RNA–Protein interactions for RNA: ENST00000549047.5

ARFGAP1-221, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 5

Gene ARFGAP1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-221ENST00000549047 CCNA1P78396 465 aa18.17■□□□□ 0.5
ARFGAP1-221ENST00000549047 ZMYM1Q5SVZ6 1142 aa18.17■□□□□ 0.5
ARFGAP1-221ENST00000549047 PLEKHH3Q7Z736 793 aa18.17■□□□□ 0.5
ARFGAP1-221ENST00000549047 SPICE1Q8N0Z3 855 aa18.17■□□□□ 0.5
ARFGAP1-221ENST00000549047 STK11IPQ8N1F8 1099 aa18.17■□□□□ 0.5
ARFGAP1-221ENST00000549047 VCPKMTQ9H867 229 aa18.17■□□□□ 0.5
ARFGAP1-221ENST00000549047 KANSL2Q9H9L4 492 aa18.17■□□□□ 0.5
ARFGAP1-221ENST00000549047 CWC22Q9HCG8 908 aaKnown RBP18.17■□□□□ 0.5
ARFGAP1-221ENST00000549047 BTBD7Q9P203 1132 aa18.17■□□□□ 0.5
ARFGAP1-221ENST00000549047 STAP2Q9UGK3 403 aa18.17■□□□□ 0.5
ARFGAP1-221ENST00000549047 ROBO3Q96MS0 1386 aa18.17■□□□□ 0.5
ARFGAP1-221ENST00000549047 PATL2C9JE40 543 aaKnown RBP18.16■□□□□ 0.5
ARFGAP1-221ENST00000549047 EEF2P13639 858 aaKnown RBP18.16■□□□□ 0.5
ARFGAP1-221ENST00000549047 RASA1P20936 1047 aa18.16■□□□□ 0.5
ARFGAP1-221ENST00000549047 PDE1AP54750 535 aa18.16■□□□□ 0.5
ARFGAP1-221ENST00000549047 ATP2B2Q01814 1243 aa18.16■□□□□ 0.5
ARFGAP1-221ENST00000549047 COG2Q14746 738 aa18.16■□□□□ 0.5
ARFGAP1-221ENST00000549047 TRIB2Q92519 343 aa18.16■□□□□ 0.5
ARFGAP1-221ENST00000549047 DEFB118Q96PH6 123 aa18.16■□□□□ 0.5
ARFGAP1-221ENST00000549047 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.16■□□□□ 0.5
ARFGAP1-221ENST00000549047 MKNK2Q9HBH9 465 aa18.16■□□□□ 0.5
ARFGAP1-221ENST00000549047 PAK6Q9NQU5 681 aaPredicted RBP18.16■□□□□ 0.5
ARFGAP1-221ENST00000549047 HOXC10Q9NYD6 342 aa18.16■□□□□ 0.5
ARFGAP1-221ENST00000549047 SGPL1O95470 568 aa18.15■□□□□ 0.5
ARFGAP1-221ENST00000549047 XRCC5P13010 732 aaKnown RBP18.15■□□□□ 0.5
ARFGAP1-221ENST00000549047 TRIM32Q13049 653 aa18.15■□□□□ 0.5
ARFGAP1-221ENST00000549047 MORN1Q5T089 497 aa18.15■□□□□ 0.5
ARFGAP1-221ENST00000549047 UBE2Q1Q7Z7E8 422 aa18.15■□□□□ 0.5
ARFGAP1-221ENST00000549047 IFNL3Q8IZI9 196 aa18.15■□□□□ 0.5
ARFGAP1-221ENST00000549047 EXOC6Q8TAG9 804 aa18.15■□□□□ 0.5
ARFGAP1-221ENST00000549047 USP6NLQ92738 828 aa18.15■□□□□ 0.5
ARFGAP1-221ENST00000549047 NACAP1Q9BZK3 213 aa18.15■□□□□ 0.5
ARFGAP1-221ENST00000549047 LNPKQ9C0E8 428 aa18.15■□□□□ 0.5
ARFGAP1-221ENST00000549047 RWDD1Q9H446 243 aaPredicted RBP18.15■□□□□ 0.5
ARFGAP1-221ENST00000549047 FLOT1O75955 427 aa18.14■□□□□ 0.49
ARFGAP1-221ENST00000549047 RGS2P41220 211 aa18.14■□□□□ 0.49
ARFGAP1-221ENST00000549047 WDR78Q5VTH9 848 aa18.14■□□□□ 0.49
ARFGAP1-221ENST00000549047 SMC5Q8IY18 1101 aa18.14■□□□□ 0.49
ARFGAP1-221ENST00000549047 EVI5LQ96CN4 794 aa18.14■□□□□ 0.49
ARFGAP1-221ENST00000549047 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.14■□□□□ 0.493e-16■■■□□ 15.4
ARFGAP1-221ENST00000549047 DOCK3Q8IZD9 2030 aa18.14■□□□□ 0.49
ARFGAP1-221ENST00000549047 WDR46O15213 610 aaKnown RBP18.13■□□□□ 0.49
ARFGAP1-221ENST00000549047 FARP2O94887 1054 aaPredicted RBP18.13■□□□□ 0.49
ARFGAP1-221ENST00000549047 TFRCP02786 760 aaKnown RBP18.13■□□□□ 0.49
ARFGAP1-221ENST00000549047 ZKSCAN1P17029 563 aaPredicted RBP18.13■□□□□ 0.49
ARFGAP1-221ENST00000549047 APBA2Q99767 749 aa18.13■□□□□ 0.49
ARFGAP1-221ENST00000549047 PRDM1O75626 825 aa18.12■□□□□ 0.49
ARFGAP1-221ENST00000549047 IGHDP01880 384 aa18.12■□□□□ 0.49
ARFGAP1-221ENST00000549047 PRKAR2AP13861 404 aaKnown RBP18.12■□□□□ 0.49
ARFGAP1-221ENST00000549047 DSG3P32926 999 aa18.12■□□□□ 0.49
ARFGAP1-221ENST00000549047 MAP2K5Q13163 448 aa18.12■□□□□ 0.49
ARFGAP1-221ENST00000549047 CCL14Q16627 93 aa18.12■□□□□ 0.49
ARFGAP1-221ENST00000549047 B4GALNT3Q6L9W6 998 aa18.12■□□□□ 0.49
ARFGAP1-221ENST00000549047 CCDC129Q6ZRS4 1044 aa18.12■□□□□ 0.49
ARFGAP1-221ENST00000549047 TRMT44Q8IYL2 757 aaKnown RBP18.12■□□□□ 0.49
ARFGAP1-221ENST00000549047 MB21D1Q8N884 522 aa18.12■□□□□ 0.49
ARFGAP1-221ENST00000549047 ATG4CQ96DT6 458 aa18.12■□□□□ 0.49
ARFGAP1-221ENST00000549047 MOV10L1Q9BXT6 1211 aaKnown RBP18.12■□□□□ 0.49
ARFGAP1-221ENST00000549047 CRISPLD2Q9H0B8 497 aa18.12■□□□□ 0.49
ARFGAP1-221ENST00000549047 NAPBQ9H115 298 aa18.12■□□□□ 0.49
ARFGAP1-221ENST00000549047 ZNF287Q9HBT7 754 aa18.12■□□□□ 0.49
ARFGAP1-221ENST00000549047 GOPCQ9HD26 462 aa18.12■□□□□ 0.49
ARFGAP1-221ENST00000549047 HMX1Q9NP08 348 aaPredicted RBP18.12■□□□□ 0.49
ARFGAP1-221ENST00000549047 RPTORQ8N122 1335 aa18.12■□□□□ 0.49
ARFGAP1-221ENST00000549047 SLC15A5A6NIM6 579 aa18.11■□□□□ 0.49
ARFGAP1-221ENST00000549047 RAD21O60216 631 aa18.11■□□□□ 0.49
ARFGAP1-221ENST00000549047 PTPREP23469 700 aa18.11■□□□□ 0.49
ARFGAP1-221ENST00000549047 MAP3K21Q5TCX8 1036 aa18.11■□□□□ 0.49
ARFGAP1-221ENST00000549047 SAMD1Q6SPF0 538 aaPredicted RBP18.11■□□□□ 0.49
ARFGAP1-221ENST00000549047 ZNF444Q8N0Y2 327 aaPredicted RBP18.11■□□□□ 0.49
ARFGAP1-221ENST00000549047 SPATC1LQ9H0A9 340 aa18.11■□□□□ 0.49
ARFGAP1-221ENST00000549047 IVNS1ABPQ9Y6Y0 642 aa18.11■□□□□ 0.49
ARFGAP1-221ENST00000549047 PLXNB2O15031 1838 aa18.1■□□□□ 0.49
ARFGAP1-221ENST00000549047 FOXP2O15409 715 aa18.1■□□□□ 0.49
ARFGAP1-221ENST00000549047 CAPN2P17655 700 aa18.1■□□□□ 0.49
ARFGAP1-221ENST00000549047 GRB14Q14449 540 aa18.1■□□□□ 0.49
ARFGAP1-221ENST00000549047 FBXO28Q9NVF7 368 aa18.1■□□□□ 0.49
ARFGAP1-221ENST00000549047 NYAP2Q9P242 653 aa18.1■□□□□ 0.49
ARFGAP1-221ENST00000549047 SUPT16HQ9Y5B9 1047 aaKnown RBP18.1■□□□□ 0.49
ARFGAP1-221ENST00000549047 IGKV6D-41A0A0C4DH26 115 aa18.09■□□□□ 0.49
ARFGAP1-221ENST00000549047 SLC3A2P08195 630 aaKnown RBP18.09■□□□□ 0.49
ARFGAP1-221ENST00000549047 ERCC3P19447 782 aa18.09■□□□□ 0.49
ARFGAP1-221ENST00000549047 NUCB1Q02818 461 aa18.09■□□□□ 0.49
ARFGAP1-221ENST00000549047 PPARAQ07869 468 aa18.09■□□□□ 0.49
ARFGAP1-221ENST00000549047 PLS1Q14651 629 aa18.09■□□□□ 0.49
ARFGAP1-221ENST00000549047 FAM83BQ5T0W9 1011 aa18.09■□□□□ 0.49
ARFGAP1-221ENST00000549047 CHD1LQ86WJ1 897 aa18.09■□□□□ 0.49
ARFGAP1-221ENST00000549047 SHCBP1Q8NEM2 672 aa18.09■□□□□ 0.49
ARFGAP1-221ENST00000549047 MYH8P13535 1937 aa18.09■□□□□ 0.49
ARFGAP1-221ENST00000549047 CEP290O15078 2479 aa18.08■□□□□ 0.49
ARFGAP1-221ENST00000549047 HOXC6P09630 235 aa18.08■□□□□ 0.48
ARFGAP1-221ENST00000549047 PDE4BQ07343 736 aa18.08■□□□□ 0.48
ARFGAP1-221ENST00000549047 CACNB2Q08289 660 aaPredicted RBP18.08■□□□□ 0.48
ARFGAP1-221ENST00000549047 VPS53Q5VIR6 699 aa18.08■□□□□ 0.48
ARFGAP1-221ENST00000549047 DPF3Q92784 378 aa18.08■□□□□ 0.48
ARFGAP1-221ENST00000549047 CEP95Q96GE4 821 aa18.08■□□□□ 0.48
ARFGAP1-221ENST00000549047 FAM227BQ96M60 508 aa18.08■□□□□ 0.48
ARFGAP1-221ENST00000549047 NUP88Q99567 741 aaPredicted RBP18.08■□□□□ 0.48
ARFGAP1-221ENST00000549047 HTATIP2Q9BUP3 242 aa18.08■□□□□ 0.48
ARFGAP1-221ENST00000549047 HELLSQ9NRZ9 838 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms