RNA–Protein interactions for RNA: ENST00000550228.5

GPN3-207, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 353 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-207ENST00000550228 ACER1Q8TDN7 264 aa9.51□□□□□ -0.89
GPN3-207ENST00000550228 GTF3C6Q969F1 213 aa9.51□□□□□ -0.89
GPN3-207ENST00000550228 FEZ1Q99689 392 aa9.51□□□□□ -0.89
GPN3-207ENST00000550228 NYAP2Q9P242 653 aa9.51□□□□□ -0.89
GPN3-207ENST00000550228 HPS5Q9UPZ3 1129 aa9.51□□□□□ -0.89
GPN3-207ENST00000550228 CSADQ9Y600 493 aa9.51□□□□□ -0.89
GPN3-207ENST00000550228 PHIPQ8WWQ0 1821 aa9.51□□□□□ -0.89
GPN3-207ENST00000550228 A0A1W2PRG0 241 aa9.5□□□□□ -0.89
GPN3-207ENST00000550228 USP17L5A8MUK1 530 aa9.5□□□□□ -0.89
GPN3-207ENST00000550228 UBE2Q2LH0YL09 131 aa9.5□□□□□ -0.89
GPN3-207ENST00000550228 CPLX1O14810 134 aa9.5□□□□□ -0.89
GPN3-207ENST00000550228 PPFIA3O75145 1194 aa9.5□□□□□ -0.89
GPN3-207ENST00000550228 CALM1P0DP23 149 aa9.5□□□□□ -0.89
GPN3-207ENST00000550228 CALM2P0DP24 149 aa9.5□□□□□ -0.89
GPN3-207ENST00000550228 CALM3P0DP25 149 aa9.5□□□□□ -0.89
GPN3-207ENST00000550228 CUL4AQ13619 759 aa9.5□□□□□ -0.89
GPN3-207ENST00000550228 VGLL4Q14135 290 aa9.5□□□□□ -0.89
GPN3-207ENST00000550228 CCDC96Q2M329 555 aa9.5□□□□□ -0.89
GPN3-207ENST00000550228 NOL9Q5SY16 702 aaKnown RBP9.5□□□□□ -0.89
GPN3-207ENST00000550228 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.5□□□□□ -0.89
GPN3-207ENST00000550228 SIAH1Q8IUQ4 282 aa9.5□□□□□ -0.89
GPN3-207ENST00000550228 CTCFLQ8NI51 663 aaPredicted RBP9.5□□□□□ -0.89
GPN3-207ENST00000550228 CLMNQ96JQ2 1002 aa9.5□□□□□ -0.89
GPN3-207ENST00000550228 ELP3Q9H9T3 547 aa9.5□□□□□ -0.89
GPN3-207ENST00000550228 GBA2Q9HCG7 927 aaPredicted RBP9.5□□□□□ -0.89
GPN3-207ENST00000550228 GINM1Q9NU53 330 aa9.5□□□□□ -0.89
GPN3-207ENST00000550228 SNCAIPQ9Y6H5 919 aa9.5□□□□□ -0.89
GPN3-207ENST00000550228 MYH6P13533 1939 aa9.5□□□□□ -0.89
GPN3-207ENST00000550228 FRMPD2Q68DX3 1309 aaPredicted RBP9.5□□□□□ -0.89
GPN3-207ENST00000550228 UTRNP46939 3433 aa9.5□□□□□ -0.89
GPN3-207ENST00000550228 JAK2O60674 1132 aa9.49□□□□□ -0.89
GPN3-207ENST00000550228 PLEKHA8P1O95397 391 aa9.49□□□□□ -0.89
GPN3-207ENST00000550228 ITGBL1O95965 494 aaPredicted RBP9.49□□□□□ -0.89
GPN3-207ENST00000550228 GOLGA8HP0CJ92 632 aa9.49□□□□□ -0.89
GPN3-207ENST00000550228 PTPRAP18433 802 aa9.49□□□□□ -0.89
GPN3-207ENST00000550228 CDC27P30260 824 aa9.49□□□□□ -0.89
GPN3-207ENST00000550228 ADD1P35611 737 aaKnown RBP9.49□□□□□ -0.89
GPN3-207ENST00000550228 NOVP48745 357 aa9.49□□□□□ -0.89
GPN3-207ENST00000550228 TROAPQ12815 778 aa9.49□□□□□ -0.89
GPN3-207ENST00000550228 GRM4Q14833 912 aa9.49□□□□□ -0.89
GPN3-207ENST00000550228 SLFN13Q68D06 897 aa9.49□□□□□ -0.89
GPN3-207ENST00000550228 ANKRD13AQ8IZ07 590 aa9.49□□□□□ -0.89
GPN3-207ENST00000550228 CMTR1Q8N1G2 835 aaKnown RBP9.49□□□□□ -0.89
GPN3-207ENST00000550228 C2orf69Q8N8R5 385 aa9.49□□□□□ -0.89
GPN3-207ENST00000550228 FANCBQ8NB91 859 aa9.49□□□□□ -0.89
GPN3-207ENST00000550228 CNKSR2Q8WXI2 1034 aa9.49□□□□□ -0.89
GPN3-207ENST00000550228 SH2D4AQ9H788 454 aa9.49□□□□□ -0.89
GPN3-207ENST00000550228 AS3MTQ9HBK9 375 aa9.49□□□□□ -0.89
GPN3-207ENST00000550228 GPCPD1Q9NPB8 672 aa9.49□□□□□ -0.89
GPN3-207ENST00000550228 SMC3Q9UQE7 1217 aa9.49□□□□□ -0.89
GPN3-207ENST00000550228 ZHX2Q9Y6X8 837 aa9.49□□□□□ -0.89
GPN3-207ENST00000550228 NID2Q14112 1375 aa9.49□□□□□ -0.89
GPN3-207ENST00000550228 PTPDC1A2A3K4 754 aa9.48□□□□□ -0.89
GPN3-207ENST00000550228 TRIM75PA6NK02 468 aa9.48□□□□□ -0.89
GPN3-207ENST00000550228 F5H6K3 240 aa9.48□□□□□ -0.89
GPN3-207ENST00000550228 CTDNEP1O95476 244 aa9.48□□□□□ -0.89
GPN3-207ENST00000550228 NDUFB10O96000 172 aa9.48□□□□□ -0.89
GPN3-207ENST00000550228 PARP1P09874 1014 aaKnown RBP9.48□□□□□ -0.89
GPN3-207ENST00000550228 PDHBP11177 359 aa9.48□□□□□ -0.89
GPN3-207ENST00000550228 KIF5BP33176 963 aa9.48□□□□□ -0.89
GPN3-207ENST00000550228 FOSBP53539 338 aa9.48□□□□□ -0.89
GPN3-207ENST00000550228 RCAN1P53805 252 aa9.48□□□□□ -0.89
GPN3-207ENST00000550228 KLRC3Q07444 240 aa9.48□□□□□ -0.89
GPN3-207ENST00000550228 SPP2Q13103 211 aa9.48□□□□□ -0.89
GPN3-207ENST00000550228 DGKZQ13574 1117 aa9.48□□□□□ -0.89
GPN3-207ENST00000550228 MTMR2Q13614 643 aa9.48□□□□□ -0.89
GPN3-207ENST00000550228 MAP3K11Q16584 847 aa9.48□□□□□ -0.89
GPN3-207ENST00000550228 CPLX2Q6PUV4 134 aaKnown RBP9.48□□□□□ -0.89
GPN3-207ENST00000550228 USP17L2Q6R6M4 530 aa9.48□□□□□ -0.89
GPN3-207ENST00000550228 SPICE1Q8N0Z3 855 aa9.48□□□□□ -0.89
GPN3-207ENST00000550228 STAG2Q8N3U4 1231 aa9.48□□□□□ -0.89
GPN3-207ENST00000550228 CCDC82Q8N4S0 544 aa9.48□□□□□ -0.89
GPN3-207ENST00000550228 ZNF784Q8NCA9 323 aaPredicted RBP9.48□□□□□ -0.89
GPN3-207ENST00000550228 SMC1BQ8NDV3 1235 aa9.48□□□□□ -0.89
GPN3-207ENST00000550228 MKL1Q969V6 931 aa9.48□□□□□ -0.89
GPN3-207ENST00000550228 DDX11Q96FC9 970 aa9.48□□□□□ -0.89
GPN3-207ENST00000550228 OTUD5Q96G74 571 aa9.48□□□□□ -0.89
GPN3-207ENST00000550228 NUP88Q99567 741 aaPredicted RBP9.48□□□□□ -0.89
GPN3-207ENST00000550228 GOPCQ9HD26 462 aa9.48□□□□□ -0.89
GPN3-207ENST00000550228 FAM217BQ9NTX9 383 aaPredicted RBP9.48□□□□□ -0.89
GPN3-207ENST00000550228 RBM28Q9NW13 759 aaKnown RBP9.48□□□□□ -0.89
GPN3-207ENST00000550228 MAD2L2Q9UI95 211 aa9.48□□□□□ -0.89
GPN3-207ENST00000550228 TMX2Q9Y320 296 aa9.48□□□□□ -0.89
GPN3-207ENST00000550228 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.48□□□□□ -0.89
GPN3-207ENST00000550228 BAZ2BQ9UIF8 2168 aaKnown RBP9.48□□□□□ -0.89
GPN3-207ENST00000550228 PTPRFP10586 1907 aa9.47□□□□□ -0.89
GPN3-207ENST00000550228 CCDC196A0A1B0GTZ2 297 aa9.47□□□□□ -0.89
GPN3-207ENST00000550228 USP17L10C9JJH3 530 aa9.47□□□□□ -0.89
GPN3-207ENST00000550228 DHX16O60231 1041 aaKnown RBP9.47□□□□□ -0.89
GPN3-207ENST00000550228 CDKL5O76039 1030 aa9.47□□□□□ -0.89
GPN3-207ENST00000550228 GJB2P29033 226 aa9.47□□□□□ -0.89
GPN3-207ENST00000550228 SLC1A4P43007 532 aa9.47□□□□□ -0.89
GPN3-207ENST00000550228 FKBP1BP68106 108 aa9.47□□□□□ -0.89
GPN3-207ENST00000550228 ZNF543Q08ER8 600 aa9.47□□□□□ -0.89
GPN3-207ENST00000550228 ASPRV1Q53RT3 343 aa9.47□□□□□ -0.89
GPN3-207ENST00000550228 KIAA1755Q5JYT7 1200 aa9.47□□□□□ -0.89
GPN3-207ENST00000550228 SAMD1Q6SPF0 538 aaPredicted RBP9.47□□□□□ -0.89
GPN3-207ENST00000550228 TMTC3Q6ZXV5 915 aa9.47□□□□□ -0.89
GPN3-207ENST00000550228 KCTD1Q719H9 257 aa9.47□□□□□ -0.89
GPN3-207ENST00000550228 ZNF280CQ8ND82 737 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms