RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 TMX2Q9Y320 296 aa18.78■□□□□ 0.6
DDX54-205ENST00000548786 HSPD1P10809 573 aaKnown RBP18.77■□□□□ 0.6
DDX54-205ENST00000548786 PDE4BQ07343 736 aa18.77■□□□□ 0.6
DDX54-205ENST00000548786 SKAP1Q86WV1 359 aa18.77■□□□□ 0.6
DDX54-205ENST00000548786 GPRC5AQ8NFJ5 357 aa18.77■□□□□ 0.6
DDX54-205ENST00000548786 VCPKMTQ9H867 229 aa18.77■□□□□ 0.6
DDX54-205ENST00000548786 ZNF287Q9HBT7 754 aa18.77■□□□□ 0.6
DDX54-205ENST00000548786 MORF4L1Q9UBU8 362 aa18.77■□□□□ 0.6
DDX54-205ENST00000548786 GREB1LQ9C091 1923 aaPredicted RBP18.76■□□□□ 0.59
DDX54-205ENST00000548786 FGAP02671 866 aa18.76■□□□□ 0.59
DDX54-205ENST00000548786 TSPY3P0CV98 308 aa18.76■□□□□ 0.59
DDX54-205ENST00000548786 TSPY8P0CW00 308 aa18.76■□□□□ 0.59
DDX54-205ENST00000548786 FLT3LGP49771 235 aa18.76■□□□□ 0.59
DDX54-205ENST00000548786 HAND2P61296 217 aa18.76■□□□□ 0.59
DDX54-205ENST00000548786 ERVK-9P63128 1117 aa18.76■□□□□ 0.59
DDX54-205ENST00000548786 ERVK-24P63145 666 aa18.76■□□□□ 0.59
DDX54-205ENST00000548786 Q3C1V9 767 aa18.76■□□□□ 0.59
DDX54-205ENST00000548786 CCAR1Q8IX12 1150 aaKnown RBP18.76■□□□□ 0.59
DDX54-205ENST00000548786 COA7Q96BR5 231 aa18.76■□□□□ 0.59
DDX54-205ENST00000548786 ARMC5Q96C12 935 aa18.76■□□□□ 0.59
DDX54-205ENST00000548786 CHMP4CQ96CF2 233 aa18.76■□□□□ 0.59
DDX54-205ENST00000548786 TOMM22Q9NS69 142 aa18.76■□□□□ 0.59
DDX54-205ENST00000548786 BIN2Q9UBW5 565 aaPredicted RBP18.76■□□□□ 0.59
DDX54-205ENST00000548786 TACC3Q9Y6A5 838 aa18.76■□□□□ 0.59
DDX54-205ENST00000548786 SPDYE16A6NNV3 312 aaPredicted RBP18.75■□□□□ 0.59
DDX54-205ENST00000548786 CNMDO75829 334 aa18.75■□□□□ 0.59
DDX54-205ENST00000548786 ELNP15502 786 aa18.75■□□□□ 0.59
DDX54-205ENST00000548786 PRMT2P55345 433 aa18.75■□□□□ 0.59
DDX54-205ENST00000548786 TFAP4Q01664 338 aa18.75■□□□□ 0.59
DDX54-205ENST00000548786 WDR78Q5VTH9 848 aa18.75■□□□□ 0.59
DDX54-205ENST00000548786 NBPF11Q86T75 865 aa18.75■□□□□ 0.59
DDX54-205ENST00000548786 LRRC47Q8N1G4 583 aaKnown RBP18.75■□□□□ 0.59
DDX54-205ENST00000548786 CEP95Q96GE4 821 aa18.75■□□□□ 0.59
DDX54-205ENST00000548786 ZNF333Q96JL9 665 aa18.75■□□□□ 0.59
DDX54-205ENST00000548786 NUP88Q99567 741 aaPredicted RBP18.75■□□□□ 0.59
DDX54-205ENST00000548786 PORCNQ9H237 461 aa18.75■□□□□ 0.59
DDX54-205ENST00000548786 GOPCQ9HD26 462 aa18.75■□□□□ 0.59
DDX54-205ENST00000548786 CLIP2Q9UDT6 1046 aa18.75■□□□□ 0.59
DDX54-205ENST00000548786 POTEFA5A3E0 1075 aa18.74■□□□□ 0.59
DDX54-205ENST00000548786 FLOT1O75955 427 aa18.74■□□□□ 0.59
DDX54-205ENST00000548786 GRK4P32298 578 aa18.74■□□□□ 0.59
DDX54-205ENST00000548786 RRP12Q5JTH9 1297 aaKnown RBP18.74■□□□□ 0.59
DDX54-205ENST00000548786 FAM83BQ5T0W9 1011 aa18.74■□□□□ 0.59
DDX54-205ENST00000548786 LPAR1Q92633 364 aa18.74■□□□□ 0.59
DDX54-205ENST00000548786 CWC22Q9HCG8 908 aaKnown RBP18.74■□□□□ 0.59
DDX54-205ENST00000548786 BTBD7Q9P203 1132 aa18.74■□□□□ 0.59
DDX54-205ENST00000548786 DOCK3Q8IZD9 2030 aa18.73■□□□□ 0.59
DDX54-205ENST00000548786 IGKV6D-41A0A0C4DH26 115 aa18.73■□□□□ 0.59
DDX54-205ENST00000548786 HIP1O00291 1037 aa18.73■□□□□ 0.59
DDX54-205ENST00000548786 ADCY3O60266 1144 aa18.73■□□□□ 0.59
DDX54-205ENST00000548786 RANBP6O60518 1105 aaKnown RBP18.73■□□□□ 0.59
DDX54-205ENST00000548786 NMT2O60551 498 aa18.73■□□□□ 0.59
DDX54-205ENST00000548786 MFAP1P55081 439 aaKnown RBP18.73■□□□□ 0.59
DDX54-205ENST00000548786 COG2Q14746 738 aa18.73■□□□□ 0.59
DDX54-205ENST00000548786 ALX1Q15699 326 aa18.73■□□□□ 0.59
DDX54-205ENST00000548786 TICAM2Q86XR7 235 aa18.73■□□□□ 0.59
DDX54-205ENST00000548786 GTF3C2Q8WUA4 911 aaPredicted RBP18.73■□□□□ 0.59
DDX54-205ENST00000548786 IL25Q9H293 177 aa18.73■□□□□ 0.59
DDX54-205ENST00000548786 FBXO28Q9NVF7 368 aa18.73■□□□□ 0.59
DDX54-205ENST00000548786 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.73■□□□□ 0.59
DDX54-205ENST00000548786 RABGAP1Q9Y3P9 1069 aa18.73■□□□□ 0.59
DDX54-205ENST00000548786 MYH4Q9Y623 1939 aa18.72■□□□□ 0.59
DDX54-205ENST00000548786 TSPY2A6NKD2 308 aa18.72■□□□□ 0.59
DDX54-205ENST00000548786 WDR46O15213 610 aaKnown RBP18.72■□□□□ 0.59
DDX54-205ENST00000548786 MTFR1Q15390 333 aa18.72■□□□□ 0.59
DDX54-205ENST00000548786 ATG4CQ96DT6 458 aa18.72■□□□□ 0.59
DDX54-205ENST00000548786 MTMR4Q9NYA4 1195 aa18.72■□□□□ 0.59
DDX54-205ENST00000548786 NYAP2Q9P242 653 aa18.72■□□□□ 0.59
DDX54-205ENST00000548786 ISY1Q9ULR0 285 aaKnown RBP18.72■□□□□ 0.59
DDX54-205ENST00000548786 MLLT1Q03111 559 aaPredicted RBP18.71■□□□□ 0.59
DDX54-205ENST00000548786 PLS1Q14651 629 aa18.71■□□□□ 0.59
DDX54-205ENST00000548786 NEDD1Q8NHV4 660 aa18.71■□□□□ 0.59
DDX54-205ENST00000548786 ANAPC4Q9UJX5 808 aa18.71■□□□□ 0.59
DDX54-205ENST00000548786 BRCA2P51587 3418 aa18.71■□□□□ 0.59
DDX54-205ENST00000548786 RLFQ13129 1914 aa18.7■□□□□ 0.58
DDX54-205ENST00000548786 PLIN4Q96Q06 1357 aa18.7■□□□□ 0.58
DDX54-205ENST00000548786 F5H6K3 240 aa18.7■□□□□ 0.58
DDX54-205ENST00000548786 TTLL1O95922 423 aa18.7■□□□□ 0.58
DDX54-205ENST00000548786 NDUFB10O96000 172 aa18.7■□□□□ 0.58
DDX54-205ENST00000548786 CYP2B6P20813 491 aa18.7■□□□□ 0.58
DDX54-205ENST00000548786 MAPK4P31152 587 aa18.7■□□□□ 0.58
DDX54-205ENST00000548786 KLRC3Q07444 240 aa18.7■□□□□ 0.58
DDX54-205ENST00000548786 CENPQQ7L2Z9 268 aaPredicted RBP18.7■□□□□ 0.58
DDX54-205ENST00000548786 GPR142Q7Z601 462 aa18.7■□□□□ 0.58
DDX54-205ENST00000548786 TBC1D10CQ8IV04 446 aa18.7■□□□□ 0.58
DDX54-205ENST00000548786 SLAIN1Q8ND83 568 aa18.7■□□□□ 0.58
DDX54-205ENST00000548786 TMEM106CQ9BVX2 250 aa18.7■□□□□ 0.58
DDX54-205ENST00000548786 NBPF3Q9H094 633 aa18.7■□□□□ 0.58
DDX54-205ENST00000548786 HOXC10Q9NYD6 342 aa18.7■□□□□ 0.58
DDX54-205ENST00000548786 STX8Q9UNK0 236 aa18.7■□□□□ 0.58
DDX54-205ENST00000548786 MTMR7Q9Y216 660 aa18.7■□□□□ 0.58
DDX54-205ENST00000548786 TNRC18O15417 2968 aaPredicted RBP18.7■□□□□ 0.58
DDX54-205ENST00000548786 INHAP05111 366 aa18.69■□□□□ 0.58
DDX54-205ENST00000548786 EN2P19622 333 aaPredicted RBP18.69■□□□□ 0.58
DDX54-205ENST00000548786 DSG3P32926 999 aa18.69■□□□□ 0.58
DDX54-205ENST00000548786 RGS19P49795 217 aa18.69■□□□□ 0.58
DDX54-205ENST00000548786 CCNA1P78396 465 aa18.69■□□□□ 0.58
DDX54-205ENST00000548786 LBX2Q6XYB7 198 aa18.69■□□□□ 0.58
DDX54-205ENST00000548786 PLEKHH3Q7Z736 793 aa18.69■□□□□ 0.58
DDX54-205ENST00000548786 GJD2Q9UKL4 321 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms