RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 ZNF654Q8IZM8 581 aa12.04□□□□□ -0.48
RAB5C-207ENST00000550504 C2orf69Q8N8R5 385 aa12.04□□□□□ -0.48
RAB5C-207ENST00000550504 NECAB1Q8N987 351 aa12.04□□□□□ -0.48
RAB5C-207ENST00000550504 PNMA1Q8ND90 353 aa12.04□□□□□ -0.48
RAB5C-207ENST00000550504 ACER1Q8TDN7 264 aa12.04□□□□□ -0.48
RAB5C-207ENST00000550504 TMX3Q96JJ7 454 aa12.04□□□□□ -0.48
RAB5C-207ENST00000550504 ZSCAN31Q96LW9 406 aaPredicted RBP12.04□□□□□ -0.48
RAB5C-207ENST00000550504 FEZ1Q99689 392 aa12.04□□□□□ -0.48
RAB5C-207ENST00000550504 GINM1Q9NU53 330 aa12.04□□□□□ -0.48
RAB5C-207ENST00000550504 ZHX2Q9Y6X8 837 aa12.04□□□□□ -0.48
RAB5C-207ENST00000550504 PAPPA2Q9BXP8 1791 aa12.04□□□□□ -0.48
RAB5C-207ENST00000550504 MYH4Q9Y623 1939 aa12.03□□□□□ -0.48
RAB5C-207ENST00000550504 A0A1W2PRG0 241 aa12.03□□□□□ -0.48
RAB5C-207ENST00000550504 GOLGA8AA7E2F4 631 aa12.03□□□□□ -0.48
RAB5C-207ENST00000550504 NOVP48745 357 aa12.03□□□□□ -0.48
RAB5C-207ENST00000550504 SLC4A3P48751 1232 aa12.03□□□□□ -0.48
RAB5C-207ENST00000550504 FKBP1BP68106 108 aa12.03□□□□□ -0.48
RAB5C-207ENST00000550504 CNKSR2Q8WXI2 1034 aa12.03□□□□□ -0.48
RAB5C-207ENST00000550504 ZNF274Q96GC6 653 aaPredicted RBP12.03□□□□□ -0.48
RAB5C-207ENST00000550504 SLKQ9H2G2 1235 aaPredicted RBP12.03□□□□□ -0.48
RAB5C-207ENST00000550504 NCOA5Q9HCD5 579 aaKnown RBP12.03□□□□□ -0.48
RAB5C-207ENST00000550504 TRPM7Q96QT4 1865 aa12.02□□□□□ -0.48
RAB5C-207ENST00000550504 TRIM75PA6NK02 468 aa12.02□□□□□ -0.49
RAB5C-207ENST00000550504 DTNBO60941 627 aa12.02□□□□□ -0.49
RAB5C-207ENST00000550504 DDAH1O94760 285 aa12.02□□□□□ -0.49
RAB5C-207ENST00000550504 METAP2P50579 478 aaKnown RBP eCLIP12.02□□□□□ -0.49
RAB5C-207ENST00000550504 EVCP57679 992 aa12.02□□□□□ -0.49
RAB5C-207ENST00000550504 SCRN1Q12765 414 aa12.02□□□□□ -0.49
RAB5C-207ENST00000550504 LDLRAD1Q5T700 205 aa12.02□□□□□ -0.49
RAB5C-207ENST00000550504 RASGRP2Q7LDG7 609 aa12.02□□□□□ -0.49
RAB5C-207ENST00000550504 CCDC83Q8IWF9 413 aa12.02□□□□□ -0.49
RAB5C-207ENST00000550504 SPRYD3Q8NCJ5 442 aa12.02□□□□□ -0.49
RAB5C-207ENST00000550504 MKL1Q969V6 931 aa12.02□□□□□ -0.49
RAB5C-207ENST00000550504 AS3MTQ9HBK9 375 aa12.02□□□□□ -0.49
RAB5C-207ENST00000550504 SH2B1Q9NRF2 756 aaPredicted RBP12.02□□□□□ -0.49
RAB5C-207ENST00000550504 FOXD4L1Q9NU39 408 aa12.02□□□□□ -0.49
RAB5C-207ENST00000550504 ISY1Q9ULR0 285 aaKnown RBP12.02□□□□□ -0.49
RAB5C-207ENST00000550504 HPS5Q9UPZ3 1129 aa12.02□□□□□ -0.49
RAB5C-207ENST00000550504 TMX2Q9Y320 296 aa12.02□□□□□ -0.49
RAB5C-207ENST00000550504 PASKQ96RG2 1323 aa12.02□□□□□ -0.49
RAB5C-207ENST00000550504 F5H6K3 240 aa12.01□□□□□ -0.49
RAB5C-207ENST00000550504 PFKFB2O60825 505 aa12.01□□□□□ -0.49
RAB5C-207ENST00000550504 CALM1P0DP23 149 aa12.01□□□□□ -0.49
RAB5C-207ENST00000550504 CALM2P0DP24 149 aa12.01□□□□□ -0.49
RAB5C-207ENST00000550504 CALM3P0DP25 149 aa12.01□□□□□ -0.49
RAB5C-207ENST00000550504 HTRA3P83110 453 aa12.01□□□□□ -0.49
RAB5C-207ENST00000550504 KLRC3Q07444 240 aa12.01□□□□□ -0.49
RAB5C-207ENST00000550504 ST3GAL1Q11201 340 aa12.01□□□□□ -0.49
RAB5C-207ENST00000550504 TROAPQ12815 778 aa12.01□□□□□ -0.49
RAB5C-207ENST00000550504 FSTL1Q12841 308 aa12.01□□□□□ -0.49
RAB5C-207ENST00000550504 SPP2Q13103 211 aa12.01□□□□□ -0.49
RAB5C-207ENST00000550504 MTMR2Q13614 643 aa12.01□□□□□ -0.49
RAB5C-207ENST00000550504 RTN1Q16799 776 aa12.01□□□□□ -0.49
RAB5C-207ENST00000550504 CCDC96Q2M329 555 aa12.01□□□□□ -0.49
RAB5C-207ENST00000550504 COL13A1Q5TAT6 717 aaPredicted RBP12.01□□□□□ -0.49
RAB5C-207ENST00000550504 SLFN13Q68D06 897 aa12.01□□□□□ -0.49
RAB5C-207ENST00000550504 SPICE1Q8N0Z3 855 aa12.01□□□□□ -0.49
RAB5C-207ENST00000550504 ZNF280CQ8ND82 737 aa12.01□□□□□ -0.49
RAB5C-207ENST00000550504 CTCFLQ8NI51 663 aaPredicted RBP12.01□□□□□ -0.49
RAB5C-207ENST00000550504 SLC10A4Q96EP9 437 aa12.01□□□□□ -0.49
RAB5C-207ENST00000550504 OTUD5Q96G74 571 aa12.01□□□□□ -0.49
RAB5C-207ENST00000550504 SH2D4AQ9H788 454 aa12.01□□□□□ -0.49
RAB5C-207ENST00000550504 FRMPD2Q68DX3 1309 aaPredicted RBP12.01□□□□□ -0.49
RAB5C-207ENST00000550504 SPDYE5A6NIY4 337 aa12□□□□□ -0.49
RAB5C-207ENST00000550504 USP17L10C9JJH3 530 aa12□□□□□ -0.49
RAB5C-207ENST00000550504 PPFIA3O75145 1194 aa12□□□□□ -0.49
RAB5C-207ENST00000550504 NDUFB10O96000 172 aa12□□□□□ -0.49
RAB5C-207ENST00000550504 HSP90AA1P07900 732 aaKnown RBP12□□□□□ -0.49
RAB5C-207ENST00000550504 GOLGA8HP0CJ92 632 aa12□□□□□ -0.49
RAB5C-207ENST00000550504 PDHBP11177 359 aa12□□□□□ -0.49
RAB5C-207ENST00000550504 CDC27P30260 824 aa12□□□□□ -0.49
RAB5C-207ENST00000550504 ADD1P35611 737 aaKnown RBP12□□□□□ -0.49
RAB5C-207ENST00000550504 HUNKP57058 714 aa12□□□□□ -0.49
RAB5C-207ENST00000550504 DGKZQ13574 1117 aa12□□□□□ -0.49
RAB5C-207ENST00000550504 GRM4Q14833 912 aa12□□□□□ -0.49
RAB5C-207ENST00000550504 KIAA1755Q5JYT7 1200 aa12□□□□□ -0.49
RAB5C-207ENST00000550504 USP17L2Q6R6M4 530 aa12□□□□□ -0.49
RAB5C-207ENST00000550504 ERO1BQ86YB8 467 aa12□□□□□ -0.49
RAB5C-207ENST00000550504 FANCBQ8NB91 859 aa12□□□□□ -0.49
RAB5C-207ENST00000550504 GMCL1P1Q8NEA9 526 aa12□□□□□ -0.49
RAB5C-207ENST00000550504 GTF3C6Q969F1 213 aa12□□□□□ -0.49
RAB5C-207ENST00000550504 OPTNQ96CV9 577 aa12□□□□□ -0.49
RAB5C-207ENST00000550504 NUP88Q99567 741 aaPredicted RBP12□□□□□ -0.49
RAB5C-207ENST00000550504 WDR18Q9BV38 432 aa12□□□□□ -0.49
RAB5C-207ENST00000550504 VCPKMTQ9H867 229 aa12□□□□□ -0.49
RAB5C-207ENST00000550504 GOPCQ9HD26 462 aa12□□□□□ -0.49
RAB5C-207ENST00000550504 GPCPD1Q9NPB8 672 aa12□□□□□ -0.49
RAB5C-207ENST00000550504 DAXXQ9UER7 740 aaPredicted RBP12□□□□□ -0.49
RAB5C-207ENST00000550504 AFG3L2Q9Y4W6 797 aa12□□□□□ -0.49
RAB5C-207ENST00000550504 PHIPQ8WWQ0 1821 aa12□□□□□ -0.49
RAB5C-207ENST00000550504 PARP1P09874 1014 aaKnown RBP11.99□□□□□ -0.49
RAB5C-207ENST00000550504 KIF5BP33176 963 aa11.99□□□□□ -0.49
RAB5C-207ENST00000550504 SLC1A4P43007 532 aa11.99□□□□□ -0.49
RAB5C-207ENST00000550504 PPATQ06203 517 aa11.99□□□□□ -0.49
RAB5C-207ENST00000550504 CMTR1Q8N1G2 835 aaKnown RBP11.99□□□□□ -0.49
RAB5C-207ENST00000550504 STAG2Q8N3U4 1231 aa11.99□□□□□ -0.49
RAB5C-207ENST00000550504 CCDC82Q8N4S0 544 aa11.99□□□□□ -0.49
RAB5C-207ENST00000550504 KIAA1683Q9H0B3 1180 aa11.99□□□□□ -0.49
RAB5C-207ENST00000550504 FAM217BQ9NTX9 383 aaPredicted RBP11.99□□□□□ -0.49
RAB5C-207ENST00000550504 MAD2L2Q9UI95 211 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms