RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 ANKS1AQ92625 1134 aa20.09■□□□□ 0.81
KRT4-201ENST00000548097 AFG3L2Q9Y4W6 797 aa20.09■□□□□ 0.81
KRT4-201ENST00000548097 SPDYE5A6NIY4 337 aa20.08■□□□□ 0.8
KRT4-201ENST00000548097 HTRA3P83110 453 aa20.08■□□□□ 0.8
KRT4-201ENST00000548097 CCDC178Q5BJE1 867 aa20.08■□□□□ 0.8
KRT4-201ENST00000548097 APOA5Q6Q788 366 aa20.08■□□□□ 0.8
KRT4-201ENST00000548097 SGMS1Q86VZ5 419 aa20.08■□□□□ 0.8
KRT4-201ENST00000548097 ERO1BQ86YB8 467 aa20.08■□□□□ 0.8
KRT4-201ENST00000548097 ZNF654Q8IZM8 581 aa20.08■□□□□ 0.8
KRT4-201ENST00000548097 MTA3Q9BTC8 594 aa20.08■□□□□ 0.8
KRT4-201ENST00000548097 ALDH8A1Q9H2A2 487 aaPredicted RBP20.08■□□□□ 0.8
KRT4-201ENST00000548097 GINM1Q9NU53 330 aa20.08■□□□□ 0.8
KRT4-201ENST00000548097 TMX2Q9Y320 296 aa20.08■□□□□ 0.8
KRT4-201ENST00000548097 SLC12A7Q9Y666 1083 aa20.08■□□□□ 0.8
KRT4-201ENST00000548097 CCT2P78371 535 aaKnown RBP20.07■□□□□ 0.8
KRT4-201ENST00000548097 FBXL16Q8N461 479 aa20.07■□□□□ 0.8
KRT4-201ENST00000548097 MKL1Q969V6 931 aa20.07■□□□□ 0.8
KRT4-201ENST00000548097 NUP88Q99567 741 aaPredicted RBP20.07■□□□□ 0.8
KRT4-201ENST00000548097 AS3MTQ9HBK9 375 aa20.07■□□□□ 0.8
KRT4-201ENST00000548097 TLL2Q9Y6L7 1015 aa20.07■□□□□ 0.8
KRT4-201ENST00000548097 GOLGA8BA8MQT2 603 aa20.06■□□□□ 0.8
KRT4-201ENST00000548097 USP17L10C9JJH3 530 aa20.06■□□□□ 0.8
KRT4-201ENST00000548097 GOLGA8HP0CJ92 632 aa20.06■□□□□ 0.8
KRT4-201ENST00000548097 HMGCS2P54868 508 aa20.06■□□□□ 0.8
KRT4-201ENST00000548097 PPATQ06203 517 aa20.06■□□□□ 0.8
KRT4-201ENST00000548097 GRM1Q13255 1194 aa20.06■□□□□ 0.8
KRT4-201ENST00000548097 ME3Q16798 604 aa20.06■□□□□ 0.8
KRT4-201ENST00000548097 NECAB1Q8N987 351 aa20.06■□□□□ 0.8
KRT4-201ENST00000548097 F5H6K3 240 aa20.06■□□□□ 0.8
KRT4-201ENST00000548097 PDIA3P30101 505 aaKnown RBP20.06■□□□□ 0.8
KRT4-201ENST00000548097 ZNF157P51786 506 aaPredicted RBP20.06■□□□□ 0.8
KRT4-201ENST00000548097 KLRC3Q07444 240 aa20.06■□□□□ 0.8
KRT4-201ENST00000548097 ANKRD1Q15327 319 aa20.06■□□□□ 0.8
KRT4-201ENST00000548097 CATIPQ7Z7H3 387 aa20.06■□□□□ 0.8
KRT4-201ENST00000548097 TMTC2Q8N394 836 aa20.06■□□□□ 0.8
KRT4-201ENST00000548097 WDR18Q9BV38 432 aa20.06■□□□□ 0.8
KRT4-201ENST00000548097 NCOA5Q9HCD5 579 aaKnown RBP20.06■□□□□ 0.8
KRT4-201ENST00000548097 HPS5Q9UPZ3 1129 aa20.06■□□□□ 0.8
KRT4-201ENST00000548097 FRMPD2Q68DX3 1309 aaPredicted RBP20.05■□□□□ 0.8
KRT4-201ENST00000548097 PPFIA3O75145 1194 aa20.05■□□□□ 0.8
KRT4-201ENST00000548097 NDUFB10O96000 172 aa20.05■□□□□ 0.8
KRT4-201ENST00000548097 TROAPQ12815 778 aa20.05■□□□□ 0.8
KRT4-201ENST00000548097 USP17L2Q6R6M4 530 aa20.05■□□□□ 0.8
KRT4-201ENST00000548097 WNK4Q96J92 1243 aa20.05■□□□□ 0.8
KRT4-201ENST00000548097 EMILIN3Q9NT22 766 aa20.05■□□□□ 0.8
KRT4-201ENST00000548097 ISY1Q9ULR0 285 aaKnown RBP20.05■□□□□ 0.8
KRT4-201ENST00000548097 LIMCH1Q9UPQ0 1083 aa20.05■□□□□ 0.8
KRT4-201ENST00000548097 ZBTB43O43298 467 aa20.04■□□□□ 0.8
KRT4-201ENST00000548097 APLP1P51693 650 aa20.04■□□□□ 0.8
KRT4-201ENST00000548097 BACE1P56817 501 aa20.04■□□□□ 0.8
KRT4-201ENST00000548097 SLFN13Q68D06 897 aa20.04■□□□□ 0.8
KRT4-201ENST00000548097 PAXIP1Q6ZW49 1069 aaPredicted RBP20.04■□□□□ 0.8
KRT4-201ENST00000548097 KCTD1Q719H9 257 aa20.04■□□□□ 0.8
KRT4-201ENST00000548097 CMTR1Q8N1G2 835 aaKnown RBP20.04■□□□□ 0.8
KRT4-201ENST00000548097 PDHBP11177 359 aa20.04■□□□□ 0.8
KRT4-201ENST00000548097 PPIL2Q13356 520 aa20.04■□□□□ 0.8
KRT4-201ENST00000548097 RGMBQ6NW40 437 aa20.04■□□□□ 0.8
KRT4-201ENST00000548097 STAG2Q8N3U4 1231 aa20.04■□□□□ 0.8
KRT4-201ENST00000548097 TBC1D2Q9BYX2 928 aa20.04■□□□□ 0.8
KRT4-201ENST00000548097 KIAA1683Q9H0B3 1180 aa20.04■□□□□ 0.8
KRT4-201ENST00000548097 CPVLQ9H3G5 476 aa20.04■□□□□ 0.8
KRT4-201ENST00000548097 VCPKMTQ9H867 229 aa20.04■□□□□ 0.8
KRT4-201ENST00000548097 CDC27P30260 824 aa20.03■□□□□ 0.8
KRT4-201ENST00000548097 EVCP57679 992 aa20.03■□□□□ 0.8
KRT4-201ENST00000548097 ST3GAL1Q11201 340 aa20.03■□□□□ 0.8
KRT4-201ENST00000548097 PPP4R3BQ5MIZ7 849 aa20.03■□□□□ 0.8
KRT4-201ENST00000548097 SYNE3Q6ZMZ3 975 aa20.03■□□□□ 0.8
KRT4-201ENST00000548097 RASAL3Q86YV0 1011 aa20.03■□□□□ 0.8
KRT4-201ENST00000548097 GPCPD1Q9NPB8 672 aa20.03■□□□□ 0.8
KRT4-201ENST00000548097 UNCXA6NJT0 531 aa20.02■□□□□ 0.8
KRT4-201ENST00000548097 GOLGA8AA7E2F4 631 aa20.02■□□□□ 0.8
KRT4-201ENST00000548097 METAP2P50579 478 aaKnown RBP eCLIP20.02■□□□□ 0.8
KRT4-201ENST00000548097 SCRN1Q12765 414 aa20.02■□□□□ 0.8
KRT4-201ENST00000548097 SPRYD7Q5W111 196 aa20.02■□□□□ 0.8
KRT4-201ENST00000548097 CYP4F22Q6NT55 531 aa20.02■□□□□ 0.8
KRT4-201ENST00000548097 TMX3Q96JJ7 454 aa20.02■□□□□ 0.8
KRT4-201ENST00000548097 GOPCQ9HD26 462 aa20.02■□□□□ 0.8
KRT4-201ENST00000548097 PTPRFP10586 1907 aa20.02■□□□□ 0.8
KRT4-201ENST00000548097 ADD1P35611 737 aaKnown RBP20.02■□□□□ 0.79
KRT4-201ENST00000548097 SLC1A4P43007 532 aa20.02■□□□□ 0.79
KRT4-201ENST00000548097 CCDC96Q2M329 555 aa20.02■□□□□ 0.79
KRT4-201ENST00000548097 FAM83BQ5T0W9 1011 aa20.02■□□□□ 0.79
KRT4-201ENST00000548097 TTBK2Q6IQ55 1244 aa20.02■□□□□ 0.79
KRT4-201ENST00000548097 SAMD1Q6SPF0 538 aaPredicted RBP20.02■□□□□ 0.79
KRT4-201ENST00000548097 CCDC82Q8N4S0 544 aa20.02■□□□□ 0.79
KRT4-201ENST00000548097 GMCL1P1Q8NEA9 526 aa20.02■□□□□ 0.79
KRT4-201ENST00000548097 ZNF274Q96GC6 653 aaPredicted RBP20.02■□□□□ 0.79
KRT4-201ENST00000548097 SLKQ9H2G2 1235 aaPredicted RBP20.02■□□□□ 0.79
KRT4-201ENST00000548097 SH2D4AQ9H788 454 aa20.02■□□□□ 0.79
KRT4-201ENST00000548097 FAM217BQ9NTX9 383 aaPredicted RBP20.02■□□□□ 0.79
KRT4-201ENST00000548097 MAD2L2Q9UI95 211 aa20.02■□□□□ 0.79
KRT4-201ENST00000548097 DDAH1O94760 285 aa20.01■□□□□ 0.79
KRT4-201ENST00000548097 PLEKHA8P1O95397 391 aa20.01■□□□□ 0.79
KRT4-201ENST00000548097 SLC4A3P48751 1232 aa20.01■□□□□ 0.79
KRT4-201ENST00000548097 TREML2Q5T2D2 321 aa20.01■□□□□ 0.79
KRT4-201ENST00000548097 GADL1Q6ZQY3 521 aa20.01■□□□□ 0.79
KRT4-201ENST00000548097 CCDC83Q8IWF9 413 aa20.01■□□□□ 0.79
KRT4-201ENST00000548097 FANCBQ8NB91 859 aa20.01■□□□□ 0.79
KRT4-201ENST00000548097 SNX21Q969T3 373 aa20.01■□□□□ 0.79
KRT4-201ENST00000548097 KCNH4Q9UQ05 1017 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms