RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 ANTXR1Q9H6X2 564 aa6.67□□□□□ -1.34
DEPDC4-205ENST00000548313 LRRC4CQ9HCJ2 640 aa6.67□□□□□ -1.34
DEPDC4-205ENST00000548313 GNAT3A8MTJ3 354 aa6.66□□□□□ -1.34
DEPDC4-205ENST00000548313 ZNF865P0CJ78 1059 aaPredicted RBP6.66□□□□□ -1.34
DEPDC4-205ENST00000548313 OXCT1P55809 520 aa6.66□□□□□ -1.34
DEPDC4-205ENST00000548313 CHMP4BP1P59074 171 aa6.66□□□□□ -1.34
DEPDC4-205ENST00000548313 CCDC81Q6ZN84 652 aa6.66□□□□□ -1.34
DEPDC4-205ENST00000548313 LSRQ86X29 649 aaPredicted RBP6.66□□□□□ -1.34
DEPDC4-205ENST00000548313 C19orf47Q8N9M1 422 aaKnown RBP6.66□□□□□ -1.34
DEPDC4-205ENST00000548313 NETO1Q8TDF5 533 aa6.66□□□□□ -1.34
DEPDC4-205ENST00000548313 RNF141Q8WVD5 230 aa6.66□□□□□ -1.34
DEPDC4-205ENST00000548313 SHDQ96IW2 340 aa6.66□□□□□ -1.34
DEPDC4-205ENST00000548313 DHRS1Q96LJ7 313 aa6.66□□□□□ -1.34
DEPDC4-205ENST00000548313 DBX1A6NMT0 343 aa6.65□□□□□ -1.34
DEPDC4-205ENST00000548313 UBOX5O94941 541 aa6.65□□□□□ -1.34
DEPDC4-205ENST00000548313 SSBP05455 408 aaKnown RBP eCLIP6.65□□□□□ -1.34
DEPDC4-205ENST00000548313 FGRP09769 529 aa6.65□□□□□ -1.34
DEPDC4-205ENST00000548313 GUCY2CP25092 1073 aa6.65□□□□□ -1.34
DEPDC4-205ENST00000548313 DNAJA1P31689 397 aaKnown RBP6.65□□□□□ -1.34
DEPDC4-205ENST00000548313 FBLN7Q53RD9 439 aa6.65□□□□□ -1.34
DEPDC4-205ENST00000548313 SLC9A7Q96T83 725 aa6.65□□□□□ -1.34
DEPDC4-205ENST00000548313 ASPNQ9BXN1 380 aa6.65□□□□□ -1.34
DEPDC4-205ENST00000548313 ZC3H7BQ9UGR2 993 aaKnown RBP6.65□□□□□ -1.34
DEPDC4-205ENST00000548313 SNX11Q9Y5W9 270 aa6.65□□□□□ -1.34
DEPDC4-205ENST00000548313 SLC12A7Q9Y666 1083 aa6.65□□□□□ -1.34
DEPDC4-205ENST00000548313 TMEM265A0A087WTH1 108 aa6.64□□□□□ -1.35
DEPDC4-205ENST00000548313 PAPLNO95428 1278 aa6.64□□□□□ -1.35
DEPDC4-205ENST00000548313 CASP7P55210 303 aa6.64□□□□□ -1.35
DEPDC4-205ENST00000548313 RNF4P78317 190 aa6.64□□□□□ -1.35
DEPDC4-205ENST00000548313 IFI16Q16666 785 aaKnown RBP6.64□□□□□ -1.35
DEPDC4-205ENST00000548313 ZNF648Q5T619 568 aaPredicted RBP6.64□□□□□ -1.35
DEPDC4-205ENST00000548313 MCF2L2Q86YR7 1114 aa6.64□□□□□ -1.35
DEPDC4-205ENST00000548313 MFSD4AQ8N468 514 aa6.64□□□□□ -1.35
DEPDC4-205ENST00000548313 FAM181AQ8N9Y4 354 aa6.64□□□□□ -1.35
DEPDC4-205ENST00000548313 PIWIL2Q8TC59 973 aaKnown RBP6.64□□□□□ -1.35
DEPDC4-205ENST00000548313 MISP3Q96FF7 219 aa6.64□□□□□ -1.35
DEPDC4-205ENST00000548313 KREMEN1Q96MU8 473 aa6.64□□□□□ -1.35
DEPDC4-205ENST00000548313 TNKS2Q9H2K2 1166 aa6.64□□□□□ -1.35
DEPDC4-205ENST00000548313 CLEC3AO75596 197 aa6.63□□□□□ -1.35
DEPDC4-205ENST00000548313 FARP2O94887 1054 aaPredicted RBP6.63□□□□□ -1.35
DEPDC4-205ENST00000548313 CEACAM5P06731 702 aa6.63□□□□□ -1.35
DEPDC4-205ENST00000548313 ACRP10323 421 aa6.63□□□□□ -1.35
DEPDC4-205ENST00000548313 CLCN7P51798 805 aa6.63□□□□□ -1.35
DEPDC4-205ENST00000548313 PKN1Q16512 942 aa6.63□□□□□ -1.35
DEPDC4-205ENST00000548313 STK11IPQ8N1F8 1099 aa6.63□□□□□ -1.35
DEPDC4-205ENST00000548313 VWCEQ96DN2 955 aa6.63□□□□□ -1.35
DEPDC4-205ENST00000548313 CNTNAP4Q9C0A0 1308 aa6.63□□□□□ -1.35
DEPDC4-205ENST00000548313 KCNH3Q9ULD8 1083 aa6.63□□□□□ -1.35
DEPDC4-205ENST00000548313 SLC5A6Q9Y289 635 aa6.63□□□□□ -1.35
DEPDC4-205ENST00000548313 FAM155AB1AL88 458 aaPredicted RBP6.62□□□□□ -1.35
DEPDC4-205ENST00000548313 CBX7O95931 251 aa6.62□□□□□ -1.35
DEPDC4-205ENST00000548313 POLR2BP30876 1174 aaKnown RBP6.62□□□□□ -1.35
DEPDC4-205ENST00000548313 PLCL1Q15111 1095 aa6.62□□□□□ -1.35
DEPDC4-205ENST00000548313 NKPD1Q17RQ9 610 aa6.62□□□□□ -1.35
DEPDC4-205ENST00000548313 TNNI3KQ59H18 835 aa6.62□□□□□ -1.35
DEPDC4-205ENST00000548313 UNC5AQ6ZN44 842 aa6.62□□□□□ -1.35
DEPDC4-205ENST00000548313 RUFY4Q6ZNE9 571 aa6.62□□□□□ -1.35
DEPDC4-205ENST00000548313 ANAPC16Q96DE5 110 aa6.62□□□□□ -1.35
DEPDC4-205ENST00000548313 VAV3Q9UKW4 847 aa6.62□□□□□ -1.35
DEPDC4-205ENST00000548313 PLAGL2Q9UPG8 496 aa6.62□□□□□ -1.35
DEPDC4-205ENST00000548313 CAPN6Q9Y6Q1 641 aa6.62□□□□□ -1.35
DEPDC4-205ENST00000548313 SF3A1Q15459 793 aaKnown RBP6.61□□□□□ -1.35
DEPDC4-205ENST00000548313 BBS9Q3SYG4 887 aa6.61□□□□□ -1.35
DEPDC4-205ENST00000548313 LCE4AQ5TA78 99 aa6.61□□□□□ -1.35
DEPDC4-205ENST00000548313 NBPF12Q5TAG4 269 aaPredicted RBP6.61□□□□□ -1.35
DEPDC4-205ENST00000548313 TTC6Q86TZ1 520 aa6.61□□□□□ -1.35
DEPDC4-205ENST00000548313 SPACA3Q8IXA5 215 aa6.61□□□□□ -1.35
DEPDC4-205ENST00000548313 TMEM192Q8IY95 271 aa6.61□□□□□ -1.35
DEPDC4-205ENST00000548313 PLD6Q8N2A8 252 aaKnown RBP6.61□□□□□ -1.35
DEPDC4-205ENST00000548313 BCL7CQ8WUZ0 217 aaPredicted RBP6.61□□□□□ -1.35
DEPDC4-205ENST00000548313 SLC6A18Q96N87 628 aa6.61□□□□□ -1.35
DEPDC4-205ENST00000548313 SUCOQ9UBS9 1254 aaKnown RBP6.61□□□□□ -1.35
DEPDC4-205ENST00000548313 U3KQE9 123 aa6.61□□□□□ -1.35
DEPDC4-205ENST00000548313 A0A1W2PQH9 124 aa6.6□□□□□ -1.35
DEPDC4-205ENST00000548313 PRR33A8MZF0 331 aa6.6□□□□□ -1.35
DEPDC4-205ENST00000548313 ITIH2P19823 946 aa6.6□□□□□ -1.35
DEPDC4-205ENST00000548313 ATP2B1P20020 1258 aa6.6□□□□□ -1.35
DEPDC4-205ENST00000548313 PMS1P54277 932 aaKnown RBP6.6□□□□□ -1.35
DEPDC4-205ENST00000548313 PRKCQQ04759 706 aa6.6□□□□□ -1.35
DEPDC4-205ENST00000548313 ZNF124Q15973 351 aa6.6□□□□□ -1.35
DEPDC4-205ENST00000548313 ZNF792Q3KQV3 632 aa6.6□□□□□ -1.35
DEPDC4-205ENST00000548313 THAP5Q7Z6K1 395 aa6.6□□□□□ -1.35
DEPDC4-205ENST00000548313 SMARCC1Q92922 1105 aaPredicted RBP6.6□□□□□ -1.35
DEPDC4-205ENST00000548313 ARMC5Q96C12 935 aa6.6□□□□□ -1.35
DEPDC4-205ENST00000548313 Q96M66 194 aa6.6□□□□□ -1.35
DEPDC4-205ENST00000548313 TANGO6Q9C0B7 1094 aa6.6□□□□□ -1.35
DEPDC4-205ENST00000548313 PHAXQ9H814 394 aaKnown RBP6.6□□□□□ -1.35
DEPDC4-205ENST00000548313 PRKAG3Q9UGI9 489 aa6.6□□□□□ -1.35
DEPDC4-205ENST00000548313 ZNF214Q9UL59 606 aaPredicted RBP6.6□□□□□ -1.35
DEPDC4-205ENST00000548313 TNK2Q07912 1038 aa6.59□□□□□ -1.35
DEPDC4-205ENST00000548313 PPP2R5EQ16537 467 aa6.59□□□□□ -1.35
DEPDC4-205ENST00000548313 SPOCD1Q6ZMY3 1216 aa6.59□□□□□ -1.35
DEPDC4-205ENST00000548313 ATG4DQ86TL0 474 aaPredicted RBP6.59□□□□□ -1.35
DEPDC4-205ENST00000548313 FAM169BQ8N8A8 192 aa6.59□□□□□ -1.35
DEPDC4-205ENST00000548313 DTWD2Q8NBA8 298 aa6.59□□□□□ -1.35
DEPDC4-205ENST00000548313 ASB11Q8WXH4 323 aa6.59□□□□□ -1.35
DEPDC4-205ENST00000548313 HRASLS5Q96KN8 279 aa6.59□□□□□ -1.35
DEPDC4-205ENST00000548313 GPR62Q9BZJ7 368 aa6.59□□□□□ -1.35
DEPDC4-205ENST00000548313 TRIT1Q9H3H1 467 aaKnown RBP6.59□□□□□ -1.35
DEPDC4-205ENST00000548313 ZNF408Q9H9D4 720 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms