530 aa19.33■□□□□ 0.68
GCN1-209ENST00000551920 USP17L18D6R9N7 530 aa19.33■□□□□ 0.68
GCN1-209ENST00000551920 USP17L22D6RA61 530 aa19.33■□□□□ 0.68
GCN1-209ENST00000551920 USP17L17D6RBQ6 530 aa19.33■□□□□ 0.68
GCN1-209ENST00000551920 USP17L19D6RCP7 530 aa19.33■□□□□ 0.68
GCN1-209ENST00000551920 USP17L20D6RJB6 530 aa19.33■□□□□ 0.68
GCN1-209ENST00000551920 OSBPP22059 807 aa19.33■□□□□ 0.68
GCN1-209ENST00000551920 CTGFP29279 349 aa19.33■□□□□ 0.68
GCN1-209ENST00000551920 USP17L24Q0WX57 530 aa19.33■□□□□ 0.68
GCN1-209ENST00000551920 COL9A3Q14050 684 aaPredicted RBP19.33■□□□□ 0.68
GCN1-209ENST00000551920 RCSD1Q6JBY9 416 aa19.33■□□□□ 0.68
GCN1-209ENST00000551920 ESR2Q92731 530 aa19.33■□□□□ 0.68
GCN1-209ENST00000551920 GOPCQ9HD26 462 aa19.33■□□□□ 0.68
GCN1-209ENST00000551920 TXNRD2Q9NNW7 524 aa19.33■□□□□ 0.68
GCN1-209ENST00000551920 STX8Q9UNK0 236 aa19.33■□□□□ 0.68
GCN1-209ENST00000551920 A0A0G2JMZ2 1700 aa19.32■□□□□ 0.68
GCN1-209ENST00000551920 RLFQ13129 1914 aa19.32■□□□□ 0.68
GCN1-209ENST00000551920 MYH4Q9Y623 1939 aa19.32■□□□□ 0.68
GCN1-209ENST00000551920 SPDYE16A6NNV3 312 aaPredicted RBP19.32■□□□□ 0.68
GCN1-209ENST00000551920 F5H6K3 240 aa19.32■□□□□ 0.68
GCN1-209ENST00000551920 SLC27A2O14975 620 aa19.32■□□□□ 0.68
GCN1-209ENST00000551920 WDR46O15213 610 aaKnown RBP19.32■□□□□ 0.68
GCN1-209ENST00000551920 KLRC3Q07444 240 aa19.32■□□□□ 0.68
GCN1-209ENST00000551920 NECTIN1Q15223 517 aa19.32■□□□□ 0.68
GCN1-209ENST00000551920 FAM83BQ5T0W9 1011 aa19.32■□□□□ 0.68
GCN1-209ENST00000551920 ANKRD13CQ8N6S4 541 aa19.32■□□□□ 0.68
GCN1-209ENST00000551920 GMCL1P1Q8NEA9 526 aa19.32■□□□□ 0.68
GCN1-209ENST00000551920 ZKSCAN3Q9BRR0 538 aa19.32■□□□□ 0.68
GCN1-209ENST00000551920 TANGO6Q9C0B7 1094 aa19.32■□□□□ 0.68
GCN1-209ENST00000551920 TCP11L1Q9NUJ3 509 aa19.32■□□□□ 0.68
GCN1-209ENST00000551920 SYNPO2Q9UMS6 1093 aa19.32■□□□□ 0.68
GCN1-209ENST00000551920 E7EWF7 191 aa19.31■□□□□ 0.68
GCN1-209ENST00000551920 RAD21O60216 631 aa19.31■□□□□ 0.68
GCN1-209ENST00000551920 LACTBP83111 547 aaPredicted RBP19.31■□□□□ 0.68
GCN1-209ENST00000551920 CREB3L3Q68CJ9 461 aa19.31■□□□□ 0.68
GCN1-209ENST00000551920 CYB5R4Q7L1T6 521 aa19.31■□□□□ 0.68
GCN1-209ENST00000551920 CNNM2Q9H8M5 875 aa19.31■□□□□ 0.68
GCN1-209ENST00000551920 FBXO28Q9NVF7 368 aa19.31■□□□□ 0.68
GCN1-209ENST00000551920 ZSWIM5Q9P217 1185 aa19.31■□□□□ 0.68
GCN1-209ENST00000551920 PARP14Q460N5 1801 aa19.3■□□□□ 0.68
GCN1-209ENST00000551920 CNMDO75829 334 aa19.3■□□□□ 0.68
GCN1-209ENST00000551920 ECM2O94769 699 aaPredicted RBP19.3■□□□□ 0.68
GCN1-209ENST00000551920 GCLCP48506 637 aaPredicted RBP19.3■□□□□ 0.68
GCN1-209ENST00000551920 FAM110CQ1W6H9 321 aa19.3■□□□□ 0.68
GCN1-209ENST00000551920 KRT23Q9C075 422 aa19.3■□□□□ 0.68
GCN1-209ENST00000551920 RBPJLQ9UBG7 517 aa19.3■□□□□ 0.68
GCN1-209ENST00000551920 MORF4L1Q9UBU8 362 aa19.3■□□□□ 0.68
GCN1-209ENST00000551920 LBX2Q6XYB7 198 aa19.29■□□□□ 0.68
GCN1-209ENST00000551920 CTU1Q7Z7A3 348 aaKnown RBP19.29■□□□□ 0.68
GCN1-209ENST00000551920 ERO1AQ96HE7 468 aa19.29■□□□□ 0.68
GCN1-209ENST00000551920 TRIM47Q96LD4 638 aa19.29■□□□□ 0.68
GCN1-209ENST00000551920 TMEM47Q9BQJ4 181 aa19.29■□□□□ 0.68
GCN1-209ENST00000551920 FLOT1O75955 427 aa19.28■□□□□ 0.68
GCN1-209ENST00000551920 NT5C2P49902 561 aa19.28■□□□□ 0.68
GCN1-209ENST00000551920 ANTXR2P58335 489 aa19.28■□□□□ 0.68
GCN1-209ENST00000551920 PPP4R3BQ5MIZ7 849 aa19.28■□□□□ 0.68
GCN1-209ENST00000551920 SLFN13Q68D06 897 aa19.28■□□□□ 0.68
GCN1-209ENST00000551920 OTOP1Q7RTM1 612 aa19.28■□□□□ 0.68
GCN1-209ENST00000551920 MB21D2Q8IYB1 491 aaPredicted RBP19.28■□□□□ 0.68
GCN1-209ENST00000551920 ENAHQ8N8S7 591 aaPredicted RBP19.28■□□□□ 0.68
GCN1-209ENST00000551920 CHMP4CQ96CF2 233 aa19.28■□□□□ 0.68
GCN1-209ENST00000551920 ATG4CQ96DT6 458 aa19.28■□□□□ 0.68
GCN1-209ENST00000551920 ZSCAN10Q96SZ4 725 aaPredicted RBP19.28■□□□□ 0.68
GCN1-209ENST00000551920 BTBD7Q9P203 1132 aa19.28■□□□□ 0.68
GCN1-209ENST00000551920 TNKSO95271 1327 aa19.27■□□□□ 0.68
GCN1-209ENST00000551920 TOP1P11387 765 aaKnown RBP19.27■□□□□ 0.68
GCN1-209ENST00000551920 COG2Q14746 738 aa19.27■□□□□ 0.68
GCN1-209ENST00000551920 RASEFQ8IZ41 740 aa19.27■□□□□ 0.68
GCN1-209ENST00000551920 GMCL1Q96IK5 515 aa19.27■□□□□ 0.68
GCN1-209ENST00000551920 PAGR1Q9BTK6 254 aa19.27■□□□□ 0.68
GCN1-209ENST00000551920 DSG3P32926 999 aa19.26■□□□□ 0.67
GCN1-209ENST00000551920 ERVK-9P63128 1117 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms