RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 C9orf78Q9NZ63 289 aaPredicted RBP11.52□□□□□ -0.57
CDK4-205ENST00000547853 TMEM63CQ9P1W3 806 aa11.52□□□□□ -0.57
CDK4-205ENST00000547853 PLXNA1Q9UIW2 1896 aa11.52□□□□□ -0.57
CDK4-205ENST00000547853 TTC41PQ6P2S7 1318 aa11.52□□□□□ -0.57
CDK4-205ENST00000547853 RAD50Q92878 1312 aa11.52□□□□□ -0.57
CDK4-205ENST00000547853 TRANK1O15050 2925 aa11.52□□□□□ -0.57
CDK4-205ENST00000547853 XIRP2A4UGR9 3374 aa11.51□□□□□ -0.57
CDK4-205ENST00000547853 TRIM6-TRIM34B2RNG4 842 aa11.51□□□□□ -0.57
CDK4-205ENST00000547853 LDHBP07195 334 aaKnown RBP11.51□□□□□ -0.57
CDK4-205ENST00000547853 IFIT1P09914 478 aaKnown RBP11.51□□□□□ -0.57
CDK4-205ENST00000547853 RTP1P59025 263 aa11.51□□□□□ -0.57
CDK4-205ENST00000547853 SPP2Q13103 211 aa11.51□□□□□ -0.57
CDK4-205ENST00000547853 PABPC4Q13310 644 aaKnown RBP eCLIP11.51□□□□□ -0.57
CDK4-205ENST00000547853 POLA2Q14181 598 aa11.51□□□□□ -0.57
CDK4-205ENST00000547853 CCDC183Q5T5S1 534 aa11.51□□□□□ -0.57
CDK4-205ENST00000547853 ZSCAN29Q8IWY8 852 aaPredicted RBP11.51□□□□□ -0.57
CDK4-205ENST00000547853 TRMT44Q8IYL2 757 aaKnown RBP11.51□□□□□ -0.57
CDK4-205ENST00000547853 ZNF280CQ8ND82 737 aa11.51□□□□□ -0.57
CDK4-205ENST00000547853 FAM122AQ96E09 287 aa11.51□□□□□ -0.57
CDK4-205ENST00000547853 ZSCAN31Q96LW9 406 aaPredicted RBP11.51□□□□□ -0.57
CDK4-205ENST00000547853 MUC6Q6W4X9 2439 aa11.5□□□□□ -0.57
CDK4-205ENST00000547853 SYCE3A1L190 88 aa11.5□□□□□ -0.57
CDK4-205ENST00000547853 APBB1O00213 710 aa11.5□□□□□ -0.57
CDK4-205ENST00000547853 ATN1P54259 1190 aaPredicted RBP11.5□□□□□ -0.57
CDK4-205ENST00000547853 PKP1Q13835 747 aa11.5□□□□□ -0.57
CDK4-205ENST00000547853 SH3D19Q5HYK7 790 aa11.5□□□□□ -0.57
CDK4-205ENST00000547853 MORN1Q5T089 497 aa11.5□□□□□ -0.57
CDK4-205ENST00000547853 SASS6Q6UVJ0 657 aa11.5□□□□□ -0.57
CDK4-205ENST00000547853 GPATCH3Q96I76 525 aa11.5□□□□□ -0.57
CDK4-205ENST00000547853 SENP6Q9GZR1 1112 aaPredicted RBP11.5□□□□□ -0.57
CDK4-205ENST00000547853 PORCNQ9H237 461 aa11.5□□□□□ -0.57
CDK4-205ENST00000547853 SH2B1Q9NRF2 756 aaPredicted RBP11.5□□□□□ -0.57
CDK4-205ENST00000547853 EXOC6BQ9Y2D4 811 aa11.5□□□□□ -0.57
CDK4-205ENST00000547853 TCF20Q9UGU0 1960 aaKnown RBP11.5□□□□□ -0.57
CDK4-205ENST00000547853 HIP1O00291 1037 aa11.49□□□□□ -0.57
CDK4-205ENST00000547853 DNM1LO00429 736 aa11.49□□□□□ -0.57
CDK4-205ENST00000547853 SGSM2O43147 1006 aa11.49□□□□□ -0.57
CDK4-205ENST00000547853 TBC1D12O60347 775 aa11.49□□□□□ -0.57
CDK4-205ENST00000547853 SLC5A1P13866 664 aa11.49□□□□□ -0.57
CDK4-205ENST00000547853 RGS2P41220 211 aa11.49□□□□□ -0.57
CDK4-205ENST00000547853 UBE2HP62256 183 aa11.49□□□□□ -0.57
CDK4-205ENST00000547853 HMGN5P82970 282 aaKnown RBP11.49□□□□□ -0.57
CDK4-205ENST00000547853 PICALMQ13492 652 aa11.49□□□□□ -0.57
CDK4-205ENST00000547853 RRP1BQ14684 758 aaKnown RBP11.49□□□□□ -0.57
CDK4-205ENST00000547853 SNX17Q15036 470 aa11.49□□□□□ -0.57
CDK4-205ENST00000547853 POTEEQ6S8J3 1075 aa11.49□□□□□ -0.57
CDK4-205ENST00000547853 ERC1Q8IUD2 1116 aa11.49□□□□□ -0.57
CDK4-205ENST00000547853 RILPL2Q969X0 211 aa11.49□□□□□ -0.57
CDK4-205ENST00000547853 TM6SF1Q9BZW5 370 aa11.49□□□□□ -0.57
CDK4-205ENST00000547853 OSBPL5Q9H0X9 879 aaPredicted RBP11.49□□□□□ -0.57
CDK4-205ENST00000547853 PRKAG2Q9UGJ0 569 aa11.49□□□□□ -0.57
CDK4-205ENST00000547853 GLRX3O76003 335 aaKnown RBP11.48□□□□□ -0.57
CDK4-205ENST00000547853 PTMAP06454 111 aaKnown RBP11.48□□□□□ -0.57
CDK4-205ENST00000547853 MAPK4P31152 587 aa11.48□□□□□ -0.57
CDK4-205ENST00000547853 HERVK_113P62684 666 aa11.48□□□□□ -0.57
CDK4-205ENST00000547853 IRX3P78415 501 aaPredicted RBP11.48□□□□□ -0.57
CDK4-205ENST00000547853 MAP3K12Q12852 859 aa11.48□□□□□ -0.57
CDK4-205ENST00000547853 MTMR2Q13614 643 aa11.48□□□□□ -0.57
CDK4-205ENST00000547853 GPR142Q7Z601 462 aa11.48□□□□□ -0.57
CDK4-205ENST00000547853 GPRC5AQ8NFJ5 357 aa11.48□□□□□ -0.57
CDK4-205ENST00000547853 LPIN2Q92539 896 aa11.48□□□□□ -0.57
CDK4-205ENST00000547853 BADQ92934 168 aa11.48□□□□□ -0.57
CDK4-205ENST00000547853 PRIMPOLQ96LW4 560 aa11.48□□□□□ -0.57
CDK4-205ENST00000547853 PDLIM7Q9NR12 457 aa11.48□□□□□ -0.57
CDK4-205ENST00000547853 FLRT1Q9NZU1 646 aa11.48□□□□□ -0.57
CDK4-205ENST00000547853 DDX20Q9UHI6 824 aaKnown RBP11.48□□□□□ -0.57
CDK4-205ENST00000547853 LIMCH1Q9UPQ0 1083 aa11.48□□□□□ -0.57
CDK4-205ENST00000547853 ATP11BQ9Y2G3 1177 aa11.48□□□□□ -0.57
CDK4-205ENST00000547853 PARP14Q460N5 1801 aa11.48□□□□□ -0.57
CDK4-205ENST00000547853 MROH7-TTC4A0A0A0MT08 1334 aa11.47□□□□□ -0.57
CDK4-205ENST00000547853 SYNGAP1Q96PV0 1343 aa11.47□□□□□ -0.57
CDK4-205ENST00000547853 PNMA6EA0A0J9YXQ4 647 aa11.47□□□□□ -0.57
CDK4-205ENST00000547853 ZSCAN22P10073 491 aaPredicted RBP11.47□□□□□ -0.57
CDK4-205ENST00000547853 HOXA7P31268 230 aaPredicted RBP11.47□□□□□ -0.57
CDK4-205ENST00000547853 BTDP43251 543 aa11.47□□□□□ -0.57
CDK4-205ENST00000547853 RHBDL3P58872 404 aa11.47□□□□□ -0.57
CDK4-205ENST00000547853 ERVK-9P63128 1117 aa11.47□□□□□ -0.57
CDK4-205ENST00000547853 ERVK-24P63145 666 aa11.47□□□□□ -0.57
CDK4-205ENST00000547853 MTX1Q13505 466 aa11.47□□□□□ -0.57
CDK4-205ENST00000547853 GRIN2CQ14957 1233 aa11.47□□□□□ -0.57
CDK4-205ENST00000547853 RHPN1Q8TCX5 695 aa11.47□□□□□ -0.57
CDK4-205ENST00000547853 ADAMTS19Q8TE59 1207 aa11.47□□□□□ -0.57
CDK4-205ENST00000547853 LPAR1Q92633 364 aa11.47□□□□□ -0.57
CDK4-205ENST00000547853 USP44Q9H0E7 712 aa11.47□□□□□ -0.57
CDK4-205ENST00000547853 PRDM5Q9NQX1 630 aaPredicted RBP11.47□□□□□ -0.57
CDK4-205ENST00000547853 MYO5AQ9Y4I1 1855 aaKnown RBP11.46□□□□□ -0.57
CDK4-205ENST00000547853 CCDC171Q6TFL3 1326 aa11.46□□□□□ -0.57
CDK4-205ENST00000547853 USP17L5A8MUK1 530 aa11.46□□□□□ -0.57
CDK4-205ENST00000547853 EYA2O00167 538 aa11.46□□□□□ -0.57
CDK4-205ENST00000547853 SEMA3EO15041 775 aa11.46□□□□□ -0.57
CDK4-205ENST00000547853 ZBTB22O15209 634 aa11.46□□□□□ -0.57
CDK4-205ENST00000547853 NPM3O75607 178 aaKnown RBP11.46□□□□□ -0.57
CDK4-205ENST00000547853 CAP2P40123 477 aa11.46□□□□□ -0.57
CDK4-205ENST00000547853 PHKA1P46020 1223 aa11.46□□□□□ -0.57
CDK4-205ENST00000547853 RFX5P48382 616 aaPredicted RBP11.46□□□□□ -0.57
CDK4-205ENST00000547853 MAP2K5Q13163 448 aa11.46□□□□□ -0.57
CDK4-205ENST00000547853 TRIM60Q495X7 471 aa11.46□□□□□ -0.57
CDK4-205ENST00000547853 ATG9AQ7Z3C6 839 aa11.46□□□□□ -0.57
CDK4-205ENST00000547853 PLEKHH3Q7Z736 793 aa11.46□□□□□ -0.57
CDK4-205ENST00000547853 DZIP1Q86YF9 867 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms