RNA–Protein interactions for RNA: ENST00000550964.5

PFDN5-213, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-213ENST00000550964 ATP2B2Q01814 1243 aa11.84□□□□□ -0.51
PFDN5-213ENST00000550964 COG2Q14746 738 aa11.84□□□□□ -0.51
PFDN5-213ENST00000550964 SART3Q15020 963 aaKnown RBP11.84□□□□□ -0.51
PFDN5-213ENST00000550964 RCSD1Q6JBY9 416 aa11.84□□□□□ -0.51
PFDN5-213ENST00000550964 LBX2Q6XYB7 198 aa11.84□□□□□ -0.51
PFDN5-213ENST00000550964 CATSPERGQ6ZRH7 1159 aa11.84□□□□□ -0.51
PFDN5-213ENST00000550964 TNS4Q8IZW8 715 aa11.84□□□□□ -0.51
PFDN5-213ENST00000550964 ASCC2Q9H1I8 757 aaPredicted RBP11.84□□□□□ -0.51
PFDN5-213ENST00000550964 EFCC1Q9HA90 598 aa11.84□□□□□ -0.51
PFDN5-213ENST00000550964 EMILIN3Q9NT22 766 aa11.84□□□□□ -0.51
PFDN5-213ENST00000550964 MTMR4Q9NYA4 1195 aa11.84□□□□□ -0.51
PFDN5-213ENST00000550964 TSKSQ9UJT2 592 aa11.84□□□□□ -0.51
PFDN5-213ENST00000550964 PNMA2Q9UL42 364 aa11.84□□□□□ -0.51
PFDN5-213ENST00000550964 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.84□□□□□ -0.51
PFDN5-213ENST00000550964 RABGAP1Q9Y3P9 1069 aa11.84□□□□□ -0.51
PFDN5-213ENST00000550964 ERICH2A1L162 156 aa11.83□□□□□ -0.52
PFDN5-213ENST00000550964 REC8O95072 547 aa11.83□□□□□ -0.52
PFDN5-213ENST00000550964 SLURP2P0DP57 97 aa11.83□□□□□ -0.52
PFDN5-213ENST00000550964 VCAM1P19320 739 aa11.83□□□□□ -0.52
PFDN5-213ENST00000550964 COPB2P35606 906 aa11.83□□□□□ -0.52
PFDN5-213ENST00000550964 HERVK_113P62684 666 aa11.83□□□□□ -0.52
PFDN5-213ENST00000550964 LACTBP83111 547 aaPredicted RBP11.83□□□□□ -0.52
PFDN5-213ENST00000550964 CTDSPL2Q05D32 466 aa11.83□□□□□ -0.52
PFDN5-213ENST00000550964 NBPF11Q86T75 865 aa11.83□□□□□ -0.52
PFDN5-213ENST00000550964 GMCL1P1Q8NEA9 526 aa11.83□□□□□ -0.52
PFDN5-213ENST00000550964 GPRC5AQ8NFJ5 357 aa11.83□□□□□ -0.52
PFDN5-213ENST00000550964 MAP4K1Q92918 833 aa11.83□□□□□ -0.52
PFDN5-213ENST00000550964 COA7Q96BR5 231 aa11.83□□□□□ -0.52
PFDN5-213ENST00000550964 MTA3Q9BTC8 594 aa11.83□□□□□ -0.52
PFDN5-213ENST00000550964 TANGO6Q9C0B7 1094 aa11.83□□□□□ -0.52
PFDN5-213ENST00000550964 CLIP2Q9UDT6 1046 aa11.83□□□□□ -0.52
PFDN5-213ENST00000550964 IGKV6D-41A0A0C4DH26 115 aa11.82□□□□□ -0.52
PFDN5-213ENST00000550964 FOXP2O15409 715 aa11.82□□□□□ -0.52
PFDN5-213ENST00000550964 PRDM1O75626 825 aa11.82□□□□□ -0.52
PFDN5-213ENST00000550964 BCRP11274 1271 aa11.82□□□□□ -0.52
PFDN5-213ENST00000550964 ZKSCAN1P17029 563 aaPredicted RBP11.82□□□□□ -0.52
PFDN5-213ENST00000550964 CAPN2P17655 700 aa11.82□□□□□ -0.52
PFDN5-213ENST00000550964 MAPK4P31152 587 aa11.82□□□□□ -0.52
PFDN5-213ENST00000550964 JAG1P78504 1218 aa11.82□□□□□ -0.52
PFDN5-213ENST00000550964 DGKZQ13574 1117 aa11.82□□□□□ -0.52
PFDN5-213ENST00000550964 ZYXQ15942 572 aaKnown RBP11.82□□□□□ -0.52
PFDN5-213ENST00000550964 RRP12Q5JTH9 1297 aaKnown RBP11.82□□□□□ -0.52
PFDN5-213ENST00000550964 TREML2Q5T2D2 321 aa11.82□□□□□ -0.52
PFDN5-213ENST00000550964 FBXO46Q6PJ61 603 aaPredicted RBP11.82□□□□□ -0.52
PFDN5-213ENST00000550964 RALYLQ86SE5 291 aaKnown RBP11.82□□□□□ -0.52
PFDN5-213ENST00000550964 CCDC84Q86UT8 332 aaPredicted RBP11.82□□□□□ -0.52
PFDN5-213ENST00000550964 DGKHQ86XP1 1220 aa11.82□□□□□ -0.52
PFDN5-213ENST00000550964 ACER1Q8TDN7 264 aa11.82□□□□□ -0.52
PFDN5-213ENST00000550964 CHURC1Q8WUH1 139 aa11.82□□□□□ -0.52
PFDN5-213ENST00000550964 ESYT1Q9BSJ8 1104 aa11.82□□□□□ -0.52
PFDN5-213ENST00000550964 RPAP3Q9H6T3 665 aaPredicted RBP11.82□□□□□ -0.52
PFDN5-213ENST00000550964 CWC22Q9HCG8 908 aaKnown RBP11.82□□□□□ -0.52
PFDN5-213ENST00000550964 MORF4L1Q9UBU8 362 aa11.82□□□□□ -0.52
PFDN5-213ENST00000550964 STX8Q9UNK0 236 aa11.82□□□□□ -0.52
PFDN5-213ENST00000550964 CTDP1Q9Y5B0 961 aaPredicted RBP11.82□□□□□ -0.52
PFDN5-213ENST00000550964 F5H6K3 240 aa11.81□□□□□ -0.52
PFDN5-213ENST00000550964 RAD21O60216 631 aa11.81□□□□□ -0.52
PFDN5-213ENST00000550964 SLC34A2O95436 690 aa11.81□□□□□ -0.52
PFDN5-213ENST00000550964 FMNL1O95466 1100 aaPredicted RBP11.81□□□□□ -0.52
PFDN5-213ENST00000550964 CYP2C8P10632 490 aa11.81□□□□□ -0.52
PFDN5-213ENST00000550964 TOP1P11387 765 aaKnown RBP11.81□□□□□ -0.52
PFDN5-213ENST00000550964 KLRC3Q07444 240 aa11.81□□□□□ -0.52
PFDN5-213ENST00000550964 KRT32Q14532 448 aa11.81□□□□□ -0.52
PFDN5-213ENST00000550964 STK11IPQ8N1F8 1099 aa11.81□□□□□ -0.52
PFDN5-213ENST00000550964 PRPF38AQ8NAV1 312 aaKnown RBP11.81□□□□□ -0.52
PFDN5-213ENST00000550964 NCOA7Q8NI08 942 aa11.81□□□□□ -0.52
PFDN5-213ENST00000550964 CEP95Q96GE4 821 aa11.81□□□□□ -0.52
PFDN5-213ENST00000550964 GMCL1Q96IK5 515 aa11.81□□□□□ -0.52
PFDN5-213ENST00000550964 UBAC1Q9BSL1 405 aa11.81□□□□□ -0.52
PFDN5-213ENST00000550964 ANO2Q9NQ90 1003 aa11.81□□□□□ -0.52
PFDN5-213ENST00000550964 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.81□□□□□ -0.52
PFDN5-213ENST00000550964 CPA4Q9UI42 421 aa11.81□□□□□ -0.52
PFDN5-213ENST00000550964 FEM1BQ9UK73 627 aa11.81□□□□□ -0.52
PFDN5-213ENST00000550964 TRIM17Q9Y577 477 aa11.81□□□□□ -0.52
PFDN5-213ENST00000550964 ADGRA2Q96PE1 1338 aa11.81□□□□□ -0.52
PFDN5-213ENST00000550964 PARP14Q460N5 1801 aa11.81□□□□□ -0.52
PFDN5-213ENST00000550964 A0A1W2PRG0 241 aa11.8□□□□□ -0.52
PFDN5-213ENST00000550964 STRNO43815 780 aa11.8□□□□□ -0.52
PFDN5-213ENST00000550964 PLA2G6O60733 806 aa11.8□□□□□ -0.52
PFDN5-213ENST00000550964 FLOT1O75955 427 aa11.8□□□□□ -0.52
PFDN5-213ENST00000550964 SLC25A27O95847 323 aa11.8□□□□□ -0.52
PFDN5-213ENST00000550964 PSMC4P43686 418 aa11.8□□□□□ -0.52
PFDN5-213ENST00000550964 HAND2P61296 217 aa11.8□□□□□ -0.52
PFDN5-213ENST00000550964 FAM47AQ5JRC9 791 aa11.8□□□□□ -0.52
PFDN5-213ENST00000550964 FAM160B2Q86V87 743 aa11.8□□□□□ -0.52
PFDN5-213ENST00000550964 TRMT44Q8IYL2 757 aaKnown RBP11.8□□□□□ -0.52
PFDN5-213ENST00000550964 TMTC2Q8N394 836 aa11.8□□□□□ -0.52
PFDN5-213ENST00000550964 ANKRD13CQ8N6S4 541 aa11.8□□□□□ -0.52
PFDN5-213ENST00000550964 DCAF4Q8WV16 495 aa11.8□□□□□ -0.52
PFDN5-213ENST00000550964 P2RX7Q99572 595 aaKnown RBP11.8□□□□□ -0.52
PFDN5-213ENST00000550964 SLC5A4Q9NY91 659 aa11.8□□□□□ -0.52
PFDN5-213ENST00000550964 IVNS1ABPQ9Y6Y0 642 aa11.8□□□□□ -0.52
PFDN5-213ENST00000550964 TNPO2O14787 897 aaKnown RBP11.79□□□□□ -0.52
PFDN5-213ENST00000550964 ZBED4O75132 1171 aa11.79□□□□□ -0.52
PFDN5-213ENST00000550964 HMGB1P09429 215 aaKnown RBP11.79□□□□□ -0.52
PFDN5-213ENST00000550964 BMP3P12645 472 aa11.79□□□□□ -0.52
PFDN5-213ENST00000550964 MCCP23508 829 aa11.79□□□□□ -0.52
PFDN5-213ENST00000550964 DSG3P32926 999 aa11.79□□□□□ -0.52
PFDN5-213ENST00000550964 SLC1A4P43007 532 aa11.79□□□□□ -0.52
PFDN5-213ENST00000550964 NOVP48745 357 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms