RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 SLC15A2Q16348 729 aa11.47□□□□□ -0.57
RAB5B-206ENST00000549505 TEX11Q8IYF3 940 aa11.47□□□□□ -0.57
RAB5B-206ENST00000549505 PNMA1Q8ND90 353 aa11.47□□□□□ -0.57
RAB5B-206ENST00000549505 KAT14Q9H8E8 782 aa11.47□□□□□ -0.57
RAB5B-206ENST00000549505 SPTLC3Q9NUV7 552 aa11.47□□□□□ -0.57
RAB5B-206ENST00000549505 PDE4CQ08493 712 aa11.47□□□□□ -0.57
RAB5B-206ENST00000549505 KANK3Q6NY19 840 aa11.47□□□□□ -0.57
RAB5B-206ENST00000549505 KRBA2Q6ZNG9 492 aa11.47□□□□□ -0.57
RAB5B-206ENST00000549505 C4orf32Q8N8J7 132 aa11.47□□□□□ -0.57
RAB5B-206ENST00000549505 PYM1Q9BRP8 204 aaKnown RBP11.47□□□□□ -0.57
RAB5B-206ENST00000549505 NAT10Q9H0A0 1025 aaKnown RBP11.47□□□□□ -0.57
RAB5B-206ENST00000549505 A0A1B0GVL5 298 aa11.46□□□□□ -0.57
RAB5B-206ENST00000549505 TOP1P11387 765 aaKnown RBP11.46□□□□□ -0.57
RAB5B-206ENST00000549505 ZNF75DP51815 510 aa11.46□□□□□ -0.57
RAB5B-206ENST00000549505 AKAP17AQ02040 695 aaKnown RBP11.46□□□□□ -0.57
RAB5B-206ENST00000549505 APOBEC3HQ6NTF7 200 aaKnown RBP11.46□□□□□ -0.57
RAB5B-206ENST00000549505 CKAP2LQ8IYA6 745 aa11.46□□□□□ -0.57
RAB5B-206ENST00000549505 CNKSR1Q969H4 720 aa11.46□□□□□ -0.57
RAB5B-206ENST00000549505 TMEM47Q9BQJ4 181 aa11.46□□□□□ -0.57
RAB5B-206ENST00000549505 RIOX1Q9H6W3 641 aa11.46□□□□□ -0.57
RAB5B-206ENST00000549505 BRMS1Q9HCU9 246 aa11.46□□□□□ -0.57
RAB5B-206ENST00000549505 TOMM22Q9NS69 142 aa11.46□□□□□ -0.57
RAB5B-206ENST00000549505 V9GY48 417 aaPredicted RBP11.46□□□□□ -0.57
RAB5B-206ENST00000549505 ARFGEF1Q9Y6D6 1849 aa11.46□□□□□ -0.57
RAB5B-206ENST00000549505 MYH8P13535 1937 aa11.46□□□□□ -0.57
RAB5B-206ENST00000549505 SYKP43405 635 aa11.46□□□□□ -0.57
RAB5B-206ENST00000549505 FAM47AQ5JRC9 791 aa11.46□□□□□ -0.57
RAB5B-206ENST00000549505 DPP8Q6V1X1 898 aaPredicted RBP11.46□□□□□ -0.57
RAB5B-206ENST00000549505 C11orf57Q6ZUT1 292 aaPredicted RBP11.46□□□□□ -0.57
RAB5B-206ENST00000549505 OXER1Q8TDS5 423 aa11.46□□□□□ -0.57
RAB5B-206ENST00000549505 MTMR8Q96EF0 704 aa11.46□□□□□ -0.57
RAB5B-206ENST00000549505 ZC3H12CQ9C0D7 883 aaKnown RBP11.46□□□□□ -0.57
RAB5B-206ENST00000549505 BARHL2Q9NY43 387 aa11.46□□□□□ -0.57
RAB5B-206ENST00000549505 KCNJ14Q9UNX9 436 aa11.46□□□□□ -0.57
RAB5B-206ENST00000549505 SCN9AQ15858 1988 aa11.46□□□□□ -0.58
RAB5B-206ENST00000549505 NMT2O60551 498 aa11.46□□□□□ -0.58
RAB5B-206ENST00000549505 PRDM1O75626 825 aa11.46□□□□□ -0.58
RAB5B-206ENST00000549505 CEBPZQ03701 1054 aaKnown RBP11.46□□□□□ -0.58
RAB5B-206ENST00000549505 DHX8Q14562 1220 aaKnown RBP11.46□□□□□ -0.58
RAB5B-206ENST00000549505 DACT2Q5SW24 774 aa11.46□□□□□ -0.58
RAB5B-206ENST00000549505 ZNF444Q8N0Y2 327 aaPredicted RBP11.46□□□□□ -0.58
RAB5B-206ENST00000549505 SUPT20HQ8NEM7 779 aa11.46□□□□□ -0.58
RAB5B-206ENST00000549505 NUP133Q8WUM0 1156 aa11.46□□□□□ -0.58
RAB5B-206ENST00000549505 GPR101Q96P66 508 aaPredicted RBP11.46□□□□□ -0.58
RAB5B-206ENST00000549505 SERPINA10Q9UK55 444 aa11.46□□□□□ -0.58
RAB5B-206ENST00000549505 KCNH3Q9ULD8 1083 aa11.46□□□□□ -0.58
RAB5B-206ENST00000549505 PCDHA4Q9UN74 947 aa11.46□□□□□ -0.58
RAB5B-206ENST00000549505 TRIM75PA6NK02 468 aa11.45□□□□□ -0.58
RAB5B-206ENST00000549505 LAD1O00515 517 aa11.45□□□□□ -0.58
RAB5B-206ENST00000549505 ACTN4O43707 911 aaKnown RBP11.45□□□□□ -0.58
RAB5B-206ENST00000549505 FOSBP53539 338 aa11.45□□□□□ -0.58
RAB5B-206ENST00000549505 NCAPHQ15003 741 aa11.45□□□□□ -0.58
RAB5B-206ENST00000549505 PPP1R18Q6NYC8 613 aa11.45□□□□□ -0.58
RAB5B-206ENST00000549505 CEP57L1Q8IYX8 460 aa11.45□□□□□ -0.58
RAB5B-206ENST00000549505 MKL1Q969V6 931 aa11.45□□□□□ -0.58
RAB5B-206ENST00000549505 DYNLL2Q96FJ2 89 aa11.45□□□□□ -0.58
RAB5B-206ENST00000549505 ZMYND12Q9H0C1 365 aa11.45□□□□□ -0.58
RAB5B-206ENST00000549505 PCDHB6Q9Y5E3 794 aa11.45□□□□□ -0.58
RAB5B-206ENST00000549505 STXBP3O00186 592 aa11.45□□□□□ -0.58
RAB5B-206ENST00000549505 OFD1O75665 1012 aa11.45□□□□□ -0.58
RAB5B-206ENST00000549505 PRPHP41219 470 aa11.45□□□□□ -0.58
RAB5B-206ENST00000549505 MMP14P50281 582 aa11.45□□□□□ -0.58
RAB5B-206ENST00000549505 NR5A1Q13285 461 aa11.45□□□□□ -0.58
RAB5B-206ENST00000549505 OSBPL5Q9H0X9 879 aaPredicted RBP11.45□□□□□ -0.58
RAB5B-206ENST00000549505 CYTH3O43739 400 aa11.44□□□□□ -0.58
RAB5B-206ENST00000549505 TSPY3P0CV98 308 aa11.44□□□□□ -0.58
RAB5B-206ENST00000549505 TSPY8P0CW00 308 aa11.44□□□□□ -0.58
RAB5B-206ENST00000549505 BRCA1P38398 1863 aaKnown RBP11.44□□□□□ -0.58
RAB5B-206ENST00000549505 LUZP1Q86V48 1076 aa11.44□□□□□ -0.58
RAB5B-206ENST00000549505 CCDC148Q8NFR7 591 aa11.44□□□□□ -0.58
RAB5B-206ENST00000549505 ARID3AQ99856 593 aa11.44□□□□□ -0.58
RAB5B-206ENST00000549505 DNAJC25Q9H1X3 360 aa11.44□□□□□ -0.58
RAB5B-206ENST00000549505 DHX36Q9H2U1 1008 aaKnown RBP11.44□□□□□ -0.58
RAB5B-206ENST00000549505 MKNK2Q9HBH9 465 aa11.44□□□□□ -0.58
RAB5B-206ENST00000549505 C6orf229H3BNL8 230 aa11.44□□□□□ -0.58
RAB5B-206ENST00000549505 GTF2IP78347 998 aa11.44□□□□□ -0.58
RAB5B-206ENST00000549505 KIAA2012Q0VF49 1180 aa11.44□□□□□ -0.58
RAB5B-206ENST00000549505 EARS2Q5JPH6 523 aaKnown RBP11.44□□□□□ -0.58
RAB5B-206ENST00000549505 CCDC17Q96LX7 622 aa11.44□□□□□ -0.58
RAB5B-206ENST00000549505 PSMD1Q99460 953 aa11.44□□□□□ -0.58
RAB5B-206ENST00000549505 MTMR4Q9NYA4 1195 aa11.44□□□□□ -0.58
RAB5B-206ENST00000549505 FAM13BQ9NYF5 915 aa11.44□□□□□ -0.58
RAB5B-206ENST00000549505 VPS54Q9P1Q0 977 aa11.44□□□□□ -0.58
RAB5B-206ENST00000549505 ASPRV1Q53RT3 343 aa11.44□□□□□ -0.58
RAB5B-206ENST00000549505 C2CD5Q86YS7 1000 aa11.44□□□□□ -0.58
RAB5B-206ENST00000549505 MAPKAPK5Q8IW41 473 aa11.44□□□□□ -0.58
RAB5B-206ENST00000549505 SLC16A10Q8TF71 515 aa11.44□□□□□ -0.58
RAB5B-206ENST00000549505 PIBF1Q8WXW3 757 aa11.44□□□□□ -0.58
RAB5B-206ENST00000549505 HOOK1Q9UJC3 728 aaKnown RBP11.44□□□□□ -0.58
RAB5B-206ENST00000549505 GOLGA6L6A8MZA4 724 aa11.43□□□□□ -0.58
RAB5B-206ENST00000549505 H0YIN7 160 aa11.43□□□□□ -0.58
RAB5B-206ENST00000549505 PPFIA3O75145 1194 aa11.43□□□□□ -0.58
RAB5B-206ENST00000549505 GNL2Q13823 731 aaKnown RBP11.43□□□□□ -0.58
RAB5B-206ENST00000549505 CDC42EP5Q6NZY7 148 aa11.43□□□□□ -0.58
RAB5B-206ENST00000549505 TATDN1Q6P1N9 297 aa11.43□□□□□ -0.58
RAB5B-206ENST00000549505 BLIDQ8IZY5 108 aa11.43□□□□□ -0.58
RAB5B-206ENST00000549505 HSD3B7Q9H2F3 369 aa11.43□□□□□ -0.58
RAB5B-206ENST00000549505 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.43□□□□□ -0.581e-6■■■■□ 19.4
RAB5B-206ENST00000549505 SMTNL1A8MU46 457 aa11.43□□□□□ -0.58
RAB5B-206ENST00000549505 SHMT1P34896 483 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms