RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 XBP1P17861 261 aa26.08■■□□□ 1.77
NPAS3-206ENST00000548645 PACS2Q86VP3 889 aa26.08■■□□□ 1.77
NPAS3-206ENST00000548645 TOMM22Q9NS69 142 aa26.08■■□□□ 1.77
NPAS3-206ENST00000548645 PRPF6O94906 941 aaKnown RBP26.08■■□□□ 1.76
NPAS3-206ENST00000548645 CDC25AP30304 524 aa26.08■■□□□ 1.76
NPAS3-206ENST00000548645 RRP12Q5JTH9 1297 aaKnown RBP26.08■■□□□ 1.76
NPAS3-206ENST00000548645 CMTR1Q8N1G2 835 aaKnown RBP26.08■■□□□ 1.76
NPAS3-206ENST00000548645 HAUS4Q9H6D7 363 aa26.08■■□□□ 1.76
NPAS3-206ENST00000548645 HPCAL4Q9UM19 191 aa26.08■■□□□ 1.76
NPAS3-206ENST00000548645 RNF225M0QZC1 329 aaPredicted RBP26.07■■□□□ 1.76
NPAS3-206ENST00000548645 NDUFA10O95299 355 aa26.07■■□□□ 1.76
NPAS3-206ENST00000548645 FANCBQ8NB91 859 aa26.07■■□□□ 1.76
NPAS3-206ENST00000548645 RPGRIP1Q96KN7 1286 aa26.07■■□□□ 1.76
NPAS3-206ENST00000548645 MTA3Q9BTC8 594 aa26.07■■□□□ 1.76
NPAS3-206ENST00000548645 CNNM1Q9NRU3 951 aa26.07■■□□□ 1.76
NPAS3-206ENST00000548645 RWDD2AQ9UIY3 292 aa26.07■■□□□ 1.76
NPAS3-206ENST00000548645 KDM4FA0A1W2PPD8 638 aa26.07■■□□□ 1.76
NPAS3-206ENST00000548645 UQCRFS1P1P0C7P4 283 aa26.07■■□□□ 1.76
NPAS3-206ENST00000548645 GTF2A1P52655 376 aaPredicted RBP26.07■■□□□ 1.76
NPAS3-206ENST00000548645 ZBTB38Q8NAP3 1195 aaPredicted RBP26.07■■□□□ 1.76
NPAS3-206ENST00000548645 ZKSCAN3Q9BRR0 538 aa26.07■■□□□ 1.76
NPAS3-206ENST00000548645 TACC3Q9Y6A5 838 aa26.07■■□□□ 1.76
NPAS3-206ENST00000548645 TARSL2A2RTX5 802 aaKnown RBP26.06■■□□□ 1.76
NPAS3-206ENST00000548645 DNAJC21Q5F1R6 531 aaKnown RBP26.06■■□□□ 1.76
NPAS3-206ENST00000548645 BCL9LQ86UU0 1499 aa26.06■■□□□ 1.76
NPAS3-206ENST00000548645 RRAGBQ5VZM2 374 aa26.06■■□□□ 1.76
NPAS3-206ENST00000548645 NUP133Q8WUM0 1156 aa26.06■■□□□ 1.76
NPAS3-206ENST00000548645 TAB2Q9NYJ8 693 aa26.06■■□□□ 1.76
NPAS3-206ENST00000548645 MBD4O95243 580 aa26.05■■□□□ 1.76
NPAS3-206ENST00000548645 ARID4AP29374 1257 aaPredicted RBP26.05■■□□□ 1.76
NPAS3-206ENST00000548645 EFCAB13Q8IY85 973 aa26.05■■□□□ 1.76
NPAS3-206ENST00000548645 TTLL11Q8NHH1 800 aa26.05■■□□□ 1.76
NPAS3-206ENST00000548645 COG1Q8WTW3 980 aa26.05■■□□□ 1.76
NPAS3-206ENST00000548645 SAR1BQ9Y6B6 198 aa26.05■■□□□ 1.76
NPAS3-206ENST00000548645 STIM1Q13586 685 aa26.05■■□□□ 1.76
NPAS3-206ENST00000548645 TCP11X2Q5H9J9 407 aa26.05■■□□□ 1.76
NPAS3-206ENST00000548645 STAG1Q8WVM7 1258 aa26.05■■□□□ 1.76
NPAS3-206ENST00000548645 SMARCC1Q92922 1105 aaPredicted RBP26.05■■□□□ 1.76
NPAS3-206ENST00000548645 RNF26Q9BY78 433 aaPredicted RBP26.05■■□□□ 1.76
NPAS3-206ENST00000548645 JRKLQ9Y4A0 524 aa26.05■■□□□ 1.76
NPAS3-206ENST00000548645 ITGA6P23229 1130 aa26.04■■□□□ 1.76
NPAS3-206ENST00000548645 PAK1Q13153 545 aa26.04■■□□□ 1.76
NPAS3-206ENST00000548645 ZNF654Q8IZM8 581 aa26.04■■□□□ 1.76
NPAS3-206ENST00000548645 CHP1Q99653 195 aa26.04■■□□□ 1.76
NPAS3-206ENST00000548645 KCNJ18B7U540 433 aa26.04■■□□□ 1.76
NPAS3-206ENST00000548645 KRT2P35908 639 aa26.04■■□□□ 1.76
NPAS3-206ENST00000548645 PHKA1P46020 1223 aa26.04■■□□□ 1.76
NPAS3-206ENST00000548645 CKAP4Q07065 602 aaKnown RBP26.04■■□□□ 1.76
NPAS3-206ENST00000548645 KCNJ12Q14500 433 aa26.04■■□□□ 1.76
NPAS3-206ENST00000548645 FAM107BQ9H098 131 aa26.04■■□□□ 1.76
NPAS3-206ENST00000548645 BRMS1Q9HCU9 246 aa26.04■■□□□ 1.76
NPAS3-206ENST00000548645 REXO2Q9Y3B8 237 aaKnown RBP26.04■■□□□ 1.76
NPAS3-206ENST00000548645 ZNF142P52746 1687 aaPredicted RBP26.04■■□□□ 1.76
NPAS3-206ENST00000548645 FAM205CA6NFA0 338 aa26.04■■□□□ 1.76
NPAS3-206ENST00000548645 IRX3P78415 501 aaPredicted RBP26.04■■□□□ 1.76
NPAS3-206ENST00000548645 RNF216Q9NWF9 866 aaPredicted RBP26.04■■□□□ 1.76
NPAS3-206ENST00000548645 OR8K1Q8NGG5 319 aa26.03■■□□□ 1.76
NPAS3-206ENST00000548645 MMS19Q96T76 1030 aa26.03■■□□□ 1.76
NPAS3-206ENST00000548645 CHD4Q14839 1912 aa26.03■■□□□ 1.76
NPAS3-206ENST00000548645 ANKRD18BA2A2Z9 1011 aa26.03■■□□□ 1.76
NPAS3-206ENST00000548645 ERVV-2B6SEH9 535 aa26.03■■□□□ 1.76
NPAS3-206ENST00000548645 COBLO75128 1261 aa26.03■■□□□ 1.76
NPAS3-206ENST00000548645 VGLL2Q8N8G2 317 aa26.03■■□□□ 1.76
NPAS3-206ENST00000548645 CRACR2AQ9BSW2 395 aa26.03■■□□□ 1.76
NPAS3-206ENST00000548645 NACAP1Q9BZK3 213 aa26.03■■□□□ 1.76
NPAS3-206ENST00000548645 YY1AP1Q9H869 796 aa26.03■■□□□ 1.76
NPAS3-206ENST00000548645 TRIM10Q9UDY6 481 aa26.03■■□□□ 1.76
NPAS3-206ENST00000548645 ENC1O14682 589 aa26.02■■□□□ 1.76
NPAS3-206ENST00000548645 UBXN1Q04323 297 aa26.02■■□□□ 1.76
NPAS3-206ENST00000548645 MAP3K12Q12852 859 aa26.02■■□□□ 1.76
NPAS3-206ENST00000548645 PAPD7Q5XG87 772 aaKnown RBP26.02■■□□□ 1.76
NPAS3-206ENST00000548645 ARMT1Q9H993 441 aa26.02■■□□□ 1.76
NPAS3-206ENST00000548645 GSG1L2A8MUP6 293 aa26.02■■□□□ 1.76
NPAS3-206ENST00000548645 PDE8BO95263 885 aa26.02■■□□□ 1.76
NPAS3-206ENST00000548645 PPP2R5BQ15173 497 aa26.02■■□□□ 1.76
NPAS3-206ENST00000548645 MAGEB6Q8N7X4 407 aa26.02■■□□□ 1.76
NPAS3-206ENST00000548645 EHBP1Q8NDI1 1231 aa26.02■■□□□ 1.76
NPAS3-206ENST00000548645 HDAC6Q9UBN7 1215 aa26.02■■□□□ 1.76
NPAS3-206ENST00000548645 ZNF330Q9Y3S2 320 aaPredicted RBP26.02■■□□□ 1.76
NPAS3-206ENST00000548645 TIAM2Q8IVF5 1701 aa26.02■■□□□ 1.76
NPAS3-206ENST00000548645 TDO2P48775 406 aa26.01■■□□□ 1.76
NPAS3-206ENST00000548645 TSR1Q2NL82 804 aaKnown RBP26.01■■□□□ 1.76
NPAS3-206ENST00000548645 STAMQ92783 540 aa26.01■■□□□ 1.76
NPAS3-206ENST00000548645 PYM1Q9BRP8 204 aaKnown RBP26.01■■□□□ 1.76
NPAS3-206ENST00000548645 PLEKHA4Q9H4M7 779 aa26.01■■□□□ 1.76
NPAS3-206ENST00000548645 GREM2Q9H772 168 aa26.01■■□□□ 1.76
NPAS3-206ENST00000548645 XDHP47989 1333 aa26.01■■□□□ 1.75
NPAS3-206ENST00000548645 KCPQ6ZWJ8 1503 aa26.01■■□□□ 1.75
NPAS3-206ENST00000548645 NELFBQ8WX92 580 aa26.01■■□□□ 1.75
NPAS3-206ENST00000548645 CDHR2Q9BYE9 1310 aa26.01■■□□□ 1.75
NPAS3-206ENST00000548645 VPS54Q9P1Q0 977 aa26.01■■□□□ 1.75
NPAS3-206ENST00000548645 ZC3H4Q9UPT8 1303 aaKnown RBP26.01■■□□□ 1.75
NPAS3-206ENST00000548645 COL18A1P39060 1754 aa26.01■■□□□ 1.75
NPAS3-206ENST00000548645 UBR2Q8IWV8 1755 aa26.01■■□□□ 1.75
NPAS3-206ENST00000548645 ALS2Q96Q42 1657 aa26.01■■□□□ 1.75
NPAS3-206ENST00000548645 CPP00450 1065 aa26.01■■□□□ 1.75
NPAS3-206ENST00000548645 ATP1A1P05023 1023 aaKnown RBP26.01■■□□□ 1.75
NPAS3-206ENST00000548645 EIF5P55010 431 aaKnown RBP26.01■■□□□ 1.75
NPAS3-206ENST00000548645 CCDC122Q5T0U0 273 aa26.01■■□□□ 1.75
NPAS3-206ENST00000548645 CHRNA2Q15822 529 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms