RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 CYP2C8P10632 490 aa20.45■□□□□ 0.86
HDAC7-227ENST00000548080 EEF2P13639 858 aaKnown RBP20.45■□□□□ 0.86
HDAC7-227ENST00000548080 CPA1P15085 419 aa20.45■□□□□ 0.86
HDAC7-227ENST00000548080 ZNF287Q9HBT7 754 aa20.45■□□□□ 0.86
HDAC7-227ENST00000548080 TMOD4Q9NZQ9 345 aa20.45■□□□□ 0.86
HDAC7-227ENST00000548080 MYH4Q9Y623 1939 aa20.45■□□□□ 0.86
HDAC7-227ENST00000548080 NMT2O60551 498 aa20.44■□□□□ 0.86
HDAC7-227ENST00000548080 HMGB1P09429 215 aaKnown RBP20.44■□□□□ 0.86
HDAC7-227ENST00000548080 TSPY3P0CV98 308 aa20.44■□□□□ 0.86
HDAC7-227ENST00000548080 TSPY8P0CW00 308 aa20.44■□□□□ 0.86
HDAC7-227ENST00000548080 RPS6KB1P23443 525 aa20.44■□□□□ 0.86
HDAC7-227ENST00000548080 SH3D19Q5HYK7 790 aa20.44■□□□□ 0.86
HDAC7-227ENST00000548080 KIAA1755Q5JYT7 1200 aa20.44■□□□□ 0.86
HDAC7-227ENST00000548080 AKNAD1Q5T1N1 836 aa20.44■□□□□ 0.86
HDAC7-227ENST00000548080 AGTPBP1Q9UPW5 1226 aa20.44■□□□□ 0.86
HDAC7-227ENST00000548080 RAD21O60216 631 aa20.43■□□□□ 0.86
HDAC7-227ENST00000548080 ECM2O94769 699 aaPredicted RBP20.43■□□□□ 0.86
HDAC7-227ENST00000548080 USP17L2Q6R6M4 530 aa20.43■□□□□ 0.86
HDAC7-227ENST00000548080 PROCA1Q8NCQ7 364 aaPredicted RBP20.43■□□□□ 0.86
HDAC7-227ENST00000548080 CEP95Q96GE4 821 aa20.43■□□□□ 0.86
HDAC7-227ENST00000548080 ALDH8A1Q9H2A2 487 aaPredicted RBP20.43■□□□□ 0.86
HDAC7-227ENST00000548080 IGKV6D-41A0A0C4DH26 115 aa20.43■□□□□ 0.86
HDAC7-227ENST00000548080 TSPY2A6NKD2 308 aa20.43■□□□□ 0.86
HDAC7-227ENST00000548080 C19orf81C9J6K1 198 aa20.43■□□□□ 0.86
HDAC7-227ENST00000548080 ORC4O43929 436 aa20.43■□□□□ 0.86
HDAC7-227ENST00000548080 MFSD6Q6ZSS7 791 aa20.43■□□□□ 0.86
HDAC7-227ENST00000548080 SPICE1Q8N0Z3 855 aa20.43■□□□□ 0.86
HDAC7-227ENST00000548080 STAG1Q8WVM7 1258 aa20.43■□□□□ 0.86
HDAC7-227ENST00000548080 CHMP4CQ96CF2 233 aa20.43■□□□□ 0.86
HDAC7-227ENST00000548080 KIAA1683Q9H0B3 1180 aa20.43■□□□□ 0.86
HDAC7-227ENST00000548080 KANSL2Q9H9L4 492 aa20.43■□□□□ 0.86
HDAC7-227ENST00000548080 ZFYVE28Q9HCC9 887 aa20.43■□□□□ 0.86
HDAC7-227ENST00000548080 ARHGEF10LQ9HCE6 1279 aa20.43■□□□□ 0.86
HDAC7-227ENST00000548080 AK2P54819 239 aa20.42■□□□□ 0.86
HDAC7-227ENST00000548080 NEDD1Q8NHV4 660 aa20.42■□□□□ 0.86
HDAC7-227ENST00000548080 CLIP2Q9UDT6 1046 aa20.42■□□□□ 0.86
HDAC7-227ENST00000548080 CPA4Q9UI42 421 aa20.42■□□□□ 0.86
HDAC7-227ENST00000548080 GPR25O00155 361 aa20.41■□□□□ 0.86
HDAC7-227ENST00000548080 FGRP09769 529 aa20.41■□□□□ 0.86
HDAC7-227ENST00000548080 COL9A3Q14050 684 aaPredicted RBP20.41■□□□□ 0.86
HDAC7-227ENST00000548080 DHX32Q7L7V1 743 aaKnown RBP20.41■□□□□ 0.86
HDAC7-227ENST00000548080 ZNF296Q8WUU4 475 aaPredicted RBP20.41■□□□□ 0.86
HDAC7-227ENST00000548080 PLIN4Q96Q06 1357 aa20.41■□□□□ 0.86
HDAC7-227ENST00000548080 ZSWIM8A7E2V4 1837 aa20.41■□□□□ 0.86
HDAC7-227ENST00000548080 B4E1Z4 1266 aa20.4■□□□□ 0.86
HDAC7-227ENST00000548080 PEX10O60683 326 aa20.4■□□□□ 0.86
HDAC7-227ENST00000548080 VCAM1P19320 739 aa20.4■□□□□ 0.86
HDAC7-227ENST00000548080 USP14P54578 494 aa20.4■□□□□ 0.86
HDAC7-227ENST00000548080 ANKRD1Q15327 319 aa20.4■□□□□ 0.86
HDAC7-227ENST00000548080 LRRC47Q8N1G4 583 aaKnown RBP20.4■□□□□ 0.86
HDAC7-227ENST00000548080 NCOA7Q8NI08 942 aa20.4■□□□□ 0.86
HDAC7-227ENST00000548080 CFHR5Q9BXR6 569 aa20.4■□□□□ 0.86
HDAC7-227ENST00000548080 ASCC2Q9H1I8 757 aaPredicted RBP20.4■□□□□ 0.86
HDAC7-227ENST00000548080 IL17RBQ9NRM6 502 aa20.4■□□□□ 0.86
HDAC7-227ENST00000548080 MTMR4Q9NYA4 1195 aa20.4■□□□□ 0.86
HDAC7-227ENST00000548080 TMX2Q9Y320 296 aa20.4■□□□□ 0.86
HDAC7-227ENST00000548080 EXOSC10Q01780 885 aaKnown RBP20.39■□□□□ 0.85
HDAC7-227ENST00000548080 TRDNQ13061 729 aa20.39■□□□□ 0.85
HDAC7-227ENST00000548080 SAMD1Q6SPF0 538 aaPredicted RBP20.39■□□□□ 0.85
HDAC7-227ENST00000548080 NOL8Q76FK4 1167 aaKnown RBP20.39■□□□□ 0.85
HDAC7-227ENST00000548080 SPRYD3Q8NCJ5 442 aa20.39■□□□□ 0.85
HDAC7-227ENST00000548080 TMX3Q96JJ7 454 aa20.39■□□□□ 0.85
HDAC7-227ENST00000548080 PARK7Q99497 189 aaKnown RBP20.39■□□□□ 0.85
HDAC7-227ENST00000548080 ZKSCAN3Q9BRR0 538 aa20.39■□□□□ 0.85
HDAC7-227ENST00000548080 RNF41Q9H4P4 317 aaPredicted RBP20.39■□□□□ 0.85
HDAC7-227ENST00000548080 RPAP3Q9H6T3 665 aaPredicted RBP20.39■□□□□ 0.85
HDAC7-227ENST00000548080 ZCCHC17Q9NP64 241 aaKnown RBP20.39■□□□□ 0.85
HDAC7-227ENST00000548080 LIMCH1Q9UPQ0 1083 aa20.39■□□□□ 0.85
HDAC7-227ENST00000548080 TLR2O60603 784 aa20.38■□□□□ 0.85
HDAC7-227ENST00000548080 KDM4AO75164 1064 aa20.38■□□□□ 0.85
HDAC7-227ENST00000548080 RALYLQ86SE5 291 aaKnown RBP20.38■□□□□ 0.85
HDAC7-227ENST00000548080 C12orf42Q96LP6 360 aa20.38■□□□□ 0.85
HDAC7-227ENST00000548080 VCPKMTQ9H867 229 aa20.38■□□□□ 0.85
HDAC7-227ENST00000548080 NYAP2Q9P242 653 aa20.38■□□□□ 0.85
HDAC7-227ENST00000548080 ADGRA2Q96PE1 1338 aa20.38■□□□□ 0.85
HDAC7-227ENST00000548080 HSP90AA1P07900 732 aaKnown RBP20.37■□□□□ 0.85
HDAC7-227ENST00000548080 IRX3P78415 501 aaPredicted RBP20.37■□□□□ 0.85
HDAC7-227ENST00000548080 CAP1Q01518 475 aa20.37■□□□□ 0.85
HDAC7-227ENST00000548080 RASGRP2Q7LDG7 609 aa20.37■□□□□ 0.85
HDAC7-227ENST00000548080 SMCR8Q8TEV9 937 aaPredicted RBP20.37■□□□□ 0.85
HDAC7-227ENST00000548080 TCEANC2Q96MN5 208 aa20.37■□□□□ 0.85
HDAC7-227ENST00000548080 NUP88Q99567 741 aaPredicted RBP20.37■□□□□ 0.85
HDAC7-227ENST00000548080 P2RX7Q99572 595 aaKnown RBP20.37■□□□□ 0.85
HDAC7-227ENST00000548080 SH2D4AQ9H788 454 aa20.37■□□□□ 0.85
HDAC7-227ENST00000548080 STX8Q9UNK0 236 aa20.37■□□□□ 0.85
HDAC7-227ENST00000548080 MTMR7Q9Y216 660 aa20.37■□□□□ 0.85
HDAC7-227ENST00000548080 FKTNO75072 461 aa20.37■□□□□ 0.85
HDAC7-227ENST00000548080 TTLL1O95922 423 aa20.37■□□□□ 0.85
HDAC7-227ENST00000548080 OSBPP22059 807 aa20.37■□□□□ 0.85
HDAC7-227ENST00000548080 PABPC4Q13310 644 aaKnown RBP eCLIP20.37■□□□□ 0.85
HDAC7-227ENST00000548080 COL13A1Q5TAT6 717 aaPredicted RBP20.37■□□□□ 0.85
HDAC7-227ENST00000548080 MB21D2Q8IYB1 491 aaPredicted RBP20.37■□□□□ 0.85
HDAC7-227ENST00000548080 CD99L2Q8TCZ2 262 aa20.37■□□□□ 0.85
HDAC7-227ENST00000548080 ZSCAN31Q96LW9 406 aaPredicted RBP20.37■□□□□ 0.85
HDAC7-227ENST00000548080 TANGO6Q9C0B7 1094 aa20.37■□□□□ 0.85
HDAC7-227ENST00000548080 CNNM2Q9H8M5 875 aa20.37■□□□□ 0.85
HDAC7-227ENST00000548080 SLC45A1Q9Y2W3 748 aa20.37■□□□□ 0.85
HDAC7-227ENST00000548080 MCM5P33992 734 aa20.36■□□□□ 0.85
HDAC7-227ENST00000548080 TOB2Q14106 344 aaPredicted RBP20.36■□□□□ 0.85
HDAC7-227ENST00000548080 Q6ZUG5 572 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms