RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 PARP2Q9UGN5 583 aa7.38□□□□□ -1.23
SCAF11-214ENST00000550893 ADAMTS4O75173 837 aa7.37□□□□□ -1.23
SCAF11-214ENST00000550893 NEFMP07197 916 aa7.37□□□□□ -1.23
SCAF11-214ENST00000550893 FOSL1P15407 271 aa7.37□□□□□ -1.23
SCAF11-214ENST00000550893 LRRC14Q15048 493 aa7.37□□□□□ -1.23
SCAF11-214ENST00000550893 ZNF765Q7L2R6 523 aa7.37□□□□□ -1.23
SCAF11-214ENST00000550893 FBXO33Q7Z6M2 555 aa7.37□□□□□ -1.23
SCAF11-214ENST00000550893 CYP8B1Q9UNU6 501 aa7.37□□□□□ -1.23
SCAF11-214ENST00000550893 CSADQ9Y600 493 aa7.37□□□□□ -1.23
SCAF11-214ENST00000550893 TMEM94Q12767 1356 aa7.36□□□□□ -1.23
SCAF11-214ENST00000550893 ERVK-24P63145 666 aa7.36□□□□□ -1.23
SCAF11-214ENST00000550893 CDK5R2Q13319 367 aa7.36□□□□□ -1.23
SCAF11-214ENST00000550893 CCDC27Q2M243 656 aa7.36□□□□□ -1.23
SCAF11-214ENST00000550893 DUSP27Q5VZP5 1158 aa7.36□□□□□ -1.23
SCAF11-214ENST00000550893 RNF214Q8ND24 703 aa7.36□□□□□ -1.23
SCAF11-214ENST00000550893 ISL2Q96A47 359 aa7.36□□□□□ -1.23
SCAF11-214ENST00000550893 SLC52A1Q9NWF4 448 aa7.36□□□□□ -1.23
SCAF11-214ENST00000550893 AHDC1Q5TGY3 1603 aaPredicted RBP7.36□□□□□ -1.23
SCAF11-214ENST00000550893 METP08581 1390 aa7.35□□□□□ -1.23
SCAF11-214ENST00000550893 DCDC2CA8MYV0 355 aa7.35□□□□□ -1.23
SCAF11-214ENST00000550893 CYP26A1O43174 497 aa7.35□□□□□ -1.23
SCAF11-214ENST00000550893 DAB2P98082 770 aa7.35□□□□□ -1.23
SCAF11-214ENST00000550893 TAGLNQ01995 201 aaKnown RBP7.35□□□□□ -1.23
SCAF11-214ENST00000550893 CYP27A1Q02318 531 aa7.35□□□□□ -1.23
SCAF11-214ENST00000550893 MSMPQ1L6U9 139 aa7.35□□□□□ -1.23
SCAF11-214ENST00000550893 PPM1JQ5JR12 505 aa7.35□□□□□ -1.23
SCAF11-214ENST00000550893 OGFOD3Q6PK18 319 aa7.35□□□□□ -1.23
SCAF11-214ENST00000550893 PCOLCE2Q9UKZ9 415 aa7.35□□□□□ -1.23
SCAF11-214ENST00000550893 PCDHA4Q9UN74 947 aa7.35□□□□□ -1.23
SCAF11-214ENST00000550893 PHLPP1O60346 1717 aa7.35□□□□□ -1.23
SCAF11-214ENST00000550893 SHPRHQ149N8 1683 aa7.35□□□□□ -1.23
SCAF11-214ENST00000550893 RAB3GAP2Q9H2M9 1393 aa7.34□□□□□ -1.23
SCAF11-214ENST00000550893 ADGRB1O14514 1584 aa7.34□□□□□ -1.23
SCAF11-214ENST00000550893 RGPD8O14715 1765 aaPredicted RBP7.34□□□□□ -1.23
SCAF11-214ENST00000550893 PTPN11Q06124 597 aaPredicted RBP7.34□□□□□ -1.23
SCAF11-214ENST00000550893 PSMD2Q13200 908 aa7.34□□□□□ -1.23
SCAF11-214ENST00000550893 CCDC85BQ15834 202 aaPredicted RBP7.34□□□□□ -1.23
SCAF11-214ENST00000550893 MEI1Q5TIA1 1274 aa7.34□□□□□ -1.23
SCAF11-214ENST00000550893 SCARA3Q6AZY7 606 aa7.34□□□□□ -1.23
SCAF11-214ENST00000550893 TTBK2Q6IQ55 1244 aa7.34□□□□□ -1.23
SCAF11-214ENST00000550893 C12orf40Q86WS4 652 aa7.34□□□□□ -1.23
SCAF11-214ENST00000550893 FAM161BQ96MY7 647 aa7.34□□□□□ -1.23
SCAF11-214ENST00000550893 SLC26A8Q96RN1 970 aa7.34□□□□□ -1.23
SCAF11-214ENST00000550893 LRRC4CQ9HCJ2 640 aa7.34□□□□□ -1.23
SCAF11-214ENST00000550893 SSU72Q9NP77 194 aaKnown RBP7.34□□□□□ -1.23
SCAF11-214ENST00000550893 PIK3C2GO75747 1445 aa7.34□□□□□ -1.23
SCAF11-214ENST00000550893 USP32Q8NFA0 1604 aa7.34□□□□□ -1.24
SCAF11-214ENST00000550893 ARHGEF28Q8N1W1 1705 aaKnown RBP7.33□□□□□ -1.24
SCAF11-214ENST00000550893 FMN2Q9NZ56 1722 aa7.33□□□□□ -1.24
SCAF11-214ENST00000550893 FAM87AP0C7U9 286 aa7.33□□□□□ -1.24
SCAF11-214ENST00000550893 XPCQ01831 940 aaPredicted RBP7.33□□□□□ -1.24
SCAF11-214ENST00000550893 RING1Q06587 406 aa7.33□□□□□ -1.24
SCAF11-214ENST00000550893 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.33□□□□□ -1.24
SCAF11-214ENST00000550893 GOLGA2P5Q9HBQ8 144 aa7.33□□□□□ -1.24
SCAF11-214ENST00000550893 PTCH1Q13635 1447 aa7.33□□□□□ -1.24
SCAF11-214ENST00000550893 SETD5Q9C0A6 1442 aa7.33□□□□□ -1.24
SCAF11-214ENST00000550893 MYOM2P54296 1465 aa7.32□□□□□ -1.24
SCAF11-214ENST00000550893 LRP6O75581 1613 aa7.32□□□□□ -1.24
SCAF11-214ENST00000550893 NTF4P34130 210 aa7.32□□□□□ -1.24
SCAF11-214ENST00000550893 HSPA1LP34931 641 aa7.32□□□□□ -1.24
SCAF11-214ENST00000550893 GP2P55259 537 aaKnown RBP7.32□□□□□ -1.24
SCAF11-214ENST00000550893 INPP5AQ14642 412 aa7.32□□□□□ -1.24
SCAF11-214ENST00000550893 TMC4Q7Z404 712 aa7.32□□□□□ -1.24
SCAF11-214ENST00000550893 GAL3ST3Q96A11 431 aa7.32□□□□□ -1.24
SCAF11-214ENST00000550893 ZC3H7BQ9UGR2 993 aaKnown RBP7.32□□□□□ -1.24
SCAF11-214ENST00000550893 TECPR2O15040 1411 aa7.32□□□□□ -1.24
SCAF11-214ENST00000550893 MST1RQ04912 1400 aa7.32□□□□□ -1.24
SCAF11-214ENST00000550893 CDC42BPGQ6DT37 1551 aa7.32□□□□□ -1.24
SCAF11-214ENST00000550893 ABCA3Q99758 1704 aa7.32□□□□□ -1.24
SCAF11-214ENST00000550893 PIK3R4Q99570 1358 aa7.32□□□□□ -1.24
SCAF11-214ENST00000550893 LEFTY1O75610 366 aa7.31□□□□□ -1.24
SCAF11-214ENST00000550893 WNT11O96014 354 aa7.31□□□□□ -1.24
SCAF11-214ENST00000550893 CTSHP09668 335 aa7.31□□□□□ -1.24
SCAF11-214ENST00000550893 KCNA6P17658 529 aa7.31□□□□□ -1.24
SCAF11-214ENST00000550893 ERCC3P19447 782 aa7.31□□□□□ -1.24
SCAF11-214ENST00000550893 MAP3K11Q16584 847 aa7.31□□□□□ -1.24
SCAF11-214ENST00000550893 CYP27C1Q4G0S4 372 aa7.31□□□□□ -1.24
SCAF11-214ENST00000550893 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.31□□□□□ -1.24
SCAF11-214ENST00000550893 UBE3DQ7Z6J8 389 aa7.31□□□□□ -1.24
SCAF11-214ENST00000550893 PICK1Q9NRD5 415 aa7.31□□□□□ -1.24
SCAF11-214ENST00000550893 CRYBG1Q9Y4K1 1723 aa7.31□□□□□ -1.24
SCAF11-214ENST00000550893 ROBO2Q9HCK4 1378 aa7.31□□□□□ -1.24
SCAF11-214ENST00000550893 ADGRB2O60241 1585 aa7.3□□□□□ -1.24
SCAF11-214ENST00000550893 FAM135BQ49AJ0 1406 aa7.3□□□□□ -1.24
SCAF11-214ENST00000550893 ADGRL3Q9HAR2 1447 aa7.3□□□□□ -1.24
SCAF11-214ENST00000550893 RPS26P62854 115 aaKnown RBP7.3□□□□□ -1.24
SCAF11-214ENST00000550893 ZBTB37Q5TC79 503 aa7.3□□□□□ -1.24
SCAF11-214ENST00000550893 LRFN4Q6PJG9 635 aa7.3□□□□□ -1.24
SCAF11-214ENST00000550893 ELMO3Q96BJ8 720 aa7.3□□□□□ -1.24
SCAF11-214ENST00000550893 DUSP23Q9BVJ7 150 aa7.3□□□□□ -1.24
SCAF11-214ENST00000550893 CCDC39Q9UFE4 941 aa7.3□□□□□ -1.24
SCAF11-214ENST00000550893 PCDHB5Q9Y5E4 795 aa7.3□□□□□ -1.24
SCAF11-214ENST00000550893 OAS3Q9Y6K5 1087 aaKnown RBP7.3□□□□□ -1.24
SCAF11-214ENST00000550893 ANKRD30BQ9BXX2 1392 aa7.3□□□□□ -1.24
SCAF11-214ENST00000550893 DCCP43146 1447 aa7.29□□□□□ -1.24
SCAF11-214ENST00000550893 NCOA3Q9Y6Q9 1424 aa7.29□□□□□ -1.24
SCAF11-214ENST00000550893 FANCGO15287 622 aa7.29□□□□□ -1.24
SCAF11-214ENST00000550893 PRNPP04156 253 aa7.29□□□□□ -1.24
SCAF11-214ENST00000550893 CDK8P49336 464 aa7.29□□□□□ -1.24
SCAF11-214ENST00000550893 LIG3P49916 1009 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms