RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 PTGDRQ13258 359 aa16.03■□□□□ 0.16
RAPGEF3-218ENST00000548919 KRT31Q15323 416 aa16.03■□□□□ 0.16
RAPGEF3-218ENST00000548919 ESR2Q92731 530 aa16.03■□□□□ 0.16
RAPGEF3-218ENST00000548919 ARAP2Q8WZ64 1704 aa16.03■□□□□ 0.16
RAPGEF3-218ENST00000548919 ITGB4P16144 1822 aa16.02■□□□□ 0.16
RAPGEF3-218ENST00000548919 XDHP47989 1333 aa16.02■□□□□ 0.16
RAPGEF3-218ENST00000548919 ADAMTS3O15072 1205 aa16.02■□□□□ 0.16
RAPGEF3-218ENST00000548919 XBP1P17861 261 aa16.02■□□□□ 0.16
RAPGEF3-218ENST00000548919 FILIP1LQ4L180 1135 aa16.02■□□□□ 0.16
RAPGEF3-218ENST00000548919 GSDMAQ96QA5 445 aa16.02■□□□□ 0.16
RAPGEF3-218ENST00000548919 SOS2Q07890 1332 aaPredicted RBP16.02■□□□□ 0.15
RAPGEF3-218ENST00000548919 N4BP3O15049 544 aa16.02■□□□□ 0.15
RAPGEF3-218ENST00000548919 RRAGBQ5VZM2 374 aa16.02■□□□□ 0.15
RAPGEF3-218ENST00000548919 CTAGE1Q96RT6 745 aa16.02■□□□□ 0.15
RAPGEF3-218ENST00000548919 ZSCAN10Q96SZ4 725 aaPredicted RBP16.02■□□□□ 0.15
RAPGEF3-218ENST00000548919 TAB2Q9NYJ8 693 aa16.02■□□□□ 0.15
RAPGEF3-218ENST00000548919 NPY5RQ15761 445 aa16.01■□□□□ 0.15
RAPGEF3-218ENST00000548919 TTC38Q5R3I4 469 aa16.01■□□□□ 0.15
RAPGEF3-218ENST00000548919 IFIT1BQ5T764 474 aaKnown RBP16.01■□□□□ 0.15
RAPGEF3-218ENST00000548919 MTRQ99707 1265 aa16.01■□□□□ 0.15
RAPGEF3-218ENST00000548919 PDE11AQ9HCR9 933 aa16.01■□□□□ 0.15
RAPGEF3-218ENST00000548919 ADAM21Q9UKJ8 722 aa16.01■□□□□ 0.15
RAPGEF3-218ENST00000548919 LRP5O75197 1615 aa16.01■□□□□ 0.15
RAPGEF3-218ENST00000548919 CTAGE9A4FU28 777 aa16.01■□□□□ 0.15
RAPGEF3-218ENST00000548919 VEGFAP15692 232 aaPredicted RBP16.01■□□□□ 0.15
RAPGEF3-218ENST00000548919 DYNLL1P63167 89 aaKnown RBP16.01■□□□□ 0.15
RAPGEF3-218ENST00000548919 BRD3Q15059 726 aa16.01■□□□□ 0.15
RAPGEF3-218ENST00000548919 BEND6Q5SZJ8 279 aaPredicted RBP16.01■□□□□ 0.15
RAPGEF3-218ENST00000548919 CNGA4Q8IV77 575 aa16.01■□□□□ 0.15
RAPGEF3-218ENST00000548919 NUP88Q99567 741 aaPredicted RBP16.01■□□□□ 0.15
RAPGEF3-218ENST00000548919 TMEM51Q9NW97 253 aa16.01■□□□□ 0.15
RAPGEF3-218ENST00000548919 BAZ2AQ9UIF9 1905 aaKnown RBP16.01■□□□□ 0.15
RAPGEF3-218ENST00000548919 RTL9Q8NET4 1388 aa16.01■□□□□ 0.15
RAPGEF3-218ENST00000548919 MAGEB6P1A0A0J9YX57 407 aa16■□□□□ 0.15
RAPGEF3-218ENST00000548919 MAP2K7O14733 419 aa16■□□□□ 0.15
RAPGEF3-218ENST00000548919 NMT2O60551 498 aa16■□□□□ 0.15
RAPGEF3-218ENST00000548919 N4BP1O75113 896 aaKnown RBP16■□□□□ 0.15
RAPGEF3-218ENST00000548919 CAPN2P17655 700 aa16■□□□□ 0.15
RAPGEF3-218ENST00000548919 JAKMIP3Q5VZ66 844 aa16■□□□□ 0.15
RAPGEF3-218ENST00000548919 TXLNBQ8N3L3 684 aa16■□□□□ 0.15
RAPGEF3-218ENST00000548919 FERMT2Q96AC1 680 aa16■□□□□ 0.15
RAPGEF3-218ENST00000548919 ABCB6Q9NP58 842 aa16■□□□□ 0.15
RAPGEF3-218ENST00000548919 PRPF3O43395 683 aaKnown RBP16■□□□□ 0.15
RAPGEF3-218ENST00000548919 GYG1P46976 350 aa16■□□□□ 0.15
RAPGEF3-218ENST00000548919 RCAN1P53805 252 aa16■□□□□ 0.15
RAPGEF3-218ENST00000548919 IL17AQ16552 155 aa16■□□□□ 0.15
RAPGEF3-218ENST00000548919 CATIPQ7Z7H3 387 aa16■□□□□ 0.15
RAPGEF3-218ENST00000548919 CEP112Q8N8E3 955 aa16■□□□□ 0.15
RAPGEF3-218ENST00000548919 TNFRSF25Q93038 417 aa16■□□□□ 0.15
RAPGEF3-218ENST00000548919 SLF1Q9BQI6 1058 aa16■□□□□ 0.15
RAPGEF3-218ENST00000548919 ABHD10Q9NUJ1 306 aa16■□□□□ 0.15
RAPGEF3-218ENST00000548919 MCM7P33993 719 aa15.99■□□□□ 0.15
RAPGEF3-218ENST00000548919 LMAN1P49257 510 aa15.99■□□□□ 0.15
RAPGEF3-218ENST00000548919 CHRNDQ07001 517 aa15.99■□□□□ 0.15
RAPGEF3-218ENST00000548919 PIK3AP1Q6ZUJ8 805 aa15.99■□□□□ 0.15
RAPGEF3-218ENST00000548919 TRIM10Q9UDY6 481 aa15.99■□□□□ 0.15
RAPGEF3-218ENST00000548919 A0A0G2JS52 829 aa15.99■□□□□ 0.15
RAPGEF3-218ENST00000548919 ERVV-1B6SEH8 477 aa15.99■□□□□ 0.15
RAPGEF3-218ENST00000548919 ARHGAP25P42331 645 aa15.99■□□□□ 0.15
RAPGEF3-218ENST00000548919 VSNL1P62760 191 aa15.99■□□□□ 0.15
RAPGEF3-218ENST00000548919 RAD51AP2Q09MP3 1159 aa15.99■□□□□ 0.15
RAPGEF3-218ENST00000548919 TROAPQ12815 778 aa15.99■□□□□ 0.15
RAPGEF3-218ENST00000548919 E2F4Q16254 413 aa15.99■□□□□ 0.15
RAPGEF3-218ENST00000548919 NCAPH2Q6IBW4 605 aa15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 NOA1Q8NC60 698 aaKnown RBP15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 CHP1Q99653 195 aa15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 MTA3Q9BTC8 594 aa15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 PODXL2Q9NZ53 605 aa15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 VPS18Q9P253 973 aa15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 TFR2Q9UP52 801 aa15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 GDAQ9Y2T3 454 aa15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 IGHMBP2P38935 993 aaKnown RBP15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 COPB1P53618 953 aaKnown RBP15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 ATP2C1P98194 919 aaPredicted RBP15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 GPS2Q13227 327 aa15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 CT47A1Q5JQC4 288 aaPredicted RBP15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 PDXDC2PQ6P474 469 aa15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 SRBD1Q8N5C6 995 aaKnown RBP15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 NELFBQ8WX92 580 aa15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 NAPGQ99747 312 aaPredicted RBP15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 TTF2Q9UNY4 1162 aaKnown RBP15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 BCL9O00512 1426 aa15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 TULP2O00295 520 aa15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 SEMA3EO15041 775 aa15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 IL6STP40189 918 aaPredicted RBP15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 ZSCAN26Q16670 478 aa15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 IQUBQ8NA54 791 aa15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 MSANTD4Q8NCY6 345 aa15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 RIOK1Q9BRS2 568 aaKnown RBP15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 LIMA1Q9UHB6 759 aaKnown RBP15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 RAB21Q9UL25 225 aa15.98■□□□□ 0.15
RAPGEF3-218ENST00000548919 COL4A1P02462 1669 aa15.97■□□□□ 0.15
RAPGEF3-218ENST00000548919 PLCH1Q4KWH8 1693 aa15.97■□□□□ 0.15
RAPGEF3-218ENST00000548919 KCNJ18B7U540 433 aa15.97■□□□□ 0.15
RAPGEF3-218ENST00000548919 KRT9P35527 623 aa15.97■□□□□ 0.15
RAPGEF3-218ENST00000548919 PAK1Q13153 545 aa15.97■□□□□ 0.15
RAPGEF3-218ENST00000548919 KCNJ12Q14500 433 aa15.97■□□□□ 0.15
RAPGEF3-218ENST00000548919 TCP11X2Q5H9J9 407 aa15.97■□□□□ 0.15
RAPGEF3-218ENST00000548919 TMTC1Q8IUR5 882 aa15.97■□□□□ 0.15
RAPGEF3-218ENST00000548919 BRMS1Q9HCU9 246 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms