RNA–Protein interactions for RNA: ENST00000548086.2

SCN8A-205, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 1,966 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-205ENST00000548086 OTOFQ9HC10 1997 aa12.88□□□□□ -0.35
SCN8A-205ENST00000548086 GOLGA8AA7E2F4 631 aa12.88□□□□□ -0.35
SCN8A-205ENST00000548086 ESPNB1AK53 854 aa12.88□□□□□ -0.35
SCN8A-205ENST00000548086 ADD1P35611 737 aaKnown RBP12.88□□□□□ -0.35
SCN8A-205ENST00000548086 ECE1P42892 770 aa12.88□□□□□ -0.35
SCN8A-205ENST00000548086 NOVP48745 357 aa12.88□□□□□ -0.35
SCN8A-205ENST00000548086 METAP2P50579 478 aaKnown RBP eCLIP12.88□□□□□ -0.35
SCN8A-205ENST00000548086 CCDC173Q0VFZ6 552 aa12.88□□□□□ -0.35
SCN8A-205ENST00000548086 TROAPQ12815 778 aa12.88□□□□□ -0.35
SCN8A-205ENST00000548086 SUPT20HL1Q3ZLR7 823 aa12.88□□□□□ -0.35
SCN8A-205ENST00000548086 DCAF15Q66K64 600 aa12.88□□□□□ -0.35
SCN8A-205ENST00000548086 ZNF341Q9BYN7 854 aa12.88□□□□□ -0.35
SCN8A-205ENST00000548086 ZNF408Q9H9D4 720 aa12.88□□□□□ -0.35
SCN8A-205ENST00000548086 CABP5Q9NP86 173 aa12.88□□□□□ -0.35
SCN8A-205ENST00000548086 FAM217BQ9NTX9 383 aaPredicted RBP12.88□□□□□ -0.35
SCN8A-205ENST00000548086 A0A1W2PRG0 241 aa12.87□□□□□ -0.35
SCN8A-205ENST00000548086 JAK2O60674 1132 aa12.87□□□□□ -0.35
SCN8A-205ENST00000548086 USP2O75604 605 aaPredicted RBP12.87□□□□□ -0.35
SCN8A-205ENST00000548086 CTDNEP1O95476 244 aa12.87□□□□□ -0.35
SCN8A-205ENST00000548086 BRD1O95696 1058 aa12.87□□□□□ -0.35
SCN8A-205ENST00000548086 TTLL1O95922 423 aa12.87□□□□□ -0.35
SCN8A-205ENST00000548086 ZSCAN23Q3MJ62 389 aa12.87□□□□□ -0.35
SCN8A-205ENST00000548086 MCTP1Q6DN14 999 aa12.87□□□□□ -0.35
SCN8A-205ENST00000548086 CATIPQ7Z7H3 387 aa12.87□□□□□ -0.35
SCN8A-205ENST00000548086 LDHDQ86WU2 507 aa12.87□□□□□ -0.35
SCN8A-205ENST00000548086 TMTC2Q8N394 836 aa12.87□□□□□ -0.35
SCN8A-205ENST00000548086 ACER1Q8TDN7 264 aa12.87□□□□□ -0.35
SCN8A-205ENST00000548086 ANKS1AQ92625 1134 aa12.87□□□□□ -0.35
SCN8A-205ENST00000548086 KLRG1Q96E93 195 aa12.87□□□□□ -0.35
SCN8A-205ENST00000548086 KANSL2Q9H9L4 492 aa12.87□□□□□ -0.35
SCN8A-205ENST00000548086 DOCK1Q14185 1865 aa12.87□□□□□ -0.35
SCN8A-205ENST00000548086 RAD21O60216 631 aa12.87□□□□□ -0.35
SCN8A-205ENST00000548086 TOP1P11387 765 aaKnown RBP12.87□□□□□ -0.35
SCN8A-205ENST00000548086 NT5C2P49902 561 aa12.87□□□□□ -0.35
SCN8A-205ENST00000548086 SYNE3Q6ZMZ3 975 aa12.87□□□□□ -0.35
SCN8A-205ENST00000548086 CCDC82Q8N4S0 544 aa12.87□□□□□ -0.35
SCN8A-205ENST00000548086 GPT2Q8TD30 523 aa12.87□□□□□ -0.35
SCN8A-205ENST00000548086 ZNF112Q9UJU3 913 aa12.87□□□□□ -0.35
SCN8A-205ENST00000548086 PAPPA2Q9BXP8 1791 aa12.86□□□□□ -0.35
SCN8A-205ENST00000548086 UBE2Q2LH0YL09 131 aa12.86□□□□□ -0.35
SCN8A-205ENST00000548086 GOLGA8HP0CJ92 632 aa12.86□□□□□ -0.35
SCN8A-205ENST00000548086 DGKZQ13574 1117 aa12.86□□□□□ -0.35
SCN8A-205ENST00000548086 ZYXQ15942 572 aaKnown RBP12.86□□□□□ -0.35
SCN8A-205ENST00000548086 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.86□□□□□ -0.35
SCN8A-205ENST00000548086 DDX11Q96FC9 970 aa12.86□□□□□ -0.35
SCN8A-205ENST00000548086 GPBP1L1Q9HC44 474 aaPredicted RBP12.86□□□□□ -0.35
SCN8A-205ENST00000548086 TAOK2Q9UL54 1235 aa12.86□□□□□ -0.35
SCN8A-205ENST00000548086 USP17L5A8MUK1 530 aa12.85□□□□□ -0.35
SCN8A-205ENST00000548086 CTNND1O60716 968 aaKnown RBP12.85□□□□□ -0.35
SCN8A-205ENST00000548086 PLEKHA8P1O95397 391 aa12.85□□□□□ -0.35
SCN8A-205ENST00000548086 ASNSP08243 561 aa12.85□□□□□ -0.35
SCN8A-205ENST00000548086 NASPP49321 788 aaPredicted RBP12.85□□□□□ -0.35
SCN8A-205ENST00000548086 TTLL12Q14166 644 aaPredicted RBP12.85□□□□□ -0.35
SCN8A-205ENST00000548086 RTN1Q16799 776 aa12.85□□□□□ -0.35
SCN8A-205ENST00000548086 CCDC178Q5BJE1 867 aa12.85□□□□□ -0.35
SCN8A-205ENST00000548086 USP17L2Q6R6M4 530 aa12.85□□□□□ -0.35
SCN8A-205ENST00000548086 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.85□□□□□ -0.35
SCN8A-205ENST00000548086 STAG2Q8N3U4 1231 aa12.85□□□□□ -0.35
SCN8A-205ENST00000548086 FANCBQ8NB91 859 aa12.85□□□□□ -0.35
SCN8A-205ENST00000548086 NSUN7Q8NE18 718 aaKnown RBP12.85□□□□□ -0.35
SCN8A-205ENST00000548086 HOOK2Q96ED9 719 aa12.85□□□□□ -0.35
SCN8A-205ENST00000548086 PDLIM2Q96JY6 352 aa12.85□□□□□ -0.35
SCN8A-205ENST00000548086 CPVLQ9H3G5 476 aa12.85□□□□□ -0.35
SCN8A-205ENST00000548086 DDAH1O94760 285 aa12.85□□□□□ -0.35
SCN8A-205ENST00000548086 VGLL4Q14135 290 aa12.85□□□□□ -0.35
SCN8A-205ENST00000548086 KIAA1755Q5JYT7 1200 aa12.85□□□□□ -0.35
SCN8A-205ENST00000548086 SCYL3Q8IZE3 742 aa12.85□□□□□ -0.35
SCN8A-205ENST00000548086 SPICE1Q8N0Z3 855 aa12.85□□□□□ -0.35
SCN8A-205ENST00000548086 CNKSR2Q8WXI2 1034 aa12.85□□□□□ -0.35
SCN8A-205ENST00000548086 PHKBQ93100 1093 aa12.85□□□□□ -0.35
SCN8A-205ENST00000548086 CLMNQ96JQ2 1002 aa12.85□□□□□ -0.35
SCN8A-205ENST00000548086 NYAP2Q9P242 653 aa12.85□□□□□ -0.35
SCN8A-205ENST00000548086 FRMPD2Q68DX3 1309 aaPredicted RBP12.85□□□□□ -0.35
SCN8A-205ENST00000548086 BAZ2BQ9UIF8 2168 aaKnown RBP12.84□□□□□ -0.35
SCN8A-205ENST00000548086 PTPDC1A2A3K4 754 aa12.84□□□□□ -0.35
SCN8A-205ENST00000548086 PPP1R12BO60237 982 aaPredicted RBP12.84□□□□□ -0.35
SCN8A-205ENST00000548086 NBPF11Q86T75 865 aa12.84□□□□□ -0.35
SCN8A-205ENST00000548086 NUP88Q99567 741 aaPredicted RBP12.84□□□□□ -0.35
SCN8A-205ENST00000548086 NID2Q14112 1375 aa12.83□□□□□ -0.35
SCN8A-205ENST00000548086 hCG_1642624A0A1W2PR95 340 aa12.83□□□□□ -0.35
SCN8A-205ENST00000548086 CPLX1O14810 134 aa12.83□□□□□ -0.35
SCN8A-205ENST00000548086 PDHBP11177 359 aa12.83□□□□□ -0.35
SCN8A-205ENST00000548086 GJB2P29033 226 aa12.83□□□□□ -0.35
SCN8A-205ENST00000548086 NF2P35240 595 aa12.83□□□□□ -0.35
SCN8A-205ENST00000548086 FOSBP53539 338 aa12.83□□□□□ -0.35
SCN8A-205ENST00000548086 NTRK3Q16288 839 aa12.83□□□□□ -0.35
SCN8A-205ENST00000548086 CAVIN1Q6NZI2 390 aaKnown RBP12.83□□□□□ -0.35
SCN8A-205ENST00000548086 PIBF1Q8WXW3 757 aa12.83□□□□□ -0.35
SCN8A-205ENST00000548086 MAD2L2Q9UI95 211 aa12.83□□□□□ -0.35
SCN8A-205ENST00000548086 SMC3Q9UQE7 1217 aa12.83□□□□□ -0.35
SCN8A-205ENST00000548086 SNCAIPQ9Y6H5 919 aa12.83□□□□□ -0.35
SCN8A-205ENST00000548086 PHIPQ8WWQ0 1821 aa12.83□□□□□ -0.36
SCN8A-205ENST00000548086 KIF3CO14782 793 aa12.83□□□□□ -0.36
SCN8A-205ENST00000548086 PTPRAP18433 802 aa12.83□□□□□ -0.36
SCN8A-205ENST00000548086 GRM4Q14833 912 aa12.83□□□□□ -0.36
SCN8A-205ENST00000548086 SLC35G1Q2M3R5 365 aa12.83□□□□□ -0.36
SCN8A-205ENST00000548086 HS1BP3Q53T59 392 aa12.83□□□□□ -0.36
SCN8A-205ENST00000548086 KCTD1Q719H9 257 aa12.83□□□□□ -0.36
SCN8A-205ENST00000548086 CTCFLQ8NI51 663 aaPredicted RBP12.83□□□□□ -0.36
SCN8A-205ENST00000548086 MKL1Q969V6 931 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms