RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 A0A1W2PNR3 127 aa8.69□□□□□ -1.02
CCDC60-205ENST00000546345 WTIPA6NIX2 430 aaPredicted RBP8.69□□□□□ -1.02
CCDC60-205ENST00000546345 ATP2B4P23634 1241 aa8.69□□□□□ -1.02
CCDC60-205ENST00000546345 FOXR1Q6PIV2 292 aa8.69□□□□□ -1.02
CCDC60-205ENST00000546345 DDX46Q7L014 1031 aaKnown RBP8.69□□□□□ -1.02
CCDC60-205ENST00000546345 TMC4Q7Z404 712 aa8.69□□□□□ -1.02
CCDC60-205ENST00000546345 RETREG2Q8NC44 543 aa8.69□□□□□ -1.02
CCDC60-205ENST00000546345 ZNF837Q96EG3 531 aaPredicted RBP8.69□□□□□ -1.02
CCDC60-205ENST00000546345 WNK4Q96J92 1243 aa8.69□□□□□ -1.02
CCDC60-205ENST00000546345 THUMPD2Q9BTF0 503 aaKnown RBP8.69□□□□□ -1.02
CCDC60-205ENST00000546345 KNSTRNQ9Y448 316 aa8.69□□□□□ -1.02
CCDC60-205ENST00000546345 PTPRFP10586 1907 aa8.69□□□□□ -1.02
CCDC60-205ENST00000546345 FRMPD3Q5JV73 1810 aa8.68□□□□□ -1.02
CCDC60-205ENST00000546345 AK9Q5TCS8 1911 aa8.68□□□□□ -1.02
CCDC60-205ENST00000546345 LAMA2P24043 3122 aaKnown RBP8.68□□□□□ -1.02
CCDC60-205ENST00000546345 CARNS1A5YM72 827 aa8.68□□□□□ -1.02
CCDC60-205ENST00000546345 MANSC4A6NHS7 340 aaPredicted RBP8.68□□□□□ -1.02
CCDC60-205ENST00000546345 VSIG8P0DPA2 414 aa8.68□□□□□ -1.02
CCDC60-205ENST00000546345 EIF4A1P60842 406 aaKnown RBP8.68□□□□□ -1.02
CCDC60-205ENST00000546345 FKBP5Q13451 457 aaPredicted RBP8.68□□□□□ -1.02
CCDC60-205ENST00000546345 PRKG1Q13976 671 aa8.68□□□□□ -1.02
CCDC60-205ENST00000546345 SLC9C1Q4G0N8 1177 aa8.68□□□□□ -1.02
CCDC60-205ENST00000546345 NLRP8Q86W28 1048 aa8.68□□□□□ -1.02
CCDC60-205ENST00000546345 RHPN1Q8TCX5 695 aa8.68□□□□□ -1.02
CCDC60-205ENST00000546345 SH3TC2Q8TF17 1288 aa8.68□□□□□ -1.02
CCDC60-205ENST00000546345 ZNF428Q96B54 188 aa8.68□□□□□ -1.02
CCDC60-205ENST00000546345 PTPN18Q99952 460 aa8.68□□□□□ -1.02
CCDC60-205ENST00000546345 BCL11AQ9H165 835 aa8.68□□□□□ -1.02
CCDC60-205ENST00000546345 GPC6Q9Y625 555 aaPredicted RBP8.68□□□□□ -1.02
CCDC60-205ENST00000546345 ERBB4Q15303 1308 aa8.68□□□□□ -1.02
CCDC60-205ENST00000546345 A0A1W2PPC1 479 aa8.67□□□□□ -1.02
CCDC60-205ENST00000546345 WNT10BO00744 389 aa8.67□□□□□ -1.02
CCDC60-205ENST00000546345 SASH1O94885 1247 aa8.67□□□□□ -1.02
CCDC60-205ENST00000546345 ANXA1P04083 346 aa8.67□□□□□ -1.02
CCDC60-205ENST00000546345 ZBTB48P10074 688 aaPredicted RBP8.67□□□□□ -1.02
CCDC60-205ENST00000546345 Q7L0L9 218 aa8.67□□□□□ -1.02
CCDC60-205ENST00000546345 SH3TC1Q8TE82 1336 aa8.67□□□□□ -1.02
CCDC60-205ENST00000546345 GTPBP3Q969Y2 492 aaKnown RBP8.67□□□□□ -1.02
CCDC60-205ENST00000546345 MXD3Q9BW11 206 aa8.67□□□□□ -1.02
CCDC60-205ENST00000546345 SUPT16HQ9Y5B9 1047 aaKnown RBP8.67□□□□□ -1.02
CCDC60-205ENST00000546345 MAST2Q6P0Q8 1798 aa8.66□□□□□ -1.02
CCDC60-205ENST00000546345 COL2A1P02458 1487 aaPredicted RBP8.66□□□□□ -1.02
CCDC60-205ENST00000546345 HSPA5P11021 654 aaKnown RBP8.66□□□□□ -1.02
CCDC60-205ENST00000546345 SP3Q02447 781 aa8.66□□□□□ -1.02
CCDC60-205ENST00000546345 TCIRG1Q13488 830 aa8.66□□□□□ -1.02
CCDC60-205ENST00000546345 MAP3K11Q16584 847 aa8.66□□□□□ -1.02
CCDC60-205ENST00000546345 SLC4A8Q2Y0W8 1093 aa8.66□□□□□ -1.02
CCDC60-205ENST00000546345 FIGNL1Q6PIW4 674 aa8.66□□□□□ -1.02
CCDC60-205ENST00000546345 GPR161Q8N6U8 529 aaKnown RBP8.66□□□□□ -1.02
CCDC60-205ENST00000546345 TRERF1Q96PN7 1200 aa8.66□□□□□ -1.02
CCDC60-205ENST00000546345 EYA3Q99504 573 aa8.66□□□□□ -1.02
CCDC60-205ENST00000546345 ARHGAP39Q9C0H5 1083 aa8.66□□□□□ -1.02
CCDC60-205ENST00000546345 PODXL2Q9NZ53 605 aa8.66□□□□□ -1.02
CCDC60-205ENST00000546345 ANGEL1Q9UNK9 670 aaKnown RBP8.66□□□□□ -1.02
CCDC60-205ENST00000546345 STXBP5LQ9Y2K9 1186 aa8.66□□□□□ -1.02
CCDC60-205ENST00000546345 LTBP2Q14767 1821 aa8.66□□□□□ -1.02
CCDC60-205ENST00000546345 UFL1O94874 794 aa8.65□□□□□ -1.02
CCDC60-205ENST00000546345 THBS1P07996 1170 aa8.65□□□□□ -1.02
CCDC60-205ENST00000546345 SF3B3Q15393 1217 aaKnown RBP8.65□□□□□ -1.02
CCDC60-205ENST00000546345 TAF7Q15545 349 aaPredicted RBP8.65□□□□□ -1.02
CCDC60-205ENST00000546345 RTN1Q16799 776 aa8.65□□□□□ -1.02
CCDC60-205ENST00000546345 CC2D1BQ5T0F9 858 aaKnown RBP8.65□□□□□ -1.02
CCDC60-205ENST00000546345 ARMC9Q7Z3E5 817 aa8.65□□□□□ -1.02
CCDC60-205ENST00000546345 ZBED3Q96IU2 234 aaPredicted RBP8.65□□□□□ -1.02
CCDC60-205ENST00000546345 MKNK1Q9BUB5 465 aa8.65□□□□□ -1.02
CCDC60-205ENST00000546345 ZCCHC2Q9C0B9 1178 aaKnown RBP8.65□□□□□ -1.02
CCDC60-205ENST00000546345 ANKIB1Q9P2G1 1089 aa8.65□□□□□ -1.02
CCDC60-205ENST00000546345 NF2P35240 595 aa8.64□□□□□ -1.03
CCDC60-205ENST00000546345 INHBEP58166 350 aa8.64□□□□□ -1.03
CCDC60-205ENST00000546345 HIF1AQ16665 826 aa8.64□□□□□ -1.03
CCDC60-205ENST00000546345 DACT2Q5SW24 774 aa8.64□□□□□ -1.03
CCDC60-205ENST00000546345 LRRC69Q6ZNQ3 347 aa8.64□□□□□ -1.03
CCDC60-205ENST00000546345 RTF1Q92541 710 aaKnown RBP8.64□□□□□ -1.03
CCDC60-205ENST00000546345 DPF3Q92784 378 aa8.64□□□□□ -1.03
CCDC60-205ENST00000546345 COL26A1Q96A83 441 aa8.64□□□□□ -1.03
CCDC60-205ENST00000546345 MTMR10Q9NXD2 777 aa8.64□□□□□ -1.03
CCDC60-205ENST00000546345 TRMT112Q9UI30 125 aaKnown RBP8.64□□□□□ -1.03
CCDC60-205ENST00000546345 PHF24Q9UPV7 400 aa8.64□□□□□ -1.03
CCDC60-205ENST00000546345 AOX1Q06278 1338 aa8.63□□□□□ -1.03
CCDC60-205ENST00000546345 HTATSF1O43719 755 aaKnown RBP8.63□□□□□ -1.03
CCDC60-205ENST00000546345 CTGFP29279 349 aa8.63□□□□□ -1.03
CCDC60-205ENST00000546345 UBAP2LQ14157 1087 aaKnown RBP8.63□□□□□ -1.03
CCDC60-205ENST00000546345 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.63□□□□□ -1.03
CCDC60-205ENST00000546345 DEFB123Q8N688 67 aa8.63□□□□□ -1.03
CCDC60-205ENST00000546345 PCDHGC4Q9Y5F7 938 aa8.63□□□□□ -1.03
CCDC60-205ENST00000546345 MED23Q9ULK4 1368 aa8.62□□□□□ -1.03
CCDC60-205ENST00000546345 PLXNB2O15031 1838 aa8.62□□□□□ -1.03
CCDC60-205ENST00000546345 ATXN7O15265 892 aaPredicted RBP8.62□□□□□ -1.03
CCDC60-205ENST00000546345 GMPRP36959 345 aa8.62□□□□□ -1.03
CCDC60-205ENST00000546345 LCE2AQ5TA79 106 aaPredicted RBP8.62□□□□□ -1.03
CCDC60-205ENST00000546345 B4GALNT3Q6L9W6 998 aa8.62□□□□□ -1.03
CCDC60-205ENST00000546345 NBPF11Q86T75 865 aa8.62□□□□□ -1.03
CCDC60-205ENST00000546345 APOBEC3FQ8IUX4 373 aaKnown RBP8.62□□□□□ -1.03
CCDC60-205ENST00000546345 BRI3BPQ8WY22 251 aa8.62□□□□□ -1.03
CCDC60-205ENST00000546345 MYO19Q96H55 970 aa8.62□□□□□ -1.03
CCDC60-205ENST00000546345 SUSD3Q96L08 255 aa8.62□□□□□ -1.03
CCDC60-205ENST00000546345 ZC3H12CQ9C0D7 883 aaKnown RBP8.62□□□□□ -1.03
CCDC60-205ENST00000546345 SEC31BQ9NQW1 1179 aa8.62□□□□□ -1.03
CCDC60-205ENST00000546345 PRDM6Q9NQX0 595 aa8.62□□□□□ -1.03
CCDC60-205ENST00000546345 PHIPQ8WWQ0 1821 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms