RNA–Protein interactions for RNA: ENST00000548390.5

LETMD1-215, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 549 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-215ENST00000548390 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.26■□□□□ 0.83
LETMD1-215ENST00000548390 SMARCC2Q8TAQ2 1214 aa20.26■□□□□ 0.83
LETMD1-215ENST00000548390 AS3MTQ9HBK9 375 aa20.26■□□□□ 0.83
LETMD1-215ENST00000548390 NCOA5Q9HCD5 579 aaKnown RBP20.26■□□□□ 0.83
LETMD1-215ENST00000548390 CIZ1Q9ULV3 898 aaPredicted RBP20.26■□□□□ 0.83
LETMD1-215ENST00000548390 USP17L5A8MUK1 530 aa20.25■□□□□ 0.83
LETMD1-215ENST00000548390 SNHG28P0DPA3 235 aa20.25■□□□□ 0.83
LETMD1-215ENST00000548390 IFNAR1P17181 557 aa20.25■□□□□ 0.83
LETMD1-215ENST00000548390 RXRAP19793 462 aa20.25■□□□□ 0.83
LETMD1-215ENST00000548390 ASPRV1Q53RT3 343 aa20.25■□□□□ 0.83
LETMD1-215ENST00000548390 ARMC9Q7Z3E5 817 aa20.25■□□□□ 0.83
LETMD1-215ENST00000548390 SIAH1Q8IUQ4 282 aa20.25■□□□□ 0.83
LETMD1-215ENST00000548390 LRRC47Q8N1G4 583 aaKnown RBP20.25■□□□□ 0.83
LETMD1-215ENST00000548390 SPRYD3Q8NCJ5 442 aa20.25■□□□□ 0.83
LETMD1-215ENST00000548390 NSUN7Q8NE18 718 aaKnown RBP20.25■□□□□ 0.83
LETMD1-215ENST00000548390 ZNF526Q8TF50 670 aaPredicted RBP20.25■□□□□ 0.83
LETMD1-215ENST00000548390 FAM217BQ9NTX9 383 aaPredicted RBP20.25■□□□□ 0.83
LETMD1-215ENST00000548390 TMX2Q9Y320 296 aa20.25■□□□□ 0.83
LETMD1-215ENST00000548390 PARP1P09874 1014 aaKnown RBP20.24■□□□□ 0.83
LETMD1-215ENST00000548390 POTEIP0CG38 1075 aa20.24■□□□□ 0.83
LETMD1-215ENST00000548390 POTEJP0CG39 1038 aa20.24■□□□□ 0.83
LETMD1-215ENST00000548390 PDCP20941 246 aa20.24■□□□□ 0.83
LETMD1-215ENST00000548390 SMARCA1P28370 1054 aa20.24■□□□□ 0.83
LETMD1-215ENST00000548390 CDC27P30260 824 aa20.24■□□□□ 0.83
LETMD1-215ENST00000548390 INPP5BP32019 993 aa20.24■□□□□ 0.83
LETMD1-215ENST00000548390 ADD1P35611 737 aaKnown RBP20.24■□□□□ 0.83
LETMD1-215ENST00000548390 FKBP1BP68106 108 aa20.24■□□□□ 0.83
LETMD1-215ENST00000548390 SHROOM1Q2M3G4 852 aaPredicted RBP20.24■□□□□ 0.83
LETMD1-215ENST00000548390 GPATCH4Q5T3I0 446 aaKnown RBP20.24■□□□□ 0.83
LETMD1-215ENST00000548390 MAP1SQ66K74 1059 aaPredicted RBP20.24■□□□□ 0.83
LETMD1-215ENST00000548390 RAB11FIP4Q86YS3 637 aa20.24■□□□□ 0.83
LETMD1-215ENST00000548390 CLEC10AQ8IUN9 316 aa20.24■□□□□ 0.83
LETMD1-215ENST00000548390 CCDC144CPQ8IYA2 1237 aa20.24■□□□□ 0.83
LETMD1-215ENST00000548390 DCAF4Q8WV16 495 aa20.24■□□□□ 0.83
LETMD1-215ENST00000548390 GOPCQ9HD26 462 aa20.24■□□□□ 0.83
LETMD1-215ENST00000548390 FOXD4L1Q9NU39 408 aa20.24■□□□□ 0.83
LETMD1-215ENST00000548390 RBM27Q9P2N5 1060 aaKnown RBP20.24■□□□□ 0.83
LETMD1-215ENST00000548390 CSADQ9Y600 493 aa20.24■□□□□ 0.83
LETMD1-215ENST00000548390 STK36Q9NRP7 1315 aa20.24■□□□□ 0.83
LETMD1-215ENST00000548390 PTPDC1A2A3K4 754 aa20.23■□□□□ 0.83
LETMD1-215ENST00000548390 PALM3A6NDB9 673 aaPredicted RBP20.23■□□□□ 0.83
LETMD1-215ENST00000548390 CTDNEP1O95476 244 aa20.23■□□□□ 0.83
LETMD1-215ENST00000548390 PDHBP11177 359 aa20.23■□□□□ 0.83
LETMD1-215ENST00000548390 NTRK3Q16288 839 aa20.23■□□□□ 0.83
LETMD1-215ENST00000548390 CHADLQ6NUI6 762 aa20.23■□□□□ 0.83
LETMD1-215ENST00000548390 TMTC3Q6ZXV5 915 aa20.23■□□□□ 0.83
LETMD1-215ENST00000548390 TRIM22Q8IYM9 498 aa20.23■□□□□ 0.83
LETMD1-215ENST00000548390 GMCL1Q96IK5 515 aa20.23■□□□□ 0.83
LETMD1-215ENST00000548390 WDR18Q9BV38 432 aa20.23■□□□□ 0.83
LETMD1-215ENST00000548390 GPBP1L1Q9HC44 474 aaPredicted RBP20.23■□□□□ 0.83
LETMD1-215ENST00000548390 GJB2P29033 226 aa20.22■□□□□ 0.83
LETMD1-215ENST00000548390 DDIT3P35638 169 aa20.22■□□□□ 0.83
LETMD1-215ENST00000548390 SLFN13Q68D06 897 aa20.22■□□□□ 0.83
LETMD1-215ENST00000548390 ANKRD13AQ8IZ07 590 aa20.22■□□□□ 0.83
LETMD1-215ENST00000548390 FAM184AQ8NB25 1140 aa20.22■□□□□ 0.83
LETMD1-215ENST00000548390 RGS22Q8NE09 1264 aa20.22■□□□□ 0.83
LETMD1-215ENST00000548390 WASF1Q92558 559 aa20.22■□□□□ 0.83
LETMD1-215ENST00000548390 F5H6K3 240 aa20.21■□□□□ 0.83
LETMD1-215ENST00000548390 FMNL1O95466 1100 aaPredicted RBP20.21■□□□□ 0.83
LETMD1-215ENST00000548390 PTPRAP18433 802 aa20.21■□□□□ 0.83
LETMD1-215ENST00000548390 USP14P54578 494 aa20.21■□□□□ 0.83
LETMD1-215ENST00000548390 AKAP17AQ02040 695 aaKnown RBP20.21■□□□□ 0.83
LETMD1-215ENST00000548390 KLRC3Q07444 240 aa20.21■□□□□ 0.83
LETMD1-215ENST00000548390 SSRP1Q08945 709 aaKnown RBP20.21■□□□□ 0.83
LETMD1-215ENST00000548390 TTLL12Q14166 644 aaPredicted RBP20.21■□□□□ 0.83
LETMD1-215ENST00000548390 ZKSCAN4Q969J2 545 aaPredicted RBP20.21■□□□□ 0.83
LETMD1-215ENST00000548390 RNF26Q9BY78 433 aaPredicted RBP20.21■□□□□ 0.83
LETMD1-215ENST00000548390 KIAA1683Q9H0B3 1180 aa20.21■□□□□ 0.83
LETMD1-215ENST00000548390 CHMP5Q9NZZ3 219 aa20.21■□□□□ 0.83
LETMD1-215ENST00000548390 MAD2L2Q9UI95 211 aa20.21■□□□□ 0.83
LETMD1-215ENST00000548390 A0A1W2PRG0 241 aa20.2■□□□□ 0.82
LETMD1-215ENST00000548390 JAK2O60674 1132 aa20.2■□□□□ 0.82
LETMD1-215ENST00000548390 SLC1A4P43007 532 aa20.2■□□□□ 0.82
LETMD1-215ENST00000548390 NUCB2P80303 420 aa20.2■□□□□ 0.82
LETMD1-215ENST00000548390 ZNF543Q08ER8 600 aa20.2■□□□□ 0.82
LETMD1-215ENST00000548390 LPAR1Q92633 364 aa20.2■□□□□ 0.82
LETMD1-215ENST00000548390 FEZ1Q99689 392 aa20.2■□□□□ 0.82
LETMD1-215ENST00000548390 VCPKMTQ9H867 229 aa20.2■□□□□ 0.82
LETMD1-215ENST00000548390 ORC3Q9UBD5 711 aaPredicted RBP20.2■□□□□ 0.82
LETMD1-215ENST00000548390 POLR2AP24928 1970 aaKnown RBP20.2■□□□□ 0.82
LETMD1-215ENST00000548390 KLRF2D3W0D1 207 aa20.19■□□□□ 0.82
LETMD1-215ENST00000548390 NDUFB10O96000 172 aa20.19■□□□□ 0.82
LETMD1-215ENST00000548390 FUT2Q10981 343 aa20.19■□□□□ 0.82
LETMD1-215ENST00000548390 PRKG1Q13976 671 aa20.19■□□□□ 0.82
LETMD1-215ENST00000548390 VGLL4Q14135 290 aa20.19■□□□□ 0.82
LETMD1-215ENST00000548390 USP17L2Q6R6M4 530 aa20.19■□□□□ 0.82
LETMD1-215ENST00000548390 DLK2Q6UY11 383 aa20.19■□□□□ 0.82
LETMD1-215ENST00000548390 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.19■□□□□ 0.82
LETMD1-215ENST00000548390 ZNF280CQ8ND82 737 aa20.19■□□□□ 0.82
LETMD1-215ENST00000548390 ACER1Q8TDN7 264 aa20.19■□□□□ 0.82
LETMD1-215ENST00000548390 SPZ1Q9BXG8 430 aa20.19■□□□□ 0.82
LETMD1-215ENST00000548390 C19orf81C9J6K1 198 aa20.18■□□□□ 0.82
LETMD1-215ENST00000548390 USP17L10C9JJH3 530 aa20.18■□□□□ 0.82
LETMD1-215ENST00000548390 PRPF3O43395 683 aaKnown RBP20.18■□□□□ 0.82
LETMD1-215ENST00000548390 PLEKHA8P1O95397 391 aa20.18■□□□□ 0.82
LETMD1-215ENST00000548390 DEXIO95424 95 aa20.18■□□□□ 0.82
LETMD1-215ENST00000548390 CCDC96Q2M329 555 aa20.18■□□□□ 0.82
LETMD1-215ENST00000548390 NBPF11Q86T75 865 aa20.18■□□□□ 0.82
LETMD1-215ENST00000548390 RBM46Q8TBY0 533 aaKnown RBP20.18■□□□□ 0.82
LETMD1-215ENST00000548390 DDX11Q96FC9 970 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms