RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 NBPF11Q86T75 865 aa12.57□□□□□ -0.4
PTCH1-225ENST00000551845 SMCR8Q8TEV9 937 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-225ENST00000551845 C12orf42Q96LP6 360 aa12.57□□□□□ -0.4
PTCH1-225ENST00000551845 ESYT1Q9BSJ8 1104 aa12.57□□□□□ -0.4
PTCH1-225ENST00000551845 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.57□□□□□ -0.4
PTCH1-225ENST00000551845 NYAP2Q9P242 653 aa12.57□□□□□ -0.4
PTCH1-225ENST00000551845 CLIP2Q9UDT6 1046 aa12.57□□□□□ -0.4
PTCH1-225ENST00000551845 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.57□□□□□ -0.4
PTCH1-225ENST00000551845 USP17L15C9J2P7 530 aa12.56□□□□□ -0.4
PTCH1-225ENST00000551845 USP17L13C9JLJ4 530 aa12.56□□□□□ -0.4
PTCH1-225ENST00000551845 USP17L11C9JVI0 530 aa12.56□□□□□ -0.4
PTCH1-225ENST00000551845 USP17L18D6R9N7 530 aa12.56□□□□□ -0.4
PTCH1-225ENST00000551845 USP17L22D6RA61 530 aa12.56□□□□□ -0.4
PTCH1-225ENST00000551845 USP17L17D6RBQ6 530 aa12.56□□□□□ -0.4
PTCH1-225ENST00000551845 USP17L19D6RCP7 530 aa12.56□□□□□ -0.4
PTCH1-225ENST00000551845 USP17L20D6RJB6 530 aa12.56□□□□□ -0.4
PTCH1-225ENST00000551845 H0YGN5 161 aa12.56□□□□□ -0.4
PTCH1-225ENST00000551845 TTLL1O95922 423 aa12.56□□□□□ -0.4
PTCH1-225ENST00000551845 MYCP01106 439 aaPredicted RBP12.56□□□□□ -0.4
PTCH1-225ENST00000551845 IRX3P78415 501 aaPredicted RBP12.56□□□□□ -0.4
PTCH1-225ENST00000551845 PTH1RQ03431 593 aa12.56□□□□□ -0.4
PTCH1-225ENST00000551845 USP17L24Q0WX57 530 aa12.56□□□□□ -0.4
PTCH1-225ENST00000551845 SLC9C1Q4G0N8 1177 aa12.56□□□□□ -0.4
PTCH1-225ENST00000551845 C17orf99Q6UX52 265 aa12.56□□□□□ -0.4
PTCH1-225ENST00000551845 SLC17A8Q8NDX2 589 aa12.56□□□□□ -0.4
PTCH1-225ENST00000551845 STAG1Q8WVM7 1258 aa12.56□□□□□ -0.4
PTCH1-225ENST00000551845 LPAR1Q92633 364 aa12.56□□□□□ -0.4
PTCH1-225ENST00000551845 MAP4K1Q92918 833 aa12.56□□□□□ -0.4
PTCH1-225ENST00000551845 MKL1Q969V6 931 aa12.56□□□□□ -0.4
PTCH1-225ENST00000551845 MTMR4Q9NYA4 1195 aa12.56□□□□□ -0.4
PTCH1-225ENST00000551845 RAD21O60216 631 aa12.55□□□□□ -0.4
PTCH1-225ENST00000551845 GCLCP48506 637 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-225ENST00000551845 KIF22Q14807 665 aa12.55□□□□□ -0.4
PTCH1-225ENST00000551845 CHRDL2Q6WN34 429 aa12.55□□□□□ -0.4
PTCH1-225ENST00000551845 CATSPERGQ6ZRH7 1159 aa12.55□□□□□ -0.4
PTCH1-225ENST00000551845 ESR2Q92731 530 aa12.55□□□□□ -0.4
PTCH1-225ENST00000551845 ZNF333Q96JL9 665 aa12.55□□□□□ -0.4
PTCH1-225ENST00000551845 P2RX7Q99572 595 aaKnown RBP12.55□□□□□ -0.4
PTCH1-225ENST00000551845 KRT23Q9C075 422 aa12.55□□□□□ -0.4
PTCH1-225ENST00000551845 ASCC2Q9H1I8 757 aaPredicted RBP12.55□□□□□ -0.4
PTCH1-225ENST00000551845 VCPKMTQ9H867 229 aa12.55□□□□□ -0.4
PTCH1-225ENST00000551845 GOPCQ9HD26 462 aa12.55□□□□□ -0.4
PTCH1-225ENST00000551845 HOXC10Q9NYD6 342 aa12.55□□□□□ -0.4
PTCH1-225ENST00000551845 CPA4Q9UI42 421 aa12.55□□□□□ -0.4
PTCH1-225ENST00000551845 IGKV6D-41A0A0C4DH26 115 aa12.54□□□□□ -0.4
PTCH1-225ENST00000551845 F5H6K3 240 aa12.54□□□□□ -0.4
PTCH1-225ENST00000551845 KLRC3Q07444 240 aa12.54□□□□□ -0.4
PTCH1-225ENST00000551845 TRDNQ13061 729 aa12.54□□□□□ -0.4
PTCH1-225ENST00000551845 COG2Q14746 738 aa12.54□□□□□ -0.4
PTCH1-225ENST00000551845 CCDC178Q5BJE1 867 aa12.54□□□□□ -0.4
PTCH1-225ENST00000551845 CLEC10AQ8IUN9 316 aa12.54□□□□□ -0.4
PTCH1-225ENST00000551845 CEP95Q96GE4 821 aa12.54□□□□□ -0.4
PTCH1-225ENST00000551845 TTC14Q96N46 770 aa12.54□□□□□ -0.4
PTCH1-225ENST00000551845 CNNM2Q9H8M5 875 aa12.54□□□□□ -0.4
PTCH1-225ENST00000551845 ANO2Q9NQ90 1003 aa12.54□□□□□ -0.4
PTCH1-225ENST00000551845 TCP11L1Q9NUJ3 509 aa12.54□□□□□ -0.4
PTCH1-225ENST00000551845 SYNPO2Q9UMS6 1093 aa12.54□□□□□ -0.4
PTCH1-225ENST00000551845 STX8Q9UNK0 236 aa12.54□□□□□ -0.4
PTCH1-225ENST00000551845 TACC3Q9Y6A5 838 aa12.54□□□□□ -0.4
PTCH1-225ENST00000551845 KIAA0100Q14667 2235 aaKnown RBP12.53□□□□□ -0.4
PTCH1-225ENST00000551845 MYH1P12882 1939 aa12.53□□□□□ -0.4
PTCH1-225ENST00000551845 VCAM1P19320 739 aa12.53□□□□□ -0.4
PTCH1-225ENST00000551845 TBC1D10CQ8IV04 446 aa12.53□□□□□ -0.4
PTCH1-225ENST00000551845 SPICE1Q8N0Z3 855 aa12.53□□□□□ -0.4
PTCH1-225ENST00000551845 GTF3C2Q8WUA4 911 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-225ENST00000551845 LSG1Q9H089 658 aaKnown RBP12.53□□□□□ -0.4
PTCH1-225ENST00000551845 RPAP3Q9H6T3 665 aaPredicted RBP12.53□□□□□ -0.4
PTCH1-225ENST00000551845 IL17RBQ9NRM6 502 aa12.53□□□□□ -0.4
PTCH1-225ENST00000551845 PTCH2Q9Y6C5 1203 aa12.53□□□□□ -0.4
PTCH1-225ENST00000551845 WDR46O15213 610 aaKnown RBP12.52□□□□□ -0.41
PTCH1-225ENST00000551845 KDM4AO75164 1064 aa12.52□□□□□ -0.41
PTCH1-225ENST00000551845 CYP21A2P08686 494 aa12.52□□□□□ -0.41
PTCH1-225ENST00000551845 IQCA1Q86XH1 822 aa12.52□□□□□ -0.41
PTCH1-225ENST00000551845 ANKRD13CQ8N6S4 541 aa12.52□□□□□ -0.41
PTCH1-225ENST00000551845 DPF3Q92784 378 aa12.52□□□□□ -0.41
PTCH1-225ENST00000551845 NBPF3Q9H094 633 aa12.52□□□□□ -0.41
PTCH1-225ENST00000551845 ZSWIM5Q9P217 1185 aa12.52□□□□□ -0.41
PTCH1-225ENST00000551845 RBM8AQ9Y5S9 174 aaKnown RBP12.52□□□□□ -0.41
PTCH1-225ENST00000551845 LAMB1P07942 1786 aa12.51□□□□□ -0.41
PTCH1-225ENST00000551845 FOCADQ5VW36 1801 aa12.51□□□□□ -0.41
PTCH1-225ENST00000551845 B4E1Z4 1266 aa12.51□□□□□ -0.41
PTCH1-225ENST00000551845 NMT2O60551 498 aa12.51□□□□□ -0.41
PTCH1-225ENST00000551845 BCRP11274 1271 aa12.51□□□□□ -0.41
PTCH1-225ENST00000551845 HOXD10P28358 340 aa12.51□□□□□ -0.41
PTCH1-225ENST00000551845 HERVK_113P62684 666 aa12.51□□□□□ -0.41
PTCH1-225ENST00000551845 CAP1Q01518 475 aa12.51□□□□□ -0.41
PTCH1-225ENST00000551845 KIAA1755Q5JYT7 1200 aa12.51□□□□□ -0.41
PTCH1-225ENST00000551845 RNF20Q5VTR2 975 aa12.51□□□□□ -0.41
PTCH1-225ENST00000551845 SLFN13Q68D06 897 aa12.51□□□□□ -0.41
PTCH1-225ENST00000551845 DGKHQ86XP1 1220 aa12.51□□□□□ -0.41
PTCH1-225ENST00000551845 GPRC5AQ8NFJ5 357 aa12.51□□□□□ -0.41
PTCH1-225ENST00000551845 NCOA7Q8NI08 942 aa12.51□□□□□ -0.41
PTCH1-225ENST00000551845 TANGO6Q9C0B7 1094 aa12.51□□□□□ -0.41
PTCH1-225ENST00000551845 MYH7P12883 1935 aa12.5□□□□□ -0.41
PTCH1-225ENST00000551845 E7EWF7 191 aa12.5□□□□□ -0.41
PTCH1-225ENST00000551845 FLOT1O75955 427 aa12.5□□□□□ -0.41
PTCH1-225ENST00000551845 REC8O95072 547 aa12.5□□□□□ -0.41
PTCH1-225ENST00000551845 FMNL1O95466 1100 aaPredicted RBP12.5□□□□□ -0.41
PTCH1-225ENST00000551845 GNRH1P01148 92 aa12.5□□□□□ -0.41
PTCH1-225ENST00000551845 TOP1P11387 765 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms