RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 NMT2O60551 498 aa16.19■□□□□ 0.18
PTCH1-213ENST00000546820 TRPA1O75762 1119 aa16.19■□□□□ 0.18
PTCH1-213ENST00000546820 TOP1P11387 765 aaKnown RBP16.19■□□□□ 0.18
PTCH1-213ENST00000546820 PSMA5P28066 241 aa16.19■□□□□ 0.18
PTCH1-213ENST00000546820 KLRC3Q07444 240 aa16.19■□□□□ 0.18
PTCH1-213ENST00000546820 MOGSQ13724 837 aa16.19■□□□□ 0.18
PTCH1-213ENST00000546820 C8orf34Q49A92 452 aa16.19■□□□□ 0.18
PTCH1-213ENST00000546820 GPAT2Q6NUI2 795 aa16.19■□□□□ 0.18
PTCH1-213ENST00000546820 STOX1Q6ZVD7 989 aa16.19■□□□□ 0.18
PTCH1-213ENST00000546820 CLEC10AQ8IUN9 316 aa16.19■□□□□ 0.18
PTCH1-213ENST00000546820 FAM43AQ8N2R8 423 aa16.19■□□□□ 0.18
PTCH1-213ENST00000546820 ZKSCAN3Q9BRR0 538 aa16.19■□□□□ 0.18
PTCH1-213ENST00000546820 MTA3Q9BTC8 594 aa16.19■□□□□ 0.18
PTCH1-213ENST00000546820 ZFYVE28Q9HCC9 887 aa16.19■□□□□ 0.18
PTCH1-213ENST00000546820 RNF186Q9NXI6 227 aa16.19■□□□□ 0.18
PTCH1-213ENST00000546820 TAF6LQ9Y6J9 622 aa16.19■□□□□ 0.18
PTCH1-213ENST00000546820 USP17L15C9J2P7 530 aa16.18■□□□□ 0.18
PTCH1-213ENST00000546820 USP17L13C9JLJ4 530 aa16.18■□□□□ 0.18
PTCH1-213ENST00000546820 USP17L11C9JVI0 530 aa16.18■□□□□ 0.18
PTCH1-213ENST00000546820 USP17L18D6R9N7 530 aa16.18■□□□□ 0.18
PTCH1-213ENST00000546820 USP17L22D6RA61 530 aa16.18■□□□□ 0.18
PTCH1-213ENST00000546820 USP17L17D6RBQ6 530 aa16.18■□□□□ 0.18
PTCH1-213ENST00000546820 USP17L19D6RCP7 530 aa16.18■□□□□ 0.18
PTCH1-213ENST00000546820 USP17L20D6RJB6 530 aa16.18■□□□□ 0.18
PTCH1-213ENST00000546820 IFIT3O14879 490 aaKnown RBP16.18■□□□□ 0.18
PTCH1-213ENST00000546820 HOXA7P31268 230 aaPredicted RBP16.18■□□□□ 0.18
PTCH1-213ENST00000546820 NOVP48745 357 aa16.18■□□□□ 0.18
PTCH1-213ENST00000546820 USP17L24Q0WX57 530 aa16.18■□□□□ 0.18
PTCH1-213ENST00000546820 TAF1CQ15572 869 aaPredicted RBP16.18■□□□□ 0.18
PTCH1-213ENST00000546820 RASEFQ8IZ41 740 aa16.18■□□□□ 0.18
PTCH1-213ENST00000546820 TMTC2Q8N394 836 aa16.18■□□□□ 0.18
PTCH1-213ENST00000546820 GMCL1P1Q8NEA9 526 aa16.18■□□□□ 0.18
PTCH1-213ENST00000546820 VCAM1P19320 739 aa16.17■□□□□ 0.18
PTCH1-213ENST00000546820 IRX3P78415 501 aaPredicted RBP16.17■□□□□ 0.18
PTCH1-213ENST00000546820 TREML2Q5T2D2 321 aa16.17■□□□□ 0.18
PTCH1-213ENST00000546820 IFIT1BQ5T764 474 aaKnown RBP16.17■□□□□ 0.18
PTCH1-213ENST00000546820 SLFN13Q68D06 897 aa16.17■□□□□ 0.18
PTCH1-213ENST00000546820 CYB5R4Q7L1T6 521 aa16.17■□□□□ 0.18
PTCH1-213ENST00000546820 MB21D2Q8IYB1 491 aaPredicted RBP16.17■□□□□ 0.18
PTCH1-213ENST00000546820 ANKS1AQ92625 1134 aa16.17■□□□□ 0.18
PTCH1-213ENST00000546820 TMEM87BQ96K49 555 aa16.17■□□□□ 0.18
PTCH1-213ENST00000546820 PARK7Q99497 189 aaKnown RBP16.17■□□□□ 0.18
PTCH1-213ENST00000546820 TMEM47Q9BQJ4 181 aa16.17■□□□□ 0.18
PTCH1-213ENST00000546820 KAT14Q9H8E8 782 aa16.17■□□□□ 0.18
PTCH1-213ENST00000546820 UPF2Q9HAU5 1272 aaKnown RBP16.17■□□□□ 0.18
PTCH1-213ENST00000546820 SNX14Q9Y5W7 946 aa16.17■□□□□ 0.18
PTCH1-213ENST00000546820 TNKSO95271 1327 aa16.17■□□□□ 0.18
PTCH1-213ENST00000546820 GREB1LQ9C091 1923 aaPredicted RBP16.16■□□□□ 0.18
PTCH1-213ENST00000546820 WDR46O15213 610 aaKnown RBP16.16■□□□□ 0.18
PTCH1-213ENST00000546820 PRC1O43663 620 aa16.16■□□□□ 0.18
PTCH1-213ENST00000546820 CATSPERGQ6ZRH7 1159 aa16.16■□□□□ 0.18
PTCH1-213ENST00000546820 DHX32Q7L7V1 743 aaKnown RBP16.16■□□□□ 0.18
PTCH1-213ENST00000546820 SPICE1Q8N0Z3 855 aa16.16■□□□□ 0.18
PTCH1-213ENST00000546820 LRRC47Q8N1G4 583 aaKnown RBP16.16■□□□□ 0.18
PTCH1-213ENST00000546820 CFHR5Q9BXR6 569 aa16.16■□□□□ 0.18
PTCH1-213ENST00000546820 RPAP3Q9H6T3 665 aaPredicted RBP16.16■□□□□ 0.18
PTCH1-213ENST00000546820 HOXC10Q9NYD6 342 aa16.16■□□□□ 0.18
PTCH1-213ENST00000546820 THSD7BQ9C0I4 1608 aa16.16■□□□□ 0.18
PTCH1-213ENST00000546820 SEC24BO95487 1268 aa16.15■□□□□ 0.18
PTCH1-213ENST00000546820 TBC1D8O95759 1140 aa16.15■□□□□ 0.18
PTCH1-213ENST00000546820 NDUFB10O96000 172 aa16.15■□□□□ 0.18
PTCH1-213ENST00000546820 SLC1A4P43007 532 aa16.15■□□□□ 0.18
PTCH1-213ENST00000546820 ANAPC15P60006 121 aa16.15■□□□□ 0.18
PTCH1-213ENST00000546820 DGKZQ13574 1117 aa16.15■□□□□ 0.18
PTCH1-213ENST00000546820 COG2Q14746 738 aa16.15■□□□□ 0.18
PTCH1-213ENST00000546820 WTAPQ15007 396 aa16.15■□□□□ 0.18
PTCH1-213ENST00000546820 TMEM67Q5HYA8 995 aa16.15■□□□□ 0.18
PTCH1-213ENST00000546820 RCSD1Q6JBY9 416 aa16.15■□□□□ 0.18
PTCH1-213ENST00000546820 BLOC1S2Q6QNY1 142 aa16.15■□□□□ 0.18
PTCH1-213ENST00000546820 CHST3Q7LGC8 479 aa16.15■□□□□ 0.18
PTCH1-213ENST00000546820 ENAHQ8N8S7 591 aaPredicted RBP16.15■□□□□ 0.18
PTCH1-213ENST00000546820 NKX2-3Q8TAU0 364 aa16.15■□□□□ 0.18
PTCH1-213ENST00000546820 SMCR8Q8TEV9 937 aaPredicted RBP16.15■□□□□ 0.18
PTCH1-213ENST00000546820 GTF3C2Q8WUA4 911 aaPredicted RBP16.15■□□□□ 0.18
PTCH1-213ENST00000546820 GMCL1Q96IK5 515 aa16.15■□□□□ 0.18
PTCH1-213ENST00000546820 JAKMIP1Q96N16 626 aaKnown RBP16.15■□□□□ 0.18
PTCH1-213ENST00000546820 TANGO6Q9C0B7 1094 aa16.15■□□□□ 0.18
PTCH1-213ENST00000546820 ASCC2Q9H1I8 757 aaPredicted RBP16.15■□□□□ 0.18
PTCH1-213ENST00000546820 WDR19Q8NEZ3 1342 aa16.15■□□□□ 0.18
PTCH1-213ENST00000546820 PTPRFP10586 1907 aa16.14■□□□□ 0.17
PTCH1-213ENST00000546820 TLR2O60603 784 aa16.14■□□□□ 0.17
PTCH1-213ENST00000546820 HSPA1AP0DMV8 641 aaKnown RBP16.14■□□□□ 0.17
PTCH1-213ENST00000546820 HSPA1BP0DMV9 641 aaKnown RBP16.14■□□□□ 0.17
PTCH1-213ENST00000546820 BMP3P12645 472 aa16.14■□□□□ 0.17
PTCH1-213ENST00000546820 GCLCP48506 637 aaPredicted RBP16.14■□□□□ 0.17
PTCH1-213ENST00000546820 FGD1P98174 961 aa16.14■□□□□ 0.17
PTCH1-213ENST00000546820 CRHR2Q13324 411 aa16.14■□□□□ 0.17
PTCH1-213ENST00000546820 ADCK5Q3MIX3 580 aa16.14■□□□□ 0.17
PTCH1-213ENST00000546820 IGDCC4Q8TDY8 1250 aa16.14■□□□□ 0.17
PTCH1-213ENST00000546820 DCAF4Q8WV16 495 aa16.14■□□□□ 0.17
PTCH1-213ENST00000546820 TM6SF1Q9BZW5 370 aa16.14■□□□□ 0.17
PTCH1-213ENST00000546820 ISY1Q9ULR0 285 aaKnown RBP16.14■□□□□ 0.17
PTCH1-213ENST00000546820 MYH4Q9Y623 1939 aa16.13■□□□□ 0.17
PTCH1-213ENST00000546820 CYP2C8P10632 490 aa16.13■□□□□ 0.17
PTCH1-213ENST00000546820 CTCFP49711 727 aaPredicted RBP16.13■□□□□ 0.17
PTCH1-213ENST00000546820 ANTXR2P58335 489 aa16.13■□□□□ 0.17
PTCH1-213ENST00000546820 SEC23AQ15436 765 aa16.13■□□□□ 0.17
PTCH1-213ENST00000546820 KIAA1755Q5JYT7 1200 aa16.13■□□□□ 0.17
PTCH1-213ENST00000546820 FAM83BQ5T0W9 1011 aa16.13■□□□□ 0.17
PTCH1-213ENST00000546820 NFXL1Q6ZNB6 911 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms