RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 LRRC10BA6NIK2 292 aa16.99■□□□□ 0.31
PDE1B-207ENST00000550620 SLC5A1P13866 664 aa16.99■□□□□ 0.31
PDE1B-207ENST00000550620 ERVK-24P63145 666 aa16.99■□□□□ 0.31
PDE1B-207ENST00000550620 TOM1L2Q6ZVM7 507 aa16.99■□□□□ 0.31
PDE1B-207ENST00000550620 CCDC148Q8NFR7 591 aa16.99■□□□□ 0.31
PDE1B-207ENST00000550620 MKRN1Q9UHC7 482 aaKnown RBP16.99■□□□□ 0.31
PDE1B-207ENST00000550620 RWDD2AQ9UIY3 292 aa16.99■□□□□ 0.31
PDE1B-207ENST00000550620 RRP15Q9Y3B9 282 aaKnown RBP16.99■□□□□ 0.31
PDE1B-207ENST00000550620 IRS4O14654 1257 aaPredicted RBP16.99■□□□□ 0.31
PDE1B-207ENST00000550620 CCT6AP40227 531 aaKnown RBP16.99■□□□□ 0.31
PDE1B-207ENST00000550620 TNNT3P45378 269 aaPredicted RBP16.99■□□□□ 0.31
PDE1B-207ENST00000550620 KRT31Q15323 416 aa16.99■□□□□ 0.31
PDE1B-207ENST00000550620 CMTR1Q8N1G2 835 aaKnown RBP16.99■□□□□ 0.31
PDE1B-207ENST00000550620 DDX17Q92841 729 aaKnown RBP16.99■□□□□ 0.31
PDE1B-207ENST00000550620 VIPAS39Q9H9C1 493 aa16.99■□□□□ 0.31
PDE1B-207ENST00000550620 SLC4A4Q9Y6R1 1079 aa16.99■□□□□ 0.31
PDE1B-207ENST00000550620 STARD3NLO95772 234 aa16.98■□□□□ 0.31
PDE1B-207ENST00000550620 ARHGAP25P42331 645 aa16.98■□□□□ 0.31
PDE1B-207ENST00000550620 GOLGA6L1Q8N7Z2 621 aa16.98■□□□□ 0.31
PDE1B-207ENST00000550620 CTCFLQ8NI51 663 aaPredicted RBP16.98■□□□□ 0.31
PDE1B-207ENST00000550620 PHF20Q9BVI0 1012 aa16.98■□□□□ 0.31
PDE1B-207ENST00000550620 BCL9LQ86UU0 1499 aa16.98■□□□□ 0.31
PDE1B-207ENST00000550620 VGLL3A8MV65 326 aa16.98■□□□□ 0.31
PDE1B-207ENST00000550620 PDE8AO60658 829 aa16.98■□□□□ 0.31
PDE1B-207ENST00000550620 FGFR2P21802 821 aa16.98■□□□□ 0.31
PDE1B-207ENST00000550620 COPB1P53618 953 aaKnown RBP16.98■□□□□ 0.31
PDE1B-207ENST00000550620 MAP9Q49MG5 647 aa16.98■□□□□ 0.31
PDE1B-207ENST00000550620 C10orf67Q8IYJ2 551 aa16.98■□□□□ 0.31
PDE1B-207ENST00000550620 SMYD4Q8IYR2 804 aaPredicted RBP16.98■□□□□ 0.31
PDE1B-207ENST00000550620 SYNE4Q8N205 404 aa16.98■□□□□ 0.31
PDE1B-207ENST00000550620 GPTP24298 496 aa16.97■□□□□ 0.31
PDE1B-207ENST00000550620 AMPD2Q01433 879 aa16.97■□□□□ 0.31
PDE1B-207ENST00000550620 PAK1Q13153 545 aa16.97■□□□□ 0.31
PDE1B-207ENST00000550620 RRAGBQ5VZM2 374 aa16.97■□□□□ 0.31
PDE1B-207ENST00000550620 SUGCTQ9HAC7 445 aa16.97■□□□□ 0.31
PDE1B-207ENST00000550620 RMND1Q9NWS8 449 aa16.97■□□□□ 0.31
PDE1B-207ENST00000550620 TMOD3Q9NYL9 352 aa16.97■□□□□ 0.31
PDE1B-207ENST00000550620 VPS54Q9P1Q0 977 aa16.97■□□□□ 0.31
PDE1B-207ENST00000550620 N4BP1O75113 896 aaKnown RBP16.96■□□□□ 0.31
PDE1B-207ENST00000550620 IL2RBP14784 551 aa16.96■□□□□ 0.31
PDE1B-207ENST00000550620 CASP1P29466 404 aa16.96■□□□□ 0.31
PDE1B-207ENST00000550620 KRT9P35527 623 aa16.96■□□□□ 0.31
PDE1B-207ENST00000550620 ESR2Q92731 530 aa16.96■□□□□ 0.31
PDE1B-207ENST00000550620 IQSEC3Q9UPP2 1182 aaPredicted RBP16.96■□□□□ 0.31
PDE1B-207ENST00000550620 SPATA31A3Q5VYP0 1347 aa16.96■□□□□ 0.31
PDE1B-207ENST00000550620 PRPF3O43395 683 aaKnown RBP16.96■□□□□ 0.31
PDE1B-207ENST00000550620 PRKAB2O43741 272 aa16.96■□□□□ 0.31
PDE1B-207ENST00000550620 RASGRF1Q13972 1273 aa16.96■□□□□ 0.31
PDE1B-207ENST00000550620 LCORLQ8N3X6 602 aa16.96■□□□□ 0.31
PDE1B-207ENST00000550620 SLF1Q9BQI6 1058 aa16.96■□□□□ 0.31
PDE1B-207ENST00000550620 VPS16Q9H269 839 aa16.96■□□□□ 0.31
PDE1B-207ENST00000550620 HAUS4Q9H6D7 363 aa16.96■□□□□ 0.31
PDE1B-207ENST00000550620 RBM28Q9NW13 759 aaKnown RBP16.96■□□□□ 0.31
PDE1B-207ENST00000550620 TRMT112Q9UI30 125 aaKnown RBP16.96■□□□□ 0.31
PDE1B-207ENST00000550620 LCMT1Q9UIC8 334 aa16.96■□□□□ 0.31
PDE1B-207ENST00000550620 MYO5AQ9Y4I1 1855 aaKnown RBP16.96■□□□□ 0.31
PDE1B-207ENST00000550620 KCNJ18B7U540 433 aa16.95■□□□□ 0.3
PDE1B-207ENST00000550620 PPARAQ07869 468 aa16.95■□□□□ 0.3
PDE1B-207ENST00000550620 KCNJ12Q14500 433 aa16.95■□□□□ 0.3
PDE1B-207ENST00000550620 TCP11X2Q5H9J9 407 aa16.95■□□□□ 0.3
PDE1B-207ENST00000550620 TTC38Q5R3I4 469 aa16.95■□□□□ 0.3
PDE1B-207ENST00000550620 WWC2Q6AWC2 1192 aa16.95■□□□□ 0.3
PDE1B-207ENST00000550620 DNAJC10Q8IXB1 793 aa16.95■□□□□ 0.3
PDE1B-207ENST00000550620 RPGRIP1Q96KN7 1286 aa16.95■□□□□ 0.3
PDE1B-207ENST00000550620 EFCC1Q9HA90 598 aa16.95■□□□□ 0.3
PDE1B-207ENST00000550620 DCCP43146 1447 aa16.95■□□□□ 0.3
PDE1B-207ENST00000550620 TNKSO95271 1327 aa16.95■□□□□ 0.3
PDE1B-207ENST00000550620 FAM205CA6NFA0 338 aa16.95■□□□□ 0.3
PDE1B-207ENST00000550620 PSMD14O00487 310 aa16.95■□□□□ 0.3
PDE1B-207ENST00000550620 GTPBP6O43824 516 aaPredicted RBP16.95■□□□□ 0.3
PDE1B-207ENST00000550620 NDUFA10O95299 355 aa16.95■□□□□ 0.3
PDE1B-207ENST00000550620 ATP2C1P98194 919 aaPredicted RBP16.95■□□□□ 0.3
PDE1B-207ENST00000550620 HLFQ16534 295 aa16.95■□□□□ 0.3
PDE1B-207ENST00000550620 TRAPPC11Q7Z392 1133 aa16.95■□□□□ 0.3
PDE1B-207ENST00000550620 NOA1Q8NC60 698 aaKnown RBP16.95■□□□□ 0.3
PDE1B-207ENST00000550620 TAB2Q9NYJ8 693 aa16.95■□□□□ 0.3
PDE1B-207ENST00000550620 EPN1Q9Y6I3 576 aaPredicted RBP16.95■□□□□ 0.3
PDE1B-207ENST00000550620 TRIM66O15016 1216 aa16.94■□□□□ 0.3
PDE1B-207ENST00000550620 CKAP4Q07065 602 aaKnown RBP16.94■□□□□ 0.3
PDE1B-207ENST00000550620 SEC23AQ15436 765 aa16.94■□□□□ 0.3
PDE1B-207ENST00000550620 PKN1Q16512 942 aa16.94■□□□□ 0.3
PDE1B-207ENST00000550620 TSR1Q2NL82 804 aaKnown RBP16.94■□□□□ 0.3
PDE1B-207ENST00000550620 ZNF658Q5TYW1 1059 aaPredicted RBP16.94■□□□□ 0.3
PDE1B-207ENST00000550620 CTR9Q6PD62 1173 aa16.94■□□□□ 0.3
PDE1B-207ENST00000550620 CATIPQ7Z7H3 387 aa16.94■□□□□ 0.3
PDE1B-207ENST00000550620 EHBP1Q8NDI1 1231 aa16.94■□□□□ 0.3
PDE1B-207ENST00000550620 XDHP47989 1333 aa16.94■□□□□ 0.3
PDE1B-207ENST00000550620 LRRIQ3A6PVS8 624 aaPredicted RBP16.94■□□□□ 0.3
PDE1B-207ENST00000550620 CALM1P0DP23 149 aa16.94■□□□□ 0.3
PDE1B-207ENST00000550620 CALM2P0DP24 149 aa16.94■□□□□ 0.3
PDE1B-207ENST00000550620 CALM3P0DP25 149 aa16.94■□□□□ 0.3
PDE1B-207ENST00000550620 AARSP49588 968 aaKnown RBP eCLIP16.94■□□□□ 0.3
PDE1B-207ENST00000550620 USP14P54578 494 aa16.94■□□□□ 0.3
PDE1B-207ENST00000550620 ZNF174Q15697 407 aa16.94■□□□□ 0.3
PDE1B-207ENST00000550620 EARS2Q5JPH6 523 aaKnown RBP16.94■□□□□ 0.3
PDE1B-207ENST00000550620 NCAPH2Q6IBW4 605 aa16.94■□□□□ 0.3
PDE1B-207ENST00000550620 NELFBQ8WX92 580 aa16.94■□□□□ 0.3
PDE1B-207ENST00000550620 RSPH14Q9UHP6 348 aa16.94■□□□□ 0.3
PDE1B-207ENST00000550620 GUCA1BQ9UMX6 200 aa16.94■□□□□ 0.3
PDE1B-207ENST00000550620 LRP5O75197 1615 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms