RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 LCORLQ8N3X6 602 aa16.57■□□□□ 0.24
HOXC11-202ENST00000546378 HPS3Q969F9 1004 aa16.57■□□□□ 0.24
HOXC11-202ENST00000546378 CWC15Q9P013 229 aaKnown RBP16.57■□□□□ 0.24
HOXC11-202ENST00000546378 DUSP10Q9Y6W6 482 aa16.57■□□□□ 0.24
HOXC11-202ENST00000546378 COL16A1Q07092 1604 aaPredicted RBP16.57■□□□□ 0.24
HOXC11-202ENST00000546378 VEGFAP15692 232 aaPredicted RBP16.57■□□□□ 0.24
HOXC11-202ENST00000546378 TOB1P50616 345 aaPredicted RBP16.57■□□□□ 0.24
HOXC11-202ENST00000546378 ATP1A2P50993 1020 aa16.57■□□□□ 0.24
HOXC11-202ENST00000546378 CCDC122Q5T0U0 273 aa16.57■□□□□ 0.24
HOXC11-202ENST00000546378 SUSD4Q5VX71 490 aa16.57■□□□□ 0.24
HOXC11-202ENST00000546378 ZBTB38Q8NAP3 1195 aaPredicted RBP16.57■□□□□ 0.24
HOXC11-202ENST00000546378 LINC00116Q8NCU8 138 aa16.57■□□□□ 0.24
HOXC11-202ENST00000546378 GPKOWQ92917 476 aaPredicted RBP eCLIP16.57■□□□□ 0.24
HOXC11-202ENST00000546378 NBPF3Q9H094 633 aa16.57■□□□□ 0.24
HOXC11-202ENST00000546378 TRPC5Q9UL62 973 aaPredicted RBP16.57■□□□□ 0.24
HOXC11-202ENST00000546378 AKAP2Q9Y2D5 859 aa16.57■□□□□ 0.24
HOXC11-202ENST00000546378 COL14A1Q05707 1796 aaKnown RBP16.57■□□□□ 0.24
HOXC11-202ENST00000546378 SPATA31A6Q5VVP1 1343 aa16.57■□□□□ 0.24
HOXC11-202ENST00000546378 PHLPP2Q6ZVD8 1323 aa16.57■□□□□ 0.24
HOXC11-202ENST00000546378 MRC1P22897 1456 aa16.56■□□□□ 0.24
HOXC11-202ENST00000546378 ABCA3Q99758 1704 aa16.56■□□□□ 0.24
HOXC11-202ENST00000546378 C5P01031 1676 aa16.56■□□□□ 0.24
HOXC11-202ENST00000546378 SH2B2O14492 632 aaPredicted RBP16.56■□□□□ 0.24
HOXC11-202ENST00000546378 ERLIN1O75477 346 aa16.56■□□□□ 0.24
HOXC11-202ENST00000546378 TRIM37O94972 964 aa16.56■□□□□ 0.24
HOXC11-202ENST00000546378 ZRANB2O95218 330 aaKnown RBP eCLIP16.56■□□□□ 0.24
HOXC11-202ENST00000546378 ZMYM6O95789 1325 aa16.56■□□□□ 0.24
HOXC11-202ENST00000546378 SALL1Q9NSC2 1324 aa16.56■□□□□ 0.24
HOXC11-202ENST00000546378 CUTAO60888 179 aa16.56■□□□□ 0.24
HOXC11-202ENST00000546378 CYP7A1P22680 504 aa16.56■□□□□ 0.24
HOXC11-202ENST00000546378 KLK7P49862 253 aa16.56■□□□□ 0.24
HOXC11-202ENST00000546378 NLRP5P59047 1200 aa16.56■□□□□ 0.24
HOXC11-202ENST00000546378 PTPAQ15257 358 aa16.56■□□□□ 0.24
HOXC11-202ENST00000546378 IFNL3Q8IZI9 196 aa16.56■□□□□ 0.24
HOXC11-202ENST00000546378 PARP4Q9UKK3 1724 aaKnown RBP16.56■□□□□ 0.24
HOXC11-202ENST00000546378 KCPQ6ZWJ8 1503 aa16.55■□□□□ 0.24
HOXC11-202ENST00000546378 TRIM75PA6NK02 468 aa16.55■□□□□ 0.24
HOXC11-202ENST00000546378 RESP18Q5W5W9 173 aa16.55■□□□□ 0.24
HOXC11-202ENST00000546378 MED15Q96RN5 788 aa16.55■□□□□ 0.24
HOXC11-202ENST00000546378 CRACR2AQ9BSW2 395 aa16.55■□□□□ 0.24
HOXC11-202ENST00000546378 ANKRD18BA2A2Z9 1011 aa16.55■□□□□ 0.24
HOXC11-202ENST00000546378 TRIM21P19474 475 aaKnown RBP16.55■□□□□ 0.24
HOXC11-202ENST00000546378 MAP3K9P80192 1104 aa16.55■□□□□ 0.24
HOXC11-202ENST00000546378 C2orf54Q08AI8 447 aa16.55■□□□□ 0.24
HOXC11-202ENST00000546378 CASP8Q14790 479 aa16.55■□□□□ 0.24
HOXC11-202ENST00000546378 KANSL2Q9H9L4 492 aa16.55■□□□□ 0.24
HOXC11-202ENST00000546378 ADGRG1Q9Y653 693 aa16.55■□□□□ 0.24
HOXC11-202ENST00000546378 IKBKBO14920 756 aa16.55■□□□□ 0.24
HOXC11-202ENST00000546378 PCCAP05165 728 aaPredicted RBP16.55■□□□□ 0.24
HOXC11-202ENST00000546378 SLIT2O94813 1529 aa16.54■□□□□ 0.24
HOXC11-202ENST00000546378 IPO7O95373 1038 aaKnown RBP16.54■□□□□ 0.24
HOXC11-202ENST00000546378 SSBP05455 408 aaKnown RBP eCLIP16.54■□□□□ 0.24
HOXC11-202ENST00000546378 CUL4BQ13620 913 aa16.54■□□□□ 0.24
HOXC11-202ENST00000546378 RABL6Q3YEC7 729 aaPredicted RBP16.54■□□□□ 0.24
HOXC11-202ENST00000546378 CCDC178Q5BJE1 867 aa16.54■□□□□ 0.24
HOXC11-202ENST00000546378 KRT26Q7Z3Y9 468 aa16.54■□□□□ 0.24
HOXC11-202ENST00000546378 SRGAP1Q7Z6B7 1085 aa16.54■□□□□ 0.24
HOXC11-202ENST00000546378 TRIM47Q96LD4 638 aa16.54■□□□□ 0.24
HOXC11-202ENST00000546378 TANGO6Q9C0B7 1094 aa16.54■□□□□ 0.24
HOXC11-202ENST00000546378 PKD1L3Q7Z443 1732 aa16.54■□□□□ 0.24
HOXC11-202ENST00000546378 STX10O60499 249 aa16.54■□□□□ 0.24
HOXC11-202ENST00000546378 EIF3JO75822 258 aaKnown RBP16.54■□□□□ 0.24
HOXC11-202ENST00000546378 DYNLL1P63167 89 aaKnown RBP16.54■□□□□ 0.24
HOXC11-202ENST00000546378 DPYDQ12882 1025 aa16.54■□□□□ 0.24
HOXC11-202ENST00000546378 PTGDRQ13258 359 aa16.54■□□□□ 0.24
HOXC11-202ENST00000546378 HDXQ7Z353 690 aa16.54■□□□□ 0.24
HOXC11-202ENST00000546378 CACNA1FO60840 1977 aa16.54■□□□□ 0.24
HOXC11-202ENST00000546378 LRRIQ3A6PVS8 624 aaPredicted RBP16.53■□□□□ 0.24
HOXC11-202ENST00000546378 H0YHG0 523 aa16.53■□□□□ 0.24
HOXC11-202ENST00000546378 MYO1BO43795 1136 aa16.53■□□□□ 0.24
HOXC11-202ENST00000546378 LY9Q9HBG7 655 aa16.53■□□□□ 0.24
HOXC11-202ENST00000546378 BACH1O14867 736 aa16.53■□□□□ 0.24
HOXC11-202ENST00000546378 GYG1P46976 350 aa16.53■□□□□ 0.24
HOXC11-202ENST00000546378 CCT5P48643 541 aa16.53■□□□□ 0.24
HOXC11-202ENST00000546378 DEF6Q9H4E7 631 aa16.53■□□□□ 0.24
HOXC11-202ENST00000546378 ZHX3Q9H4I2 956 aa16.53■□□□□ 0.24
HOXC11-202ENST00000546378 GTF2A1P52655 376 aaPredicted RBP16.53■□□□□ 0.24
HOXC11-202ENST00000546378 CCDC96Q2M329 555 aa16.53■□□□□ 0.24
HOXC11-202ENST00000546378 TMEM139Q8IV31 216 aa16.53■□□□□ 0.24
HOXC11-202ENST00000546378 KSR1Q8IVT5 923 aa16.53■□□□□ 0.24
HOXC11-202ENST00000546378 ANKRD20A12PQ8NF67 263 aa16.53■□□□□ 0.24
HOXC11-202ENST00000546378 IFT81Q8WYA0 676 aa16.53■□□□□ 0.24
HOXC11-202ENST00000546378 NAPGQ99747 312 aaPredicted RBP16.53■□□□□ 0.24
HOXC11-202ENST00000546378 ANKZF1Q9H8Y5 726 aa16.53■□□□□ 0.24
HOXC11-202ENST00000546378 RNF40O75150 1001 aa16.52■□□□□ 0.24
HOXC11-202ENST00000546378 MAP3K12Q12852 859 aa16.52■□□□□ 0.24
HOXC11-202ENST00000546378 TTLL11Q8NHH1 800 aa16.52■□□□□ 0.24
HOXC11-202ENST00000546378 EPB41L4AQ9HCS5 686 aaPredicted RBP16.52■□□□□ 0.24
HOXC11-202ENST00000546378 DACH1Q9UI36 760 aa16.52■□□□□ 0.24
HOXC11-202ENST00000546378 CDC23Q9UJX2 597 aa16.52■□□□□ 0.24
HOXC11-202ENST00000546378 ESYT3A0FGR9 886 aa16.52■□□□□ 0.23
HOXC11-202ENST00000546378 ATL3Q6DD88 541 aa16.52■□□□□ 0.23
HOXC11-202ENST00000546378 SAMD1Q6SPF0 538 aaPredicted RBP16.52■□□□□ 0.23
HOXC11-202ENST00000546378 DNAAF5Q86Y56 855 aa16.52■□□□□ 0.23
HOXC11-202ENST00000546378 ZNF654Q8IZM8 581 aa16.52■□□□□ 0.23
HOXC11-202ENST00000546378 RABGGTAQ92696 567 aa16.52■□□□□ 0.23
HOXC11-202ENST00000546378 MAP3K14Q99558 947 aa16.52■□□□□ 0.23
HOXC11-202ENST00000546378 ALDH8A1Q9H2A2 487 aaPredicted RBP16.52■□□□□ 0.23
HOXC11-202ENST00000546378 LRP6O75581 1613 aa16.52■□□□□ 0.23
HOXC11-202ENST00000546378 PDE6BP35913 854 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms