RNA–Protein interactions for RNA: ENST00000546592.1

GPN3-204, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 638 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-204ENST00000546592 PNMA3Q9UL41 463 aa22.73■■□□□ 1.23
GPN3-204ENST00000546592 RAD21O60216 631 aa22.72■■□□□ 1.23
GPN3-204ENST00000546592 TRPA1O75762 1119 aa22.72■■□□□ 1.23
GPN3-204ENST00000546592 OSBPP22059 807 aa22.72■■□□□ 1.23
GPN3-204ENST00000546592 NOVP48745 357 aa22.72■■□□□ 1.23
GPN3-204ENST00000546592 DGKZQ13574 1117 aa22.72■■□□□ 1.23
GPN3-204ENST00000546592 SART3Q15020 963 aaKnown RBP22.72■■□□□ 1.23
GPN3-204ENST00000546592 TAF1CQ15572 869 aaPredicted RBP22.72■■□□□ 1.23
GPN3-204ENST00000546592 DGKHQ86XP1 1220 aa22.72■■□□□ 1.23
GPN3-204ENST00000546592 KCNB2Q92953 911 aa22.72■■□□□ 1.23
GPN3-204ENST00000546592 ZSCAN10Q96SZ4 725 aaPredicted RBP22.72■■□□□ 1.23
GPN3-204ENST00000546592 ZKSCAN3Q9BRR0 538 aa22.72■■□□□ 1.23
GPN3-204ENST00000546592 ERICH2A1L162 156 aa22.71■■□□□ 1.23
GPN3-204ENST00000546592 TOP1P11387 765 aaKnown RBP22.71■■□□□ 1.23
GPN3-204ENST00000546592 VCAM1P19320 739 aa22.71■■□□□ 1.23
GPN3-204ENST00000546592 TREML2Q5T2D2 321 aa22.71■■□□□ 1.23
GPN3-204ENST00000546592 CYB5R4Q7L1T6 521 aa22.71■■□□□ 1.23
GPN3-204ENST00000546592 RASEFQ8IZ41 740 aa22.71■■□□□ 1.23
GPN3-204ENST00000546592 LRRC47Q8N1G4 583 aaKnown RBP22.71■■□□□ 1.23
GPN3-204ENST00000546592 NKX2-3Q8TAU0 364 aa22.71■■□□□ 1.23
GPN3-204ENST00000546592 PARK7Q99497 189 aaKnown RBP22.71■■□□□ 1.23
GPN3-204ENST00000546592 ZFYVE28Q9HCC9 887 aa22.71■■□□□ 1.23
GPN3-204ENST00000546592 LOC285556D6RIA3 1793 aa22.71■■□□□ 1.23
GPN3-204ENST00000546592 USP17L15C9J2P7 530 aa22.7■■□□□ 1.22
GPN3-204ENST00000546592 USP17L13C9JLJ4 530 aa22.7■■□□□ 1.22
GPN3-204ENST00000546592 USP17L11C9JVI0 530 aa22.7■■□□□ 1.22
GPN3-204ENST00000546592 USP17L18D6R9N7 530 aa22.7■■□□□ 1.22
GPN3-204ENST00000546592 USP17L22D6RA61 530 aa22.7■■□□□ 1.22
GPN3-204ENST00000546592 USP17L17D6RBQ6 530 aa22.7■■□□□ 1.22
GPN3-204ENST00000546592 USP17L19D6RCP7 530 aa22.7■■□□□ 1.22
GPN3-204ENST00000546592 USP17L20D6RJB6 530 aa22.7■■□□□ 1.22
GPN3-204ENST00000546592 F5H6K3 240 aa22.7■■□□□ 1.22
GPN3-204ENST00000546592 HOXA7P31268 230 aaPredicted RBP22.7■■□□□ 1.22
GPN3-204ENST00000546592 MCM5P33992 734 aa22.7■■□□□ 1.22
GPN3-204ENST00000546592 IRX3P78415 501 aaPredicted RBP22.7■■□□□ 1.22
GPN3-204ENST00000546592 KLRC3Q07444 240 aa22.7■■□□□ 1.22
GPN3-204ENST00000546592 USP17L24Q0WX57 530 aa22.7■■□□□ 1.22
GPN3-204ENST00000546592 MB21D2Q8IYB1 491 aaPredicted RBP22.7■■□□□ 1.22
GPN3-204ENST00000546592 GMCL1P1Q8NEA9 526 aa22.7■■□□□ 1.22
GPN3-204ENST00000546592 NEK1Q96PY6 1258 aa22.7■■□□□ 1.22
GPN3-204ENST00000546592 TNKSO95271 1327 aa22.7■■□□□ 1.22
GPN3-204ENST00000546592 CEP350Q5VT06 3117 aa22.7■■□□□ 1.22
GPN3-204ENST00000546592 WDR46O15213 610 aaKnown RBP22.69■■□□□ 1.22
GPN3-204ENST00000546592 HMGB1P09429 215 aaKnown RBP22.69■■□□□ 1.22
GPN3-204ENST00000546592 HSPA1AP0DMV8 641 aaKnown RBP22.69■■□□□ 1.22
GPN3-204ENST00000546592 HSPA1BP0DMV9 641 aaKnown RBP22.69■■□□□ 1.22
GPN3-204ENST00000546592 SPICE1Q8N0Z3 855 aa22.69■■□□□ 1.22
GPN3-204ENST00000546592 MTA3Q9BTC8 594 aa22.69■■□□□ 1.22
GPN3-204ENST00000546592 CFHR5Q9BXR6 569 aa22.69■■□□□ 1.22
GPN3-204ENST00000546592 RPAP3Q9H6T3 665 aaPredicted RBP22.69■■□□□ 1.22
GPN3-204ENST00000546592 SNX14Q9Y5W7 946 aa22.69■■□□□ 1.22
GPN3-204ENST00000546592 IFIT3O14879 490 aaKnown RBP22.68■■□□□ 1.22
GPN3-204ENST00000546592 NDUFB10O96000 172 aa22.68■■□□□ 1.22
GPN3-204ENST00000546592 SLFN13Q68D06 897 aa22.68■■□□□ 1.22
GPN3-204ENST00000546592 ENAHQ8N8S7 591 aaPredicted RBP22.68■■□□□ 1.22
GPN3-204ENST00000546592 ANKS1AQ92625 1134 aa22.68■■□□□ 1.22
GPN3-204ENST00000546592 TMEM47Q9BQJ4 181 aa22.68■■□□□ 1.22
GPN3-204ENST00000546592 KAT14Q9H8E8 782 aa22.68■■□□□ 1.22
GPN3-204ENST00000546592 MYH4Q9Y623 1939 aa22.67■■□□□ 1.22
GPN3-204ENST00000546592 PRC1O43663 620 aa22.67■■□□□ 1.22
GPN3-204ENST00000546592 TBC1D8O95759 1140 aa22.67■■□□□ 1.22
GPN3-204ENST00000546592 PSMA5P28066 241 aa22.67■■□□□ 1.22
GPN3-204ENST00000546592 CRHR2Q13324 411 aa22.67■■□□□ 1.22
GPN3-204ENST00000546592 IFIT1BQ5T764 474 aaKnown RBP22.67■■□□□ 1.22
GPN3-204ENST00000546592 RCSD1Q6JBY9 416 aa22.67■■□□□ 1.22
GPN3-204ENST00000546592 SMCR8Q8TEV9 937 aaPredicted RBP22.67■■□□□ 1.22
GPN3-204ENST00000546592 TMEM87BQ96K49 555 aa22.67■■□□□ 1.22
GPN3-204ENST00000546592 TANGO6Q9C0B7 1094 aa22.67■■□□□ 1.22
GPN3-204ENST00000546592 ASCC2Q9H1I8 757 aaPredicted RBP22.67■■□□□ 1.22
GPN3-204ENST00000546592 SEC24BO95487 1268 aa22.66■■□□□ 1.22
GPN3-204ENST00000546592 WTAPQ15007 396 aa22.66■■□□□ 1.22
GPN3-204ENST00000546592 TMEM67Q5HYA8 995 aa22.66■■□□□ 1.22
GPN3-204ENST00000546592 KIAA1755Q5JYT7 1200 aa22.66■■□□□ 1.22
GPN3-204ENST00000546592 CATSPERGQ6ZRH7 1159 aa22.66■■□□□ 1.22
GPN3-204ENST00000546592 CHST3Q7LGC8 479 aa22.66■■□□□ 1.22
GPN3-204ENST00000546592 JAKMIP1Q96N16 626 aaKnown RBP22.66■■□□□ 1.22
GPN3-204ENST00000546592 CYP2C8P10632 490 aa22.65■■□□□ 1.22
GPN3-204ENST00000546592 ANTXR2P58335 489 aa22.65■■□□□ 1.22
GPN3-204ENST00000546592 SEC23AQ15436 765 aa22.65■■□□□ 1.22
GPN3-204ENST00000546592 ADCK5Q3MIX3 580 aa22.65■■□□□ 1.22
GPN3-204ENST00000546592 DHX32Q7L7V1 743 aaKnown RBP22.65■■□□□ 1.22
GPN3-204ENST00000546592 GMCL1Q96IK5 515 aa22.65■■□□□ 1.22
GPN3-204ENST00000546592 UPF2Q9HAU5 1272 aaKnown RBP22.65■■□□□ 1.22
GPN3-204ENST00000546592 WDR19Q8NEZ3 1342 aa22.64■■□□□ 1.22
GPN3-204ENST00000546592 TLR2O60603 784 aa22.64■■□□□ 1.21
GPN3-204ENST00000546592 SLC1A4P43007 532 aa22.64■■□□□ 1.21
GPN3-204ENST00000546592 CTCFP49711 727 aaPredicted RBP22.64■■□□□ 1.21
GPN3-204ENST00000546592 FAM83BQ5T0W9 1011 aa22.64■■□□□ 1.21
GPN3-204ENST00000546592 BLOC1S2Q6QNY1 142 aa22.64■■□□□ 1.21
GPN3-204ENST00000546592 TMTC2Q8N394 836 aa22.64■■□□□ 1.21
GPN3-204ENST00000546592 PNMA1Q8ND90 353 aa22.64■■□□□ 1.21
GPN3-204ENST00000546592 GTF3C2Q8WUA4 911 aaPredicted RBP22.64■■□□□ 1.21
GPN3-204ENST00000546592 DCAF4Q8WV16 495 aa22.64■■□□□ 1.21
GPN3-204ENST00000546592 ISY1Q9ULR0 285 aaKnown RBP22.64■■□□□ 1.21
GPN3-204ENST00000546592 MTMR7Q9Y216 660 aa22.64■■□□□ 1.21
GPN3-204ENST00000546592 FOXN1O15353 648 aa22.63■■□□□ 1.21
GPN3-204ENST00000546592 BMP3P12645 472 aa22.63■■□□□ 1.21
GPN3-204ENST00000546592 GCLCP48506 637 aaPredicted RBP22.63■■□□□ 1.21
GPN3-204ENST00000546592 ANAPC15P60006 121 aa22.63■■□□□ 1.21
GPN3-204ENST00000546592 COG2Q14746 738 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms