RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 SHTN1A0MZ66 631 aa14.32□□□□□ -0.12
RAB5B-204ENST00000548068 PALM3A6NDB9 673 aaPredicted RBP14.32□□□□□ -0.12
RAB5B-204ENST00000548068 GRIN3BO60391 1043 aa14.32□□□□□ -0.12
RAB5B-204ENST00000548068 PPFIA3O75145 1194 aa14.32□□□□□ -0.12
RAB5B-204ENST00000548068 ICA1Q05084 483 aa14.32□□□□□ -0.12
RAB5B-204ENST00000548068 GNL2Q13823 731 aaKnown RBP14.32□□□□□ -0.12
RAB5B-204ENST00000548068 C9orf131Q5VYM1 1079 aa14.32□□□□□ -0.12
RAB5B-204ENST00000548068 KRT40Q6A162 431 aa14.32□□□□□ -0.12
RAB5B-204ENST00000548068 SAMD7Q7Z3H4 446 aa14.32□□□□□ -0.12
RAB5B-204ENST00000548068 SPZ1Q9BXG8 430 aa14.32□□□□□ -0.12
RAB5B-204ENST00000548068 TMEM39BQ9GZU3 492 aa14.32□□□□□ -0.12
RAB5B-204ENST00000548068 SCAND2PQ9GZW5 306 aaPredicted RBP14.32□□□□□ -0.12
RAB5B-204ENST00000548068 CLIP2Q9UDT6 1046 aa14.32□□□□□ -0.12
RAB5B-204ENST00000548068 MAD2L2Q9UI95 211 aa14.32□□□□□ -0.12
RAB5B-204ENST00000548068 PPP2R3BQ9Y5P8 575 aa14.32□□□□□ -0.12
RAB5B-204ENST00000548068 ATAD5Q96QE3 1844 aa14.31□□□□□ -0.12
RAB5B-204ENST00000548068 FAM196BA6NMK8 535 aa14.31□□□□□ -0.12
RAB5B-204ENST00000548068 GUCY1B3Q02153 619 aa14.31□□□□□ -0.12
RAB5B-204ENST00000548068 RASA3Q14644 834 aa14.31□□□□□ -0.12
RAB5B-204ENST00000548068 GPR162Q16538 588 aa14.31□□□□□ -0.12
RAB5B-204ENST00000548068 GPATCH4Q5T3I0 446 aaKnown RBP14.31□□□□□ -0.12
RAB5B-204ENST00000548068 DPY19L2Q6NUT2 758 aa14.31□□□□□ -0.12
RAB5B-204ENST00000548068 CCDC82Q8N4S0 544 aa14.31□□□□□ -0.12
RAB5B-204ENST00000548068 SRBD1Q8N5C6 995 aaKnown RBP14.31□□□□□ -0.12
RAB5B-204ENST00000548068 MKL1Q969V6 931 aa14.31□□□□□ -0.12
RAB5B-204ENST00000548068 BRMS1Q9HCU9 246 aa14.31□□□□□ -0.12
RAB5B-204ENST00000548068 GINM1Q9NU53 330 aa14.31□□□□□ -0.12
RAB5B-204ENST00000548068 HACL1Q9UJ83 578 aa14.31□□□□□ -0.12
RAB5B-204ENST00000548068 CFAP45Q9UL16 551 aa14.31□□□□□ -0.12
RAB5B-204ENST00000548068 KLRF2D3W0D1 207 aa14.3□□□□□ -0.12
RAB5B-204ENST00000548068 MBD3O95983 291 aa14.3□□□□□ -0.12
RAB5B-204ENST00000548068 SNHG28P0DPA3 235 aa14.3□□□□□ -0.12
RAB5B-204ENST00000548068 SCG2P13521 617 aa14.3□□□□□ -0.12
RAB5B-204ENST00000548068 ATP2B2Q01814 1243 aa14.3□□□□□ -0.12
RAB5B-204ENST00000548068 KIF23Q02241 960 aaPredicted RBP14.3□□□□□ -0.12
RAB5B-204ENST00000548068 MAP3K10Q02779 954 aa14.3□□□□□ -0.12
RAB5B-204ENST00000548068 DNM1Q05193 864 aaKnown RBP14.3□□□□□ -0.12
RAB5B-204ENST00000548068 FOXD4L6Q3SYB3 417 aaPredicted RBP14.3□□□□□ -0.12
RAB5B-204ENST00000548068 DCAF15Q66K64 600 aa14.3□□□□□ -0.12
RAB5B-204ENST00000548068 FOXD4L3Q6VB84 417 aaPredicted RBP14.3□□□□□ -0.12
RAB5B-204ENST00000548068 DCAF4Q8WV16 495 aa14.3□□□□□ -0.12
RAB5B-204ENST00000548068 SH2D4AQ9H788 454 aa14.3□□□□□ -0.12
RAB5B-204ENST00000548068 ARHGEF10LQ9HCE6 1279 aa14.3□□□□□ -0.12
RAB5B-204ENST00000548068 SH3GLB2Q9NR46 395 aa14.3□□□□□ -0.12
RAB5B-204ENST00000548068 LMBRD1Q9NUN5 540 aa14.3□□□□□ -0.12
RAB5B-204ENST00000548068 V9GY48 417 aaPredicted RBP14.3□□□□□ -0.12
RAB5B-204ENST00000548068 PITPNM2Q9BZ72 1349 aa14.3□□□□□ -0.12
RAB5B-204ENST00000548068 hCG_1984214I3L0E3 225 aa14.29□□□□□ -0.12
RAB5B-204ENST00000548068 TRAK2O60296 914 aa14.29□□□□□ -0.12
RAB5B-204ENST00000548068 PRPF40AO75400 957 aaKnown RBP14.29□□□□□ -0.12
RAB5B-204ENST00000548068 GDF11O95390 407 aa14.29□□□□□ -0.12
RAB5B-204ENST00000548068 EGFRP00533 1210 aa14.29□□□□□ -0.12
RAB5B-204ENST00000548068 GH2P01242 217 aa14.29□□□□□ -0.12
RAB5B-204ENST00000548068 MMP1P03956 469 aa14.29□□□□□ -0.12
RAB5B-204ENST00000548068 PDHBP11177 359 aa14.29□□□□□ -0.12
RAB5B-204ENST00000548068 EEF2P13639 858 aaKnown RBP14.29□□□□□ -0.12
RAB5B-204ENST00000548068 SEPT2Q15019 361 aa14.29□□□□□ -0.12
RAB5B-204ENST00000548068 PFKFB3Q16875 520 aaPredicted RBP14.29□□□□□ -0.12
RAB5B-204ENST00000548068 CMTR1Q8N1G2 835 aaKnown RBP14.29□□□□□ -0.12
RAB5B-204ENST00000548068 LRRC47Q8N1G4 583 aaKnown RBP14.29□□□□□ -0.12
RAB5B-204ENST00000548068 ZNF713Q8N859 430 aaPredicted RBP14.29□□□□□ -0.12
RAB5B-204ENST00000548068 AIFM3Q96NN9 605 aa14.29□□□□□ -0.12
RAB5B-204ENST00000548068 ADARB2Q9NS39 739 aaKnown RBP14.29□□□□□ -0.12
RAB5B-204ENST00000548068 SEC63Q9UGP8 760 aaKnown RBP14.29□□□□□ -0.12
RAB5B-204ENST00000548068 PGAP2Q9UHJ9 254 aa14.29□□□□□ -0.12
RAB5B-204ENST00000548068 MTMR7Q9Y216 660 aa14.29□□□□□ -0.12
RAB5B-204ENST00000548068 CNPY2Q9Y2B0 182 aa14.29□□□□□ -0.12
RAB5B-204ENST00000548068 ELP1O95163 1332 aa14.29□□□□□ -0.12
RAB5B-204ENST00000548068 FIBPO43427 364 aa14.28□□□□□ -0.12
RAB5B-204ENST00000548068 ASNSP08243 561 aa14.28□□□□□ -0.12
RAB5B-204ENST00000548068 U2AF2P26368 475 aaKnown RBP eCLIP14.28□□□□□ -0.127e-6■■□□□ 14.4
RAB5B-204ENST00000548068 CALML3P27482 149 aa14.28□□□□□ -0.12
RAB5B-204ENST00000548068 GUCY1A2P33402 732 aa14.28□□□□□ -0.12
RAB5B-204ENST00000548068 DOCK1Q14185 1865 aa14.28□□□□□ -0.12
RAB5B-204ENST00000548068 PKN1Q16512 942 aa14.28□□□□□ -0.12
RAB5B-204ENST00000548068 CCDC96Q2M329 555 aa14.28□□□□□ -0.12
RAB5B-204ENST00000548068 KLHL40Q2TBA0 621 aa14.28□□□□□ -0.12
RAB5B-204ENST00000548068 OTUD7BQ6GQQ9 843 aa14.28□□□□□ -0.12
RAB5B-204ENST00000548068 STAG2Q8N3U4 1231 aa14.28□□□□□ -0.12
RAB5B-204ENST00000548068 GMCL1P1Q8NEA9 526 aa14.28□□□□□ -0.12
RAB5B-204ENST00000548068 CCDC148Q8NFR7 591 aa14.28□□□□□ -0.12
RAB5B-204ENST00000548068 CCDC12Q8WUD4 166 aaPredicted RBP14.28□□□□□ -0.12
RAB5B-204ENST00000548068 RRP36Q96EU6 259 aaKnown RBP14.28□□□□□ -0.12
RAB5B-204ENST00000548068 DEFB129Q9H1M3 183 aa14.28□□□□□ -0.12
RAB5B-204ENST00000548068 FOXP1Q9H334 677 aaPredicted RBP14.28□□□□□ -0.12
RAB5B-204ENST00000548068 ZBTB21Q9ULJ3 1066 aa14.28□□□□□ -0.12
RAB5B-204ENST00000548068 DDX49Q9Y6V7 483 aaKnown RBP14.28□□□□□ -0.12
RAB5B-204ENST00000548068 SCN4AP35499 1836 aa14.27□□□□□ -0.12
RAB5B-204ENST00000548068 USP17L5A8MUK1 530 aa14.27□□□□□ -0.13
RAB5B-204ENST00000548068 DDNO94850 711 aaPredicted RBP14.27□□□□□ -0.13
RAB5B-204ENST00000548068 CAP2P40123 477 aa14.27□□□□□ -0.13
RAB5B-204ENST00000548068 EPS15P42566 896 aa14.27□□□□□ -0.13
RAB5B-204ENST00000548068 ZNF543Q08ER8 600 aa14.27□□□□□ -0.13
RAB5B-204ENST00000548068 ANGEL2Q5VTE6 544 aaKnown RBP14.27□□□□□ -0.13
RAB5B-204ENST00000548068 USP17L2Q6R6M4 530 aa14.27□□□□□ -0.13
RAB5B-204ENST00000548068 USP48Q86UV5 1035 aa14.27□□□□□ -0.13
RAB5B-204ENST00000548068 CLEC10AQ8IUN9 316 aa14.27□□□□□ -0.13
RAB5B-204ENST00000548068 TRPM4Q8TD43 1214 aa14.27□□□□□ -0.13
RAB5B-204ENST00000548068 L3MBTL3Q96JM7 780 aaPredicted RBP14.27□□□□□ -0.13
RAB5B-204ENST00000548068 SPATA32Q96LK8 384 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms