RNA–Protein interactions for RNA: ENST00000547951.1

USP44-204, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-204ENST00000547951 RNF113AO15541 343 aaKnown RBP25.74■■□□□ 1.71
USP44-204ENST00000547951 XRCC5P13010 732 aaKnown RBP25.74■■□□□ 1.71
USP44-204ENST00000547951 PRKAR2AP13861 404 aaKnown RBP25.74■■□□□ 1.71
USP44-204ENST00000547951 WDR78Q5VTH9 848 aa25.74■■□□□ 1.71
USP44-204ENST00000547951 STK11IPQ8N1F8 1099 aa25.74■■□□□ 1.71
USP44-204ENST00000547951 PI4K2BQ8TCG2 481 aa25.74■■□□□ 1.71
USP44-204ENST00000547951 TANGO6Q9C0B7 1094 aa25.74■■□□□ 1.71
USP44-204ENST00000547951 HMX1Q9NP08 348 aaPredicted RBP25.74■■□□□ 1.71
USP44-204ENST00000547951 APPBP2Q92624 585 aa25.73■■□□□ 1.71
USP44-204ENST00000547951 PAWRQ96IZ0 340 aaKnown RBP25.73■■□□□ 1.71
USP44-204ENST00000547951 YTHDC1Q96MU7 727 aaKnown RBP25.73■■□□□ 1.71
USP44-204ENST00000547951 EPB41L4AQ9HCS5 686 aaPredicted RBP25.73■■□□□ 1.71
USP44-204ENST00000547951 TMX2Q9Y320 296 aa25.73■■□□□ 1.71
USP44-204ENST00000547951 GREB1LQ9C091 1923 aaPredicted RBP25.73■■□□□ 1.71
USP44-204ENST00000547951 ZKSCAN1P17029 563 aaPredicted RBP25.72■■□□□ 1.71
USP44-204ENST00000547951 RGS2P41220 211 aa25.72■■□□□ 1.71
USP44-204ENST00000547951 MNX1P50219 401 aaPredicted RBP25.72■■□□□ 1.71
USP44-204ENST00000547951 CACNB2Q08289 660 aaPredicted RBP25.72■■□□□ 1.71
USP44-204ENST00000547951 AMOTL1Q8IY63 956 aa25.72■■□□□ 1.71
USP44-204ENST00000547951 DDRGK1Q96HY6 314 aa25.72■■□□□ 1.71
USP44-204ENST00000547951 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.72■■□□□ 1.71
USP44-204ENST00000547951 CWC22Q9HCG8 908 aaKnown RBP25.72■■□□□ 1.71
USP44-204ENST00000547951 FLRT1Q9NZU1 646 aa25.72■■□□□ 1.71
USP44-204ENST00000547951 EEF2P13639 858 aaKnown RBP25.71■■□□□ 1.71
USP44-204ENST00000547951 CCND3P30281 292 aaPredicted RBP25.71■■□□□ 1.71
USP44-204ENST00000547951 CCNA1P78396 465 aa25.71■■□□□ 1.71
USP44-204ENST00000547951 MAP2K5Q13163 448 aa25.71■■□□□ 1.71
USP44-204ENST00000547951 COG2Q14746 738 aa25.71■■□□□ 1.71
USP44-204ENST00000547951 CCDC17Q96LX7 622 aa25.71■■□□□ 1.71
USP44-204ENST00000547951 APBA2Q99767 749 aa25.71■■□□□ 1.71
USP44-204ENST00000547951 HTATIP2Q9BUP3 242 aa25.71■■□□□ 1.71
USP44-204ENST00000547951 ARHGEF10LQ9HCE6 1279 aa25.71■■□□□ 1.71
USP44-204ENST00000547951 GPAA1O43292 621 aa25.7■■□□□ 1.7
USP44-204ENST00000547951 PTPREP23469 700 aa25.7■■□□□ 1.7
USP44-204ENST00000547951 ATP2B2Q01814 1243 aa25.7■■□□□ 1.7
USP44-204ENST00000547951 SEC62Q99442 399 aaKnown RBP25.7■■□□□ 1.7
USP44-204ENST00000547951 MOV10L1Q9BXT6 1211 aaKnown RBP25.7■■□□□ 1.7
USP44-204ENST00000547951 VCPKMTQ9H867 229 aa25.7■■□□□ 1.7
USP44-204ENST00000547951 ARPP21Q9UBL0 812 aaPredicted RBP25.7■■□□□ 1.7
USP44-204ENST00000547951 TTC41PQ6P2S7 1318 aa25.69■■□□□ 1.7
USP44-204ENST00000547951 MINDY4BA8MYZ0 360 aa25.69■■□□□ 1.7
USP44-204ENST00000547951 SAMD1Q6SPF0 538 aaPredicted RBP25.69■■□□□ 1.7
USP44-204ENST00000547951 ATG4CQ96DT6 458 aa25.69■■□□□ 1.7
USP44-204ENST00000547951 COL11A1P12107 1806 aaPredicted RBP25.69■■□□□ 1.7
USP44-204ENST00000547951 SLC15A5A6NIM6 579 aa25.68■■□□□ 1.7
USP44-204ENST00000547951 RASA1P20936 1047 aa25.68■■□□□ 1.7
USP44-204ENST00000547951 DSG3P32926 999 aa25.68■■□□□ 1.7
USP44-204ENST00000547951 SBK1Q52WX2 424 aa25.68■■□□□ 1.7
USP44-204ENST00000547951 CHRDL2Q6WN34 429 aa25.68■■□□□ 1.7
USP44-204ENST00000547951 NPLOC4Q8TAT6 608 aa25.68■■□□□ 1.7
USP44-204ENST00000547951 LPAR1Q92633 364 aa25.68■■□□□ 1.7
USP44-204ENST00000547951 HOXC10Q9NYD6 342 aa25.68■■□□□ 1.7
USP44-204ENST00000547951 SALL3Q9BXA9 1300 aa25.67■■□□□ 1.7
USP44-204ENST00000547951 FLOT1O75955 427 aa25.67■■□□□ 1.7
USP44-204ENST00000547951 GRB14Q14449 540 aa25.67■■□□□ 1.7
USP44-204ENST00000547951 TRMT44Q8IYL2 757 aaKnown RBP25.67■■□□□ 1.7
USP44-204ENST00000547951 SPATC1LQ9H0A9 340 aa25.67■■□□□ 1.7
USP44-204ENST00000547951 FBXO28Q9NVF7 368 aa25.67■■□□□ 1.7
USP44-204ENST00000547951 OGDHLQ9ULD0 1010 aa25.67■■□□□ 1.7
USP44-204ENST00000547951 FRMPD3Q5JV73 1810 aa25.67■■□□□ 1.7
USP44-204ENST00000547951 ZFYP08048 801 aaPredicted RBP25.66■■□□□ 1.7
USP44-204ENST00000547951 MX1P20591 662 aa25.66■■□□□ 1.7
USP44-204ENST00000547951 NECAB2Q7Z6G3 386 aa25.66■■□□□ 1.7
USP44-204ENST00000547951 SH2D4AQ9H788 454 aa25.66■■□□□ 1.7
USP44-204ENST00000547951 KANSL2Q9H9L4 492 aa25.66■■□□□ 1.7
USP44-204ENST00000547951 ROBO3Q96MS0 1386 aa25.66■■□□□ 1.7
USP44-204ENST00000547951 GLRX3O76003 335 aaKnown RBP25.65■■□□□ 1.7
USP44-204ENST00000547951 ERCC3P19447 782 aa25.65■■□□□ 1.7
USP44-204ENST00000547951 LHX8Q68G74 356 aa25.65■■□□□ 1.7
USP44-204ENST00000547951 GIMAP6Q6P9H5 292 aa25.65■■□□□ 1.7
USP44-204ENST00000547951 IVNS1ABPQ9Y6Y0 642 aa25.65■■□□□ 1.7
USP44-204ENST00000547951 ZNF236Q9UL36 1845 aa25.65■■□□□ 1.7
USP44-204ENST00000547951 WDR46O15213 610 aaKnown RBP25.64■■□□□ 1.7
USP44-204ENST00000547951 PRDM1O75626 825 aa25.64■■□□□ 1.7
USP44-204ENST00000547951 FXR1P51114 621 aaKnown RBP eCLIP25.64■■□□□ 1.7
USP44-204ENST00000547951 PLS1Q14651 629 aa25.64■■□□□ 1.7
USP44-204ENST00000547951 ANKRD45Q5TZF3 282 aa25.64■■□□□ 1.7
USP44-204ENST00000547951 ANKLE1Q8NAG6 615 aa25.64■■□□□ 1.7
USP44-204ENST00000547951 FSD1Q9BTV5 496 aa25.64■■□□□ 1.7
USP44-204ENST00000547951 ERC2O15083 957 aa25.63■■□□□ 1.69
USP44-204ENST00000547951 RAD21O60216 631 aa25.63■■□□□ 1.69
USP44-204ENST00000547951 EVI5O60447 810 aa25.63■■□□□ 1.69
USP44-204ENST00000547951 APPP05067 770 aa25.63■■□□□ 1.69
USP44-204ENST00000547951 HOXC6P09630 235 aa25.63■■□□□ 1.69
USP44-204ENST00000547951 CAPN2P17655 700 aa25.63■■□□□ 1.69
USP44-204ENST00000547951 CYP2C19P33261 490 aa25.63■■□□□ 1.69
USP44-204ENST00000547951 TDO2P48775 406 aa25.63■■□□□ 1.69
USP44-204ENST00000547951 FAM83BQ5T0W9 1011 aa25.63■■□□□ 1.69
USP44-204ENST00000547951 NUP88Q99567 741 aaPredicted RBP25.63■■□□□ 1.69
USP44-204ENST00000547951 PCDH10Q9P2E7 1040 aa25.63■■□□□ 1.69
USP44-204ENST00000547951 RBM27Q9P2N5 1060 aaKnown RBP25.63■■□□□ 1.69
USP44-204ENST00000547951 IGHA2P01877 340 aa25.62■■□□□ 1.69
USP44-204ENST00000547951 ADORA2AP29274 412 aa25.62■■□□□ 1.69
USP44-204ENST00000547951 TMEM132BQ14DG7 1078 aa25.62■■□□□ 1.69
USP44-204ENST00000547951 ZMYM1Q5SVZ6 1142 aa25.62■■□□□ 1.69
USP44-204ENST00000547951 IFNL3Q8IZI9 196 aa25.62■■□□□ 1.69
USP44-204ENST00000547951 TRPV1Q8NER1 839 aa25.62■■□□□ 1.69
USP44-204ENST00000547951 MKNK2Q9HBH9 465 aa25.62■■□□□ 1.69
USP44-204ENST00000547951 NR2E3Q9Y5X4 410 aa25.62■■□□□ 1.69
USP44-204ENST00000547951 MYH4Q9Y623 1939 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms