RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 LUC7L2Q9Y383 392 aaKnown RBP15.99■□□□□ 0.15
CACNB3-209ENST00000548860 PDE4DQ08499 809 aa15.99■□□□□ 0.15
CACNB3-209ENST00000548860 SPA17Q15506 151 aa15.99■□□□□ 0.15
CACNB3-209ENST00000548860 RESP18Q5W5W9 173 aa15.99■□□□□ 0.15
CACNB3-209ENST00000548860 C10orf67Q8IYJ2 551 aa15.99■□□□□ 0.15
CACNB3-209ENST00000548860 ENAHQ8N8S7 591 aaPredicted RBP15.99■□□□□ 0.15
CACNB3-209ENST00000548860 AK7Q96M32 723 aa15.99■□□□□ 0.15
CACNB3-209ENST00000548860 ALDH8A1Q9H2A2 487 aaPredicted RBP15.99■□□□□ 0.15
CACNB3-209ENST00000548860 EXOC1Q9NV70 894 aa15.99■□□□□ 0.15
CACNB3-209ENST00000548860 CAPN2P17655 700 aa15.98■□□□□ 0.15
CACNB3-209ENST00000548860 SRGAP2O75044 1071 aa15.98■□□□□ 0.15
CACNB3-209ENST00000548860 RFC4P35249 363 aa15.98■□□□□ 0.15
CACNB3-209ENST00000548860 TECP42680 631 aa15.98■□□□□ 0.15
CACNB3-209ENST00000548860 EARS2Q5JPH6 523 aaKnown RBP15.98■□□□□ 0.15
CACNB3-209ENST00000548860 NCAPH2Q6IBW4 605 aa15.98■□□□□ 0.15
CACNB3-209ENST00000548860 CCDC148Q8NFR7 591 aa15.98■□□□□ 0.15
CACNB3-209ENST00000548860 CRACR2AQ9BSW2 395 aa15.98■□□□□ 0.15
CACNB3-209ENST00000548860 RSPH14Q9UHP6 348 aa15.98■□□□□ 0.15
CACNB3-209ENST00000548860 DDX41Q9UJV9 622 aaKnown RBP15.98■□□□□ 0.15
CACNB3-209ENST00000548860 PPP6R2O75170 966 aa15.98■□□□□ 0.15
CACNB3-209ENST00000548860 VEGFAP15692 232 aaPredicted RBP15.98■□□□□ 0.15
CACNB3-209ENST00000548860 PAK1Q13153 545 aa15.98■□□□□ 0.15
CACNB3-209ENST00000548860 SMC1AQ14683 1233 aaKnown RBP15.98■□□□□ 0.15
CACNB3-209ENST00000548860 CSGALNACT2Q8N6G5 542 aa15.98■□□□□ 0.15
CACNB3-209ENST00000548860 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.98■□□□□ 0.15
CACNB3-209ENST00000548860 PALLDQ8WX93 1383 aa15.98■□□□□ 0.15
CACNB3-209ENST00000548860 SRCAPQ6ZRS2 3230 aa15.97■□□□□ 0.15
CACNB3-209ENST00000548860 KCTD19Q17RG1 926 aaPredicted RBP15.97■□□□□ 0.15
CACNB3-209ENST00000548860 SUGCTQ9HAC7 445 aa15.97■□□□□ 0.15
CACNB3-209ENST00000548860 NCAPD2Q15021 1401 aa15.97■□□□□ 0.15
CACNB3-209ENST00000548860 LDHBP07195 334 aaKnown RBP15.97■□□□□ 0.15
CACNB3-209ENST00000548860 RPS8P62241 208 aaKnown RBP15.97■□□□□ 0.15
CACNB3-209ENST00000548860 CACNB1Q02641 598 aaPredicted RBP15.97■□□□□ 0.15
CACNB3-209ENST00000548860 NLRC4Q9NPP4 1024 aa15.97■□□□□ 0.15
CACNB3-209ENST00000548860 ARID4AP29374 1257 aaPredicted RBP15.97■□□□□ 0.15
CACNB3-209ENST00000548860 ADGRA1Q86SQ6 560 aa15.97■□□□□ 0.15
CACNB3-209ENST00000548860 PAGE5Q96GU1 130 aa15.97■□□□□ 0.15
CACNB3-209ENST00000548860 PARD6BQ9BYG5 372 aa15.97■□□□□ 0.15
CACNB3-209ENST00000548860 SLC39A2Q9NP94 309 aa15.97■□□□□ 0.15
CACNB3-209ENST00000548860 TRIM10Q9UDY6 481 aa15.97■□□□□ 0.15
CACNB3-209ENST00000548860 PSMA7O14818 248 aa15.97■□□□□ 0.15
CACNB3-209ENST00000548860 NELFCDQ8IXH7 590 aa15.97■□□□□ 0.15
CACNB3-209ENST00000548860 PLCD3Q8N3E9 789 aa15.97■□□□□ 0.15
CACNB3-209ENST00000548860 PNMA1Q8ND90 353 aa15.97■□□□□ 0.15
CACNB3-209ENST00000548860 KANSL2Q9H9L4 492 aa15.97■□□□□ 0.15
CACNB3-209ENST00000548860 CXCR5P32302 372 aa15.96■□□□□ 0.15
CACNB3-209ENST00000548860 NCAPHQ15003 741 aa15.96■□□□□ 0.15
CACNB3-209ENST00000548860 CCDC40Q4G0X9 1142 aa15.96■□□□□ 0.15
CACNB3-209ENST00000548860 RASGRP2Q7LDG7 609 aa15.96■□□□□ 0.15
CACNB3-209ENST00000548860 RPGRQ92834 1020 aaKnown RBP15.96■□□□□ 0.15
CACNB3-209ENST00000548860 NBPF3Q9H094 633 aa15.96■□□□□ 0.15
CACNB3-209ENST00000548860 PNMA6AP0CW24 399 aaPredicted RBP15.96■□□□□ 0.15
CACNB3-209ENST00000548860 PTPREP23469 700 aa15.96■□□□□ 0.15
CACNB3-209ENST00000548860 TOB1P50616 345 aaPredicted RBP15.96■□□□□ 0.15
CACNB3-209ENST00000548860 MORC3Q14149 939 aa15.96■□□□□ 0.15
CACNB3-209ENST00000548860 LRRC41Q15345 812 aa15.96■□□□□ 0.15
CACNB3-209ENST00000548860 TTC19Q6DKK2 380 aaPredicted RBP15.96■□□□□ 0.15
CACNB3-209ENST00000548860 LRP10Q7Z4F1 713 aa15.96■□□□□ 0.15
CACNB3-209ENST00000548860 ANKRD7Q92527 254 aa15.96■□□□□ 0.15
CACNB3-209ENST00000548860 KCNJ18B7U540 433 aa15.96■□□□□ 0.14
CACNB3-209ENST00000548860 KCNJ12Q14500 433 aa15.96■□□□□ 0.14
CACNB3-209ENST00000548860 LRRC47Q8N1G4 583 aaKnown RBP15.96■□□□□ 0.14
CACNB3-209ENST00000548860 MRPL44Q9H9J2 332 aaKnown RBP15.96■□□□□ 0.14
CACNB3-209ENST00000548860 RTL9Q8NET4 1388 aa15.95■□□□□ 0.14
CACNB3-209ENST00000548860 PSDA5PKW4 1024 aaPredicted RBP15.95■□□□□ 0.14
CACNB3-209ENST00000548860 USP17L2Q6R6M4 530 aa15.95■□□□□ 0.14
CACNB3-209ENST00000548860 RBM43Q6ZSC3 357 aaKnown RBP15.95■□□□□ 0.14
CACNB3-209ENST00000548860 PDE11AQ9HCR9 933 aa15.95■□□□□ 0.14
CACNB3-209ENST00000548860 HDAC6Q9UBN7 1215 aa15.95■□□□□ 0.14
CACNB3-209ENST00000548860 B4DLN1 442 aa15.95■□□□□ 0.14
CACNB3-209ENST00000548860 IKBKBO14920 756 aa15.95■□□□□ 0.14
CACNB3-209ENST00000548860 EIF3JO75822 258 aaKnown RBP15.95■□□□□ 0.14
CACNB3-209ENST00000548860 PLCD1P51178 756 aa15.95■□□□□ 0.14
CACNB3-209ENST00000548860 STAG2Q8N3U4 1231 aa15.95■□□□□ 0.14
CACNB3-209ENST00000548860 OSBPL5Q9H0X9 879 aaPredicted RBP15.95■□□□□ 0.14
CACNB3-209ENST00000548860 FOXP2O15409 715 aa15.95■□□□□ 0.14
CACNB3-209ENST00000548860 MECOMQ03112 1051 aa15.95■□□□□ 0.14
CACNB3-209ENST00000548860 GSPT2Q8IYD1 628 aaKnown RBP15.95■□□□□ 0.14
CACNB3-209ENST00000548860 CCDC42Q96M95 316 aa15.95■□□□□ 0.14
CACNB3-209ENST00000548860 TYW1BQ6NUM6 668 aa15.94■□□□□ 0.14
CACNB3-209ENST00000548860 CLEC10AQ8IUN9 316 aa15.94■□□□□ 0.14
CACNB3-209ENST00000548860 ZNF622Q969S3 477 aaKnown RBP eCLIP15.94■□□□□ 0.14
CACNB3-209ENST00000548860 TIGD1Q96MW7 591 aa15.94■□□□□ 0.14
CACNB3-209ENST00000548860 NOC4LQ9BVI4 516 aaKnown RBP15.94■□□□□ 0.14
CACNB3-209ENST00000548860 GOLGA6L9A6NEM1 432 aa15.94■□□□□ 0.14
CACNB3-209ENST00000548860 SCG2P13521 617 aa15.94■□□□□ 0.14
CACNB3-209ENST00000548860 TCP10Q12799 353 aa15.94■□□□□ 0.14
CACNB3-209ENST00000548860 SPATA1Q5VX52 437 aa15.94■□□□□ 0.14
CACNB3-209ENST00000548860 SLC4A9Q96Q91 983 aa15.94■□□□□ 0.14
CACNB3-209ENST00000548860 NOP2P46087 812 aaKnown RBP15.94■□□□□ 0.14
CACNB3-209ENST00000548860 CTAGE1Q96RT6 745 aa15.94■□□□□ 0.14
CACNB3-209ENST00000548860 BCCIPQ9P287 314 aaKnown RBP eCLIP15.94■□□□□ 0.14
CACNB3-209ENST00000548860 CTIFO43310 598 aaKnown RBP15.93■□□□□ 0.14
CACNB3-209ENST00000548860 LIFRP42702 1097 aa15.93■□□□□ 0.14
CACNB3-209ENST00000548860 PTPAQ15257 358 aa15.93■□□□□ 0.14
CACNB3-209ENST00000548860 NYAP1Q6ZVC0 841 aa15.93■□□□□ 0.14
CACNB3-209ENST00000548860 TEX11Q8IYF3 940 aa15.93■□□□□ 0.14
CACNB3-209ENST00000548860 FBXO2Q9UK22 296 aaPredicted RBP15.93■□□□□ 0.14
CACNB3-209ENST00000548860 CTR9Q6PD62 1173 aa15.93■□□□□ 0.14
CACNB3-209ENST00000548860 TPTE2Q6XPS3 522 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms