RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 ASCC2Q9H1I8 757 aaPredicted RBP17.9■□□□□ 0.46
SMARCD1-211ENST00000551497 VCPKMTQ9H867 229 aa17.9■□□□□ 0.46
SMARCD1-211ENST00000551497 ZFYVE28Q9HCC9 887 aa17.9■□□□□ 0.46
SMARCD1-211ENST00000551497 TCP11L1Q9NUJ3 509 aa17.9■□□□□ 0.46
SMARCD1-211ENST00000551497 SLC45A1Q9Y2W3 748 aa17.9■□□□□ 0.46
SMARCD1-211ENST00000551497 F5H6K3 240 aa17.89■□□□□ 0.45
SMARCD1-211ENST00000551497 RAD21O60216 631 aa17.89■□□□□ 0.45
SMARCD1-211ENST00000551497 HOXA7P31268 230 aaPredicted RBP17.89■□□□□ 0.45
SMARCD1-211ENST00000551497 NOVP48745 357 aa17.89■□□□□ 0.45
SMARCD1-211ENST00000551497 KLRC3Q07444 240 aa17.89■□□□□ 0.45
SMARCD1-211ENST00000551497 COL9A3Q14050 684 aaPredicted RBP17.89■□□□□ 0.45
SMARCD1-211ENST00000551497 RCSD1Q6JBY9 416 aa17.89■□□□□ 0.45
SMARCD1-211ENST00000551497 RASEFQ8IZ41 740 aa17.89■□□□□ 0.45
SMARCD1-211ENST00000551497 P2RX7Q99572 595 aaKnown RBP17.89■□□□□ 0.45
SMARCD1-211ENST00000551497 RPAP3Q9H6T3 665 aaPredicted RBP17.89■□□□□ 0.45
SMARCD1-211ENST00000551497 SH2D4AQ9H788 454 aa17.89■□□□□ 0.45
SMARCD1-211ENST00000551497 CNNM2Q9H8M5 875 aa17.89■□□□□ 0.45
SMARCD1-211ENST00000551497 CPA4Q9UI42 421 aa17.89■□□□□ 0.45
SMARCD1-211ENST00000551497 STX8Q9UNK0 236 aa17.89■□□□□ 0.45
SMARCD1-211ENST00000551497 GPR25O00155 361 aa17.88■□□□□ 0.45
SMARCD1-211ENST00000551497 TLR2O60603 784 aa17.88■□□□□ 0.45
SMARCD1-211ENST00000551497 REC8O95072 547 aa17.88■□□□□ 0.45
SMARCD1-211ENST00000551497 OSBPP22059 807 aa17.88■□□□□ 0.45
SMARCD1-211ENST00000551497 CATSPERGQ6ZRH7 1159 aa17.88■□□□□ 0.45
SMARCD1-211ENST00000551497 CHST3Q7LGC8 479 aa17.88■□□□□ 0.45
SMARCD1-211ENST00000551497 NUP88Q99567 741 aaPredicted RBP17.88■□□□□ 0.45
SMARCD1-211ENST00000551497 GOPCQ9HD26 462 aa17.88■□□□□ 0.45
SMARCD1-211ENST00000551497 LOC285556D6RIA3 1793 aa17.88■□□□□ 0.45
SMARCD1-211ENST00000551497 USP17L15C9J2P7 530 aa17.87■□□□□ 0.45
SMARCD1-211ENST00000551497 USP17L13C9JLJ4 530 aa17.87■□□□□ 0.45
SMARCD1-211ENST00000551497 USP17L11C9JVI0 530 aa17.87■□□□□ 0.45
SMARCD1-211ENST00000551497 USP17L18D6R9N7 530 aa17.87■□□□□ 0.45
SMARCD1-211ENST00000551497 USP17L22D6RA61 530 aa17.87■□□□□ 0.45
SMARCD1-211ENST00000551497 USP17L17D6RBQ6 530 aa17.87■□□□□ 0.45
SMARCD1-211ENST00000551497 USP17L19D6RCP7 530 aa17.87■□□□□ 0.45
SMARCD1-211ENST00000551497 USP17L20D6RJB6 530 aa17.87■□□□□ 0.45
SMARCD1-211ENST00000551497 PEX10O60683 326 aa17.87■□□□□ 0.45
SMARCD1-211ENST00000551497 NDUFB10O96000 172 aa17.87■□□□□ 0.45
SMARCD1-211ENST00000551497 USP17L24Q0WX57 530 aa17.87■□□□□ 0.45
SMARCD1-211ENST00000551497 TRDNQ13061 729 aa17.87■□□□□ 0.45
SMARCD1-211ENST00000551497 PABPC4Q13310 644 aaKnown RBP eCLIP17.87■□□□□ 0.45
SMARCD1-211ENST00000551497 POTEEQ6S8J3 1075 aa17.87■□□□□ 0.45
SMARCD1-211ENST00000551497 NCOA7Q8NI08 942 aa17.87■□□□□ 0.45
SMARCD1-211ENST00000551497 PARK7Q99497 189 aaKnown RBP17.87■□□□□ 0.45
SMARCD1-211ENST00000551497 TMEM47Q9BQJ4 181 aa17.87■□□□□ 0.45
SMARCD1-211ENST00000551497 USP26Q9BXU7 913 aa17.87■□□□□ 0.45
SMARCD1-211ENST00000551497 MYH4Q9Y623 1939 aa17.87■□□□□ 0.45
SMARCD1-211ENST00000551497 CASP8AP2Q9UKL3 1982 aa17.87■□□□□ 0.45
SMARCD1-211ENST00000551497 SEC24BO95487 1268 aa17.86■□□□□ 0.45
SMARCD1-211ENST00000551497 IRX3P78415 501 aaPredicted RBP17.86■□□□□ 0.45
SMARCD1-211ENST00000551497 SLFN13Q68D06 897 aa17.86■□□□□ 0.45
SMARCD1-211ENST00000551497 C17orf99Q6UX52 265 aa17.86■□□□□ 0.45
SMARCD1-211ENST00000551497 ZNF296Q8WUU4 475 aaPredicted RBP17.86■□□□□ 0.45
SMARCD1-211ENST00000551497 LPAR1Q92633 364 aa17.86■□□□□ 0.45
SMARCD1-211ENST00000551497 TTC14Q96N46 770 aa17.86■□□□□ 0.45
SMARCD1-211ENST00000551497 ZSCAN10Q96SZ4 725 aaPredicted RBP17.86■□□□□ 0.45
SMARCD1-211ENST00000551497 MTMR7Q9Y216 660 aa17.86■□□□□ 0.45
SMARCD1-211ENST00000551497 ADGRA2Q96PE1 1338 aa17.86■□□□□ 0.45
SMARCD1-211ENST00000551497 ECM2O94769 699 aaPredicted RBP17.85■□□□□ 0.45
SMARCD1-211ENST00000551497 TOP1P11387 765 aaKnown RBP17.85■□□□□ 0.45
SMARCD1-211ENST00000551497 MCCP23508 829 aa17.85■□□□□ 0.45
SMARCD1-211ENST00000551497 HSPA4P34932 840 aa17.85■□□□□ 0.45
SMARCD1-211ENST00000551497 ADCK5Q3MIX3 580 aa17.85■□□□□ 0.45
SMARCD1-211ENST00000551497 FAM83BQ5T0W9 1011 aa17.85■□□□□ 0.45
SMARCD1-211ENST00000551497 RNF20Q5VTR2 975 aa17.85■□□□□ 0.45
SMARCD1-211ENST00000551497 RALYLQ86SE5 291 aaKnown RBP17.85■□□□□ 0.45
SMARCD1-211ENST00000551497 IQCA1Q86XH1 822 aa17.85■□□□□ 0.45
SMARCD1-211ENST00000551497 SMCR8Q8TEV9 937 aaPredicted RBP17.85■□□□□ 0.45
SMARCD1-211ENST00000551497 KCNB2Q92953 911 aa17.85■□□□□ 0.45
SMARCD1-211ENST00000551497 TANGO6Q9C0B7 1094 aa17.85■□□□□ 0.45
SMARCD1-211ENST00000551497 PNMA3Q9UL41 463 aa17.85■□□□□ 0.45
SMARCD1-211ENST00000551497 ANTXR2P58335 489 aa17.84■□□□□ 0.45
SMARCD1-211ENST00000551497 HERVK_113P62684 666 aa17.84■□□□□ 0.45
SMARCD1-211ENST00000551497 COG2Q14746 738 aa17.84■□□□□ 0.45
SMARCD1-211ENST00000551497 TSGA10IPQ3SY00 556 aa17.84■□□□□ 0.45
SMARCD1-211ENST00000551497 PPP4R3BQ5MIZ7 849 aa17.84■□□□□ 0.45
SMARCD1-211ENST00000551497 SAMD1Q6SPF0 538 aaPredicted RBP17.84■□□□□ 0.45
SMARCD1-211ENST00000551497 RASGRP2Q7LDG7 609 aa17.84■□□□□ 0.45
SMARCD1-211ENST00000551497 DGKHQ86XP1 1220 aa17.84■□□□□ 0.45
SMARCD1-211ENST00000551497 MB21D2Q8IYB1 491 aaPredicted RBP17.84■□□□□ 0.45
SMARCD1-211ENST00000551497 ANKRD13CQ8N6S4 541 aa17.84■□□□□ 0.45
SMARCD1-211ENST00000551497 ENAHQ8N8S7 591 aaPredicted RBP17.84■□□□□ 0.45
SMARCD1-211ENST00000551497 GMCL1P1Q8NEA9 526 aa17.84■□□□□ 0.45
SMARCD1-211ENST00000551497 ANKS1AQ92625 1134 aa17.84■□□□□ 0.45
SMARCD1-211ENST00000551497 UBAC1Q9BSL1 405 aa17.84■□□□□ 0.45
SMARCD1-211ENST00000551497 FBXO28Q9NVF7 368 aa17.84■□□□□ 0.45
SMARCD1-211ENST00000551497 SYNPO2Q9UMS6 1093 aa17.84■□□□□ 0.45
SMARCD1-211ENST00000551497 TNKSO95271 1327 aa17.83■□□□□ 0.44
SMARCD1-211ENST00000551497 WDR46O15213 610 aaKnown RBP17.83■□□□□ 0.44
SMARCD1-211ENST00000551497 FKTNO75072 461 aa17.83■□□□□ 0.44
SMARCD1-211ENST00000551497 BCRP11274 1271 aa17.83■□□□□ 0.44
SMARCD1-211ENST00000551497 NT5C2P49902 561 aa17.83■□□□□ 0.44
SMARCD1-211ENST00000551497 CAP1Q01518 475 aa17.83■□□□□ 0.44
SMARCD1-211ENST00000551497 SP3Q02447 781 aa17.83■□□□□ 0.44
SMARCD1-211ENST00000551497 SEC23AQ15436 765 aa17.83■□□□□ 0.44
SMARCD1-211ENST00000551497 NOM1Q5C9Z4 860 aaKnown RBP17.83■□□□□ 0.44
SMARCD1-211ENST00000551497 SENP2Q9HC62 589 aa17.83■□□□□ 0.44
SMARCD1-211ENST00000551497 GPHNQ9NQX3 736 aaPredicted RBP17.83■□□□□ 0.44
SMARCD1-211ENST00000551497 RBPJLQ9UBG7 517 aa17.83■□□□□ 0.44
SMARCD1-211ENST00000551497 SNX14Q9Y5W7 946 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms