RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 HSPA1BP0DMV9 641 aaKnown RBP13.41□□□□□ -0.26
CALCOCO1-208ENST00000547988 ZKSCAN1P17029 563 aaPredicted RBP13.41□□□□□ -0.26
CALCOCO1-208ENST00000547988 HSPA4P34932 840 aa13.41□□□□□ -0.26
CALCOCO1-208ENST00000547988 TAF1CQ15572 869 aaPredicted RBP13.41□□□□□ -0.26
CALCOCO1-208ENST00000547988 TSGA10IPQ3SY00 556 aa13.41□□□□□ -0.26
CALCOCO1-208ENST00000547988 TREML2Q5T2D2 321 aa13.41□□□□□ -0.26
CALCOCO1-208ENST00000547988 STOX1Q6ZVD7 989 aa13.41□□□□□ -0.26
CALCOCO1-208ENST00000547988 TTC14Q96N46 770 aa13.41□□□□□ -0.26
CALCOCO1-208ENST00000547988 PARK7Q99497 189 aaKnown RBP13.41□□□□□ -0.26
CALCOCO1-208ENST00000547988 ZSWIM5Q9P217 1185 aa13.41□□□□□ -0.26
CALCOCO1-208ENST00000547988 CLIP2Q9UDT6 1046 aa13.41□□□□□ -0.26
CALCOCO1-208ENST00000547988 PNMA3Q9UL41 463 aa13.41□□□□□ -0.26
CALCOCO1-208ENST00000547988 STX8Q9UNK0 236 aa13.41□□□□□ -0.26
CALCOCO1-208ENST00000547988 TAF6LQ9Y6J9 622 aa13.41□□□□□ -0.26
CALCOCO1-208ENST00000547988 NMT2O60551 498 aa13.4□□□□□ -0.26
CALCOCO1-208ENST00000547988 VCAM1P19320 739 aa13.4□□□□□ -0.26
CALCOCO1-208ENST00000547988 HOXA7P31268 230 aaPredicted RBP13.4□□□□□ -0.26
CALCOCO1-208ENST00000547988 DGKZQ13574 1117 aa13.4□□□□□ -0.26
CALCOCO1-208ENST00000547988 KRT32Q14532 448 aa13.4□□□□□ -0.26
CALCOCO1-208ENST00000547988 GMCL1P1Q8NEA9 526 aa13.4□□□□□ -0.26
CALCOCO1-208ENST00000547988 NKX2-3Q8TAU0 364 aa13.4□□□□□ -0.26
CALCOCO1-208ENST00000547988 KCNB2Q92953 911 aa13.4□□□□□ -0.26
CALCOCO1-208ENST00000547988 UBAC1Q9BSL1 405 aa13.4□□□□□ -0.26
CALCOCO1-208ENST00000547988 USP26Q9BXU7 913 aa13.4□□□□□ -0.26
CALCOCO1-208ENST00000547988 ZFYVE28Q9HCC9 887 aa13.4□□□□□ -0.26
CALCOCO1-208ENST00000547988 ZNFX1Q9P2E3 1918 aaKnown RBP13.39□□□□□ -0.27
CALCOCO1-208ENST00000547988 DOCK3Q8IZD9 2030 aa13.39□□□□□ -0.27
CALCOCO1-208ENST00000547988 WDR46O15213 610 aaKnown RBP13.39□□□□□ -0.27
CALCOCO1-208ENST00000547988 TOP1P11387 765 aaKnown RBP13.39□□□□□ -0.27
CALCOCO1-208ENST00000547988 OSBPP22059 807 aa13.39□□□□□ -0.27
CALCOCO1-208ENST00000547988 MCCP23508 829 aa13.39□□□□□ -0.27
CALCOCO1-208ENST00000547988 CRHR2Q13324 411 aa13.39□□□□□ -0.27
CALCOCO1-208ENST00000547988 C8orf34Q49A92 452 aa13.39□□□□□ -0.27
CALCOCO1-208ENST00000547988 NOM1Q5C9Z4 860 aaKnown RBP13.39□□□□□ -0.27
CALCOCO1-208ENST00000547988 DGKHQ86XP1 1220 aa13.39□□□□□ -0.27
CALCOCO1-208ENST00000547988 MB21D2Q8IYB1 491 aaPredicted RBP13.39□□□□□ -0.27
CALCOCO1-208ENST00000547988 ZSCAN10Q96SZ4 725 aaPredicted RBP13.39□□□□□ -0.27
CALCOCO1-208ENST00000547988 MTA3Q9BTC8 594 aa13.39□□□□□ -0.27
CALCOCO1-208ENST00000547988 ZSWIM8A7E2V4 1837 aa13.39□□□□□ -0.27
CALCOCO1-208ENST00000547988 TNKSO95271 1327 aa13.39□□□□□ -0.27
CALCOCO1-208ENST00000547988 USP17L15C9J2P7 530 aa13.38□□□□□ -0.27
CALCOCO1-208ENST00000547988 USP17L13C9JLJ4 530 aa13.38□□□□□ -0.27
CALCOCO1-208ENST00000547988 USP17L11C9JVI0 530 aa13.38□□□□□ -0.27
CALCOCO1-208ENST00000547988 USP17L18D6R9N7 530 aa13.38□□□□□ -0.27
CALCOCO1-208ENST00000547988 USP17L22D6RA61 530 aa13.38□□□□□ -0.27
CALCOCO1-208ENST00000547988 USP17L17D6RBQ6 530 aa13.38□□□□□ -0.27
CALCOCO1-208ENST00000547988 USP17L19D6RCP7 530 aa13.38□□□□□ -0.27
CALCOCO1-208ENST00000547988 USP17L20D6RJB6 530 aa13.38□□□□□ -0.27
CALCOCO1-208ENST00000547988 F5H6K3 240 aa13.38□□□□□ -0.27
CALCOCO1-208ENST00000547988 MCM5P33992 734 aa13.38□□□□□ -0.27
CALCOCO1-208ENST00000547988 IRX3P78415 501 aaPredicted RBP13.38□□□□□ -0.27
CALCOCO1-208ENST00000547988 KLRC3Q07444 240 aa13.38□□□□□ -0.27
CALCOCO1-208ENST00000547988 USP17L24Q0WX57 530 aa13.38□□□□□ -0.27
CALCOCO1-208ENST00000547988 SART3Q15020 963 aaKnown RBP13.38□□□□□ -0.27
CALCOCO1-208ENST00000547988 KIAA1755Q5JYT7 1200 aa13.38□□□□□ -0.27
CALCOCO1-208ENST00000547988 RCSD1Q6JBY9 416 aa13.38□□□□□ -0.27
CALCOCO1-208ENST00000547988 CYB5R4Q7L1T6 521 aa13.38□□□□□ -0.27
CALCOCO1-208ENST00000547988 RASEFQ8IZ41 740 aa13.38□□□□□ -0.27
CALCOCO1-208ENST00000547988 LRRC47Q8N1G4 583 aaKnown RBP13.38□□□□□ -0.27
CALCOCO1-208ENST00000547988 ANKS1AQ92625 1134 aa13.38□□□□□ -0.27
CALCOCO1-208ENST00000547988 ZKSCAN3Q9BRR0 538 aa13.38□□□□□ -0.27
CALCOCO1-208ENST00000547988 ASCC2Q9H1I8 757 aaPredicted RBP13.38□□□□□ -0.27
CALCOCO1-208ENST00000547988 RPAP3Q9H6T3 665 aaPredicted RBP13.38□□□□□ -0.27
CALCOCO1-208ENST00000547988 PLXNB2O15031 1838 aa13.38□□□□□ -0.27
CALCOCO1-208ENST00000547988 ADGRA2Q96PE1 1338 aa13.38□□□□□ -0.27
CALCOCO1-208ENST00000547988 ERICH2A1L162 156 aa13.37□□□□□ -0.27
CALCOCO1-208ENST00000547988 FOXN1O15353 648 aa13.37□□□□□ -0.27
CALCOCO1-208ENST00000547988 RAD21O60216 631 aa13.37□□□□□ -0.27
CALCOCO1-208ENST00000547988 TLR2O60603 784 aa13.37□□□□□ -0.27
CALCOCO1-208ENST00000547988 TBC1D8O95759 1140 aa13.37□□□□□ -0.27
CALCOCO1-208ENST00000547988 NDUFB10O96000 172 aa13.37□□□□□ -0.27
CALCOCO1-208ENST00000547988 HMGB1P09429 215 aaKnown RBP13.37□□□□□ -0.27
CALCOCO1-208ENST00000547988 CTCFP49711 727 aaPredicted RBP13.37□□□□□ -0.27
CALCOCO1-208ENST00000547988 CATSPERGQ6ZRH7 1159 aa13.37□□□□□ -0.27
CALCOCO1-208ENST00000547988 SPICE1Q8N0Z3 855 aa13.37□□□□□ -0.27
CALCOCO1-208ENST00000547988 ENAHQ8N8S7 591 aaPredicted RBP13.37□□□□□ -0.27
CALCOCO1-208ENST00000547988 SMCR8Q8TEV9 937 aaPredicted RBP13.37□□□□□ -0.27
CALCOCO1-208ENST00000547988 GTF3C2Q8WUA4 911 aaPredicted RBP13.37□□□□□ -0.27
CALCOCO1-208ENST00000547988 NEK1Q96PY6 1258 aa13.37□□□□□ -0.27
CALCOCO1-208ENST00000547988 TMEM47Q9BQJ4 181 aa13.37□□□□□ -0.27
CALCOCO1-208ENST00000547988 TANGO6Q9C0B7 1094 aa13.37□□□□□ -0.27
CALCOCO1-208ENST00000547988 SNX14Q9Y5W7 946 aa13.37□□□□□ -0.27
CALCOCO1-208ENST00000547988 MYPNQ86TC9 1320 aa13.37□□□□□ -0.27
CALCOCO1-208ENST00000547988 WDR19Q8NEZ3 1342 aa13.37□□□□□ -0.27
CALCOCO1-208ENST00000547988 RBBP6Q7Z6E9 1792 aaKnown RBP13.36□□□□□ -0.27
CALCOCO1-208ENST00000547988 CYP2C8P10632 490 aa13.36□□□□□ -0.27
CALCOCO1-208ENST00000547988 HSPA8P11142 646 aaKnown RBP13.36□□□□□ -0.27
CALCOCO1-208ENST00000547988 GCLCP48506 637 aaPredicted RBP13.36□□□□□ -0.27
CALCOCO1-208ENST00000547988 SEC23AQ15436 765 aa13.36□□□□□ -0.27
CALCOCO1-208ENST00000547988 IFIT1BQ5T764 474 aaKnown RBP13.36□□□□□ -0.27
CALCOCO1-208ENST00000547988 SLFN13Q68D06 897 aa13.36□□□□□ -0.27
CALCOCO1-208ENST00000547988 GMCL1Q96IK5 515 aa13.36□□□□□ -0.27
CALCOCO1-208ENST00000547988 TMEM87BQ96K49 555 aa13.36□□□□□ -0.27
CALCOCO1-208ENST00000547988 IFIT3O14879 490 aaKnown RBP13.35□□□□□ -0.27
CALCOCO1-208ENST00000547988 PRC1O43663 620 aa13.35□□□□□ -0.27
CALCOCO1-208ENST00000547988 BMP3P12645 472 aa13.35□□□□□ -0.27
CALCOCO1-208ENST00000547988 ANTXR2P58335 489 aa13.35□□□□□ -0.27
CALCOCO1-208ENST00000547988 HERVK_113P62684 666 aa13.35□□□□□ -0.27
CALCOCO1-208ENST00000547988 COG2Q14746 738 aa13.35□□□□□ -0.27
CALCOCO1-208ENST00000547988 WTAPQ15007 396 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms