RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 TTLL1O95922 423 aa11.33□□□□□ -0.6
RAB5B-205ENST00000549034 HSPA8P11142 646 aaKnown RBP11.33□□□□□ -0.6
RAB5B-205ENST00000549034 PPP4R3BQ5MIZ7 849 aa11.33□□□□□ -0.6
RAB5B-205ENST00000549034 CREB3L3Q68CJ9 461 aa11.33□□□□□ -0.6
RAB5B-205ENST00000549034 SPICE1Q8N0Z3 855 aa11.33□□□□□ -0.6
RAB5B-205ENST00000549034 NKX2-3Q8TAU0 364 aa11.33□□□□□ -0.6
RAB5B-205ENST00000549034 MKL1Q969V6 931 aa11.33□□□□□ -0.6
RAB5B-205ENST00000549034 CHMP4CQ96CF2 233 aa11.33□□□□□ -0.6
RAB5B-205ENST00000549034 CNNM2Q9H8M5 875 aa11.33□□□□□ -0.6
RAB5B-205ENST00000549034 GOPCQ9HD26 462 aa11.33□□□□□ -0.6
RAB5B-205ENST00000549034 ZCCHC17Q9NP64 241 aaKnown RBP11.33□□□□□ -0.6
RAB5B-205ENST00000549034 TCP11L1Q9NUJ3 509 aa11.33□□□□□ -0.6
RAB5B-205ENST00000549034 STX8Q9UNK0 236 aa11.33□□□□□ -0.6
RAB5B-205ENST00000549034 SLC45A1Q9Y2W3 748 aa11.33□□□□□ -0.6
RAB5B-205ENST00000549034 NEDD4P46934 1319 aa11.33□□□□□ -0.6
RAB5B-205ENST00000549034 CASP8AP2Q9UKL3 1982 aa11.32□□□□□ -0.6
RAB5B-205ENST00000549034 THSD7BQ9C0I4 1608 aa11.32□□□□□ -0.6
RAB5B-205ENST00000549034 USP17L15C9J2P7 530 aa11.32□□□□□ -0.6
RAB5B-205ENST00000549034 USP17L13C9JLJ4 530 aa11.32□□□□□ -0.6
RAB5B-205ENST00000549034 USP17L11C9JVI0 530 aa11.32□□□□□ -0.6
RAB5B-205ENST00000549034 USP17L18D6R9N7 530 aa11.32□□□□□ -0.6
RAB5B-205ENST00000549034 USP17L22D6RA61 530 aa11.32□□□□□ -0.6
RAB5B-205ENST00000549034 USP17L17D6RBQ6 530 aa11.32□□□□□ -0.6
RAB5B-205ENST00000549034 USP17L19D6RCP7 530 aa11.32□□□□□ -0.6
RAB5B-205ENST00000549034 USP17L20D6RJB6 530 aa11.32□□□□□ -0.6
RAB5B-205ENST00000549034 F5H6K3 240 aa11.32□□□□□ -0.6
RAB5B-205ENST00000549034 GPR25O00155 361 aa11.32□□□□□ -0.6
RAB5B-205ENST00000549034 SLC27A2O14975 620 aa11.32□□□□□ -0.6
RAB5B-205ENST00000549034 REC8O95072 547 aa11.32□□□□□ -0.6
RAB5B-205ENST00000549034 HOXA7P31268 230 aaPredicted RBP11.32□□□□□ -0.6
RAB5B-205ENST00000549034 IRX3P78415 501 aaPredicted RBP11.32□□□□□ -0.6
RAB5B-205ENST00000549034 KLRC3Q07444 240 aa11.32□□□□□ -0.6
RAB5B-205ENST00000549034 USP17L24Q0WX57 530 aa11.32□□□□□ -0.6
RAB5B-205ENST00000549034 KIAA1755Q5JYT7 1200 aa11.32□□□□□ -0.6
RAB5B-205ENST00000549034 RNF20Q5VTR2 975 aa11.32□□□□□ -0.6
RAB5B-205ENST00000549034 CATSPERGQ6ZRH7 1159 aa11.32□□□□□ -0.6
RAB5B-205ENST00000549034 NCOA7Q8NI08 942 aa11.32□□□□□ -0.6
RAB5B-205ENST00000549034 C12orf42Q96LP6 360 aa11.32□□□□□ -0.6
RAB5B-205ENST00000549034 P2RX7Q99572 595 aaKnown RBP11.32□□□□□ -0.6
RAB5B-205ENST00000549034 ASCC2Q9H1I8 757 aaPredicted RBP11.32□□□□□ -0.6
RAB5B-205ENST00000549034 RPAP3Q9H6T3 665 aaPredicted RBP11.32□□□□□ -0.6
RAB5B-205ENST00000549034 VCPKMTQ9H867 229 aa11.32□□□□□ -0.6
RAB5B-205ENST00000549034 CPA4Q9UI42 421 aa11.32□□□□□ -0.6
RAB5B-205ENST00000549034 PNMA3Q9UL41 463 aa11.32□□□□□ -0.6
RAB5B-205ENST00000549034 MYH4Q9Y623 1939 aa11.32□□□□□ -0.6
RAB5B-205ENST00000549034 TLR2O60603 784 aa11.31□□□□□ -0.6
RAB5B-205ENST00000549034 ECM2O94769 699 aaPredicted RBP11.31□□□□□ -0.6
RAB5B-205ENST00000549034 VCAM1P19320 739 aa11.31□□□□□ -0.6
RAB5B-205ENST00000549034 CCDC178Q5BJE1 867 aa11.31□□□□□ -0.6
RAB5B-205ENST00000549034 CYB5R4Q7L1T6 521 aa11.31□□□□□ -0.6
RAB5B-205ENST00000549034 CHST3Q7LGC8 479 aa11.31□□□□□ -0.6
RAB5B-205ENST00000549034 RALYLQ86SE5 291 aaKnown RBP11.31□□□□□ -0.6
RAB5B-205ENST00000549034 IQCA1Q86XH1 822 aa11.31□□□□□ -0.6
RAB5B-205ENST00000549034 LRRC47Q8N1G4 583 aaKnown RBP11.31□□□□□ -0.6
RAB5B-205ENST00000549034 SMCR8Q8TEV9 937 aaPredicted RBP11.31□□□□□ -0.6
RAB5B-205ENST00000549034 TTC14Q96N46 770 aa11.31□□□□□ -0.6
RAB5B-205ENST00000549034 PARK7Q99497 189 aaKnown RBP11.31□□□□□ -0.6
RAB5B-205ENST00000549034 CFHR5Q9BXR6 569 aa11.31□□□□□ -0.6
RAB5B-205ENST00000549034 HOXC10Q9NYD6 342 aa11.31□□□□□ -0.6
RAB5B-205ENST00000549034 MTMR7Q9Y216 660 aa11.31□□□□□ -0.6
RAB5B-205ENST00000549034 TAF6LQ9Y6J9 622 aa11.31□□□□□ -0.6
RAB5B-205ENST00000549034 FKTNO75072 461 aa11.3□□□□□ -0.6
RAB5B-205ENST00000549034 ZKSCAN1P17029 563 aaPredicted RBP11.3□□□□□ -0.6
RAB5B-205ENST00000549034 MCCP23508 829 aa11.3□□□□□ -0.6
RAB5B-205ENST00000549034 NT5C2P49902 561 aa11.3□□□□□ -0.6
RAB5B-205ENST00000549034 SP3Q02447 781 aa11.3□□□□□ -0.6
RAB5B-205ENST00000549034 COG2Q14746 738 aa11.3□□□□□ -0.6
RAB5B-205ENST00000549034 SLFN13Q68D06 897 aa11.3□□□□□ -0.6
RAB5B-205ENST00000549034 C17orf99Q6UX52 265 aa11.3□□□□□ -0.6
RAB5B-205ENST00000549034 STOX1Q6ZVD7 989 aa11.3□□□□□ -0.6
RAB5B-205ENST00000549034 DGKHQ86XP1 1220 aa11.3□□□□□ -0.6
RAB5B-205ENST00000549034 ZNF296Q8WUU4 475 aaPredicted RBP11.3□□□□□ -0.6
RAB5B-205ENST00000549034 LPAR1Q92633 364 aa11.3□□□□□ -0.6
RAB5B-205ENST00000549034 ZSCAN10Q96SZ4 725 aaPredicted RBP11.3□□□□□ -0.6
RAB5B-205ENST00000549034 TMEM47Q9BQJ4 181 aa11.3□□□□□ -0.6
RAB5B-205ENST00000549034 UBAC1Q9BSL1 405 aa11.3□□□□□ -0.6
RAB5B-205ENST00000549034 TANGO6Q9C0B7 1094 aa11.3□□□□□ -0.6
RAB5B-205ENST00000549034 ISY1Q9ULR0 285 aaKnown RBP11.3□□□□□ -0.6
RAB5B-205ENST00000549034 GREB1LQ9C091 1923 aaPredicted RBP11.29□□□□□ -0.6
RAB5B-205ENST00000549034 ERICH2A1L162 156 aa11.29□□□□□ -0.6
RAB5B-205ENST00000549034 IFIT3O14879 490 aaKnown RBP11.29□□□□□ -0.6
RAB5B-205ENST00000549034 WDR46O15213 610 aaKnown RBP11.29□□□□□ -0.6
RAB5B-205ENST00000549034 NDUFB10O96000 172 aa11.29□□□□□ -0.6
RAB5B-205ENST00000549034 TOP1P11387 765 aaKnown RBP11.29□□□□□ -0.6
RAB5B-205ENST00000549034 HERVK_113P62684 666 aa11.29□□□□□ -0.6
RAB5B-205ENST00000549034 FAM83BQ5T0W9 1011 aa11.29□□□□□ -0.6
RAB5B-205ENST00000549034 ANKRD13CQ8N6S4 541 aa11.29□□□□□ -0.6
RAB5B-205ENST00000549034 NUP88Q99567 741 aaPredicted RBP11.29□□□□□ -0.6
RAB5B-205ENST00000549034 USP26Q9BXU7 913 aa11.29□□□□□ -0.6
RAB5B-205ENST00000549034 PRDM10Q9NQV6 1147 aa11.29□□□□□ -0.6
RAB5B-205ENST00000549034 LAMA4Q16363 1823 aa11.29□□□□□ -0.6
RAB5B-205ENST00000549034 CEP350Q5VT06 3117 aa11.29□□□□□ -0.6
RAB5B-205ENST00000549034 PLIN4Q96Q06 1357 aa11.28□□□□□ -0.6
RAB5B-205ENST00000549034 FLOT1O75955 427 aa11.28□□□□□ -0.6
RAB5B-205ENST00000549034 BMP3P12645 472 aa11.28□□□□□ -0.6
RAB5B-205ENST00000549034 HSPA4P34932 840 aa11.28□□□□□ -0.6
RAB5B-205ENST00000549034 SLC1A4P43007 532 aa11.28□□□□□ -0.6
RAB5B-205ENST00000549034 GCLCP48506 637 aaPredicted RBP11.28□□□□□ -0.6
RAB5B-205ENST00000549034 NOVP48745 357 aa11.28□□□□□ -0.6
RAB5B-205ENST00000549034 KIF22Q14807 665 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms