RNA–Protein interactions for RNA: ENST00000546512.5

LINC00661-201, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-201ENST00000546512 ERVK-24P63145 666 aa15.5■□□□□ 0.07
LINC00661-201ENST00000546512 PPARAQ07869 468 aa15.5■□□□□ 0.07
LINC00661-201ENST00000546512 KIAA1755Q5JYT7 1200 aa15.5■□□□□ 0.07
LINC00661-201ENST00000546512 POTEEQ6S8J3 1075 aa15.5■□□□□ 0.07
LINC00661-201ENST00000546512 ZNF444Q8N0Y2 327 aaPredicted RBP15.5■□□□□ 0.07
LINC00661-201ENST00000546512 SPICE1Q8N0Z3 855 aa15.5■□□□□ 0.07
LINC00661-201ENST00000546512 TMEM106CQ9BVX2 250 aa15.5■□□□□ 0.07
LINC00661-201ENST00000546512 VCPKMTQ9H867 229 aa15.5■□□□□ 0.07
LINC00661-201ENST00000546512 BIN2Q9UBW5 565 aaPredicted RBP15.5■□□□□ 0.07
LINC00661-201ENST00000546512 SPDYE16A6NNV3 312 aaPredicted RBP15.49■□□□□ 0.07
LINC00661-201ENST00000546512 ADCY3O60266 1144 aa15.49■□□□□ 0.07
LINC00661-201ENST00000546512 SDSP20132 328 aa15.49■□□□□ 0.07
LINC00661-201ENST00000546512 PDE4AP27815 886 aa15.49■□□□□ 0.07
LINC00661-201ENST00000546512 PDE4BQ07343 736 aa15.49■□□□□ 0.07
LINC00661-201ENST00000546512 IRF5Q13568 498 aa15.49■□□□□ 0.07
LINC00661-201ENST00000546512 Q3C1V9 767 aa15.49■□□□□ 0.07
LINC00661-201ENST00000546512 LBX2Q6XYB7 198 aa15.49■□□□□ 0.07
LINC00661-201ENST00000546512 CCAR1Q8IX12 1150 aaKnown RBP15.49■□□□□ 0.07
LINC00661-201ENST00000546512 SLAIN1Q8ND83 568 aa15.49■□□□□ 0.07
LINC00661-201ENST00000546512 RABGAP1Q9Y3P9 1069 aa15.49■□□□□ 0.07
LINC00661-201ENST00000546512 GREB1LQ9C091 1923 aaPredicted RBP15.49■□□□□ 0.07
LINC00661-201ENST00000546512 RAD21O60216 631 aa15.48■□□□□ 0.07
LINC00661-201ENST00000546512 CNMDO75829 334 aa15.48■□□□□ 0.07
LINC00661-201ENST00000546512 MAPK4P31152 587 aa15.48■□□□□ 0.07
LINC00661-201ENST00000546512 CTDSPL2Q05D32 466 aa15.48■□□□□ 0.07
LINC00661-201ENST00000546512 COG2Q14746 738 aa15.48■□□□□ 0.07
LINC00661-201ENST00000546512 ZNF589Q86UQ0 364 aaPredicted RBP15.48■□□□□ 0.07
LINC00661-201ENST00000546512 PORCNQ9H237 461 aa15.48■□□□□ 0.07
LINC00661-201ENST00000546512 GOPCQ9HD26 462 aa15.48■□□□□ 0.07
LINC00661-201ENST00000546512 DIAPH3Q9NSV4 1193 aa15.48■□□□□ 0.07
LINC00661-201ENST00000546512 CCDC171Q6TFL3 1326 aa15.47■□□□□ 0.07
LINC00661-201ENST00000546512 WDR46O15213 610 aaKnown RBP15.47■□□□□ 0.07
LINC00661-201ENST00000546512 TSPY3P0CV98 308 aa15.47■□□□□ 0.07
LINC00661-201ENST00000546512 TSPY8P0CW00 308 aa15.47■□□□□ 0.07
LINC00661-201ENST00000546512 ELNP15502 786 aa15.47■□□□□ 0.07
LINC00661-201ENST00000546512 UBXN2AP68543 259 aa15.47■□□□□ 0.07
LINC00661-201ENST00000546512 CCNA1P78396 465 aa15.47■□□□□ 0.07
LINC00661-201ENST00000546512 MTFR1Q15390 333 aa15.47■□□□□ 0.07
LINC00661-201ENST00000546512 ALX1Q15699 326 aa15.47■□□□□ 0.07
LINC00661-201ENST00000546512 PXYLP1Q8TE99 480 aa15.47■□□□□ 0.07
LINC00661-201ENST00000546512 CWC22Q9HCG8 908 aaKnown RBP15.47■□□□□ 0.07
LINC00661-201ENST00000546512 HOXC10Q9NYD6 342 aa15.47■□□□□ 0.07
LINC00661-201ENST00000546512 BTBD7Q9P203 1132 aa15.47■□□□□ 0.07
LINC00661-201ENST00000546512 NYAP2Q9P242 653 aa15.47■□□□□ 0.07
LINC00661-201ENST00000546512 GJD2Q9UKL4 321 aa15.47■□□□□ 0.07
LINC00661-201ENST00000546512 RBBP6Q7Z6E9 1792 aaKnown RBP15.47■□□□□ 0.07
LINC00661-201ENST00000546512 IGKV6D-41A0A0C4DH26 115 aa15.46■□□□□ 0.07
LINC00661-201ENST00000546512 HIP1O00291 1037 aa15.46■□□□□ 0.07
LINC00661-201ENST00000546512 FLOT1O75955 427 aa15.46■□□□□ 0.07
LINC00661-201ENST00000546512 HSPD1P10809 573 aaKnown RBP15.46■□□□□ 0.07
LINC00661-201ENST00000546512 EN2P19622 333 aaPredicted RBP15.46■□□□□ 0.07
LINC00661-201ENST00000546512 DSG3P32926 999 aa15.46■□□□□ 0.07
LINC00661-201ENST00000546512 MFAP1P55081 439 aaKnown RBP15.46■□□□□ 0.07
LINC00661-201ENST00000546512 TFAP4Q01664 338 aa15.46■□□□□ 0.07
LINC00661-201ENST00000546512 FAM47AQ5JRC9 791 aa15.46■□□□□ 0.07
LINC00661-201ENST00000546512 SAMD1Q6SPF0 538 aaPredicted RBP15.46■□□□□ 0.07
LINC00661-201ENST00000546512 CWC27Q6UX04 472 aaKnown RBP15.46■□□□□ 0.07
LINC00661-201ENST00000546512 NEDD1Q8NHV4 660 aa15.46■□□□□ 0.07
LINC00661-201ENST00000546512 SOCS4Q8WXH5 440 aa15.46■□□□□ 0.07
LINC00661-201ENST00000546512 CLIP2Q9UDT6 1046 aa15.46■□□□□ 0.07
LINC00661-201ENST00000546512 ANAPC4Q9UJX5 808 aa15.46■□□□□ 0.07
LINC00661-201ENST00000546512 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.46■□□□□ 0.07
LINC00661-201ENST00000546512 PLIN4Q96Q06 1357 aa15.46■□□□□ 0.07
LINC00661-201ENST00000546512 FGAP02671 866 aa15.45■□□□□ 0.06
LINC00661-201ENST00000546512 INHAP05111 366 aa15.45■□□□□ 0.06
LINC00661-201ENST00000546512 GSPT1P15170 499 aaKnown RBP15.45■□□□□ 0.06
LINC00661-201ENST00000546512 FAM83BQ5T0W9 1011 aa15.45■□□□□ 0.06
LINC00661-201ENST00000546512 TTC22Q5TAA0 569 aa15.45■□□□□ 0.06
LINC00661-201ENST00000546512 WDR78Q5VTH9 848 aa15.45■□□□□ 0.06
LINC00661-201ENST00000546512 GPR142Q7Z601 462 aa15.45■□□□□ 0.06
LINC00661-201ENST00000546512 PLEKHH3Q7Z736 793 aa15.45■□□□□ 0.06
LINC00661-201ENST00000546512 ATG4CQ96DT6 458 aa15.45■□□□□ 0.06
LINC00661-201ENST00000546512 CEP95Q96GE4 821 aa15.45■□□□□ 0.06
LINC00661-201ENST00000546512 NUDT12Q9BQG2 462 aa15.45■□□□□ 0.06
LINC00661-201ENST00000546512 MTMR4Q9NYA4 1195 aa15.45■□□□□ 0.06
LINC00661-201ENST00000546512 DOCK3Q8IZD9 2030 aa15.44■□□□□ 0.06
LINC00661-201ENST00000546512 ZMYM6O95789 1325 aa15.44■□□□□ 0.06
LINC00661-201ENST00000546512 TSPY2A6NKD2 308 aa15.44■□□□□ 0.06
LINC00661-201ENST00000546512 TTLL1O95922 423 aa15.44■□□□□ 0.06
LINC00661-201ENST00000546512 CCL5P13501 91 aa15.44■□□□□ 0.06
LINC00661-201ENST00000546512 CYP2B6P20813 491 aa15.44■□□□□ 0.06
LINC00661-201ENST00000546512 MB21D1Q8N884 522 aa15.44■□□□□ 0.06
LINC00661-201ENST00000546512 RNF208Q9H0X6 261 aa15.44■□□□□ 0.06
LINC00661-201ENST00000546512 INCENPQ9NQS7 918 aa15.44■□□□□ 0.06
LINC00661-201ENST00000546512 BRCA2P51587 3418 aa15.44■□□□□ 0.06
LINC00661-201ENST00000546512 A0A0G2JMZ2 1700 aa15.43■□□□□ 0.06
LINC00661-201ENST00000546512 F5H6K3 240 aa15.43■□□□□ 0.06
LINC00661-201ENST00000546512 NDUFB10O96000 172 aa15.43■□□□□ 0.06
LINC00661-201ENST00000546512 KLRC3Q07444 240 aa15.43■□□□□ 0.06
LINC00661-201ENST00000546512 LRRC47Q8N1G4 583 aaKnown RBP15.43■□□□□ 0.06
LINC00661-201ENST00000546512 MKL1Q969V6 931 aa15.43■□□□□ 0.06
LINC00661-201ENST00000546512 NUP88Q99567 741 aaPredicted RBP15.43■□□□□ 0.06
LINC00661-201ENST00000546512 SPATC1LQ9H0A9 340 aa15.43■□□□□ 0.06
LINC00661-201ENST00000546512 UNC93B1Q9H1C4 597 aa15.43■□□□□ 0.06
LINC00661-201ENST00000546512 TOMM22Q9NS69 142 aa15.43■□□□□ 0.06
LINC00661-201ENST00000546512 FBXO28Q9NVF7 368 aa15.43■□□□□ 0.06
LINC00661-201ENST00000546512 TACC3Q9Y6A5 838 aa15.43■□□□□ 0.06
LINC00661-201ENST00000546512 RLFQ13129 1914 aa15.43■□□□□ 0.06
LINC00661-201ENST00000546512 PLXNB2O15031 1838 aa15.43■□□□□ 0.06
LINC00661-201ENST00000546512 KIAA0100Q14667 2235 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms