RNA–Protein interactions for RNA: ENST00000546312.5

SLC3A2-223, Transcript of solute carrier family 3 member 2, human

TSL 2

Gene SLC3A2, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC3A2-223	ENST00000546312	PDE6A	P16499	860 aa		10.66	□□□□□ -0.7
SLC3A2-223	ENST00000546312	BTD	P43251	543 aa		10.66	□□□□□ -0.7
SLC3A2-223	ENST00000546312	TPM4	P67936	248 aa		10.66	□□□□□ -0.7
SLC3A2-223	ENST00000546312	FOXK1	P85037	733 aa		10.66	□□□□□ -0.7
SLC3A2-223	ENST00000546312	SAFB	Q15424	915 aa	Known RBP eCLIP	10.66	□□□□□ -0.7
SLC3A2-223	ENST00000546312	ADAL	Q6DHV7	355 aa		10.66	□□□□□ -0.7
SLC3A2-223	ENST00000546312	STOX1	Q6ZVD7	989 aa		10.66	□□□□□ -0.7
SLC3A2-223	ENST00000546312	SGMS1	Q86VZ5	419 aa		10.66	□□□□□ -0.7
SLC3A2-223	ENST00000546312	RNF214	Q8ND24	703 aa		10.66	□□□□□ -0.7
SLC3A2-223	ENST00000546312	FBXO18	Q8NFZ0	1043 aa		10.66	□□□□□ -0.7
SLC3A2-223	ENST00000546312	FAM151A	Q8WW52	585 aa		10.66	□□□□□ -0.7
SLC3A2-223	ENST00000546312	GLIS2	Q9BZE0	524 aa	Predicted RBP	10.66	□□□□□ -0.7
SLC3A2-223	ENST00000546312	NAPB	Q9H115	298 aa		10.66	□□□□□ -0.7
SLC3A2-223	ENST00000546312	DEFB129	Q9H1M3	183 aa		10.66	□□□□□ -0.7
SLC3A2-223	ENST00000546312	POLR3E	Q9NVU0	708 aa		10.66	□□□□□ -0.7
SLC3A2-223	ENST00000546312	ANO10	Q9NW15	660 aa		10.66	□□□□□ -0.7
SLC3A2-223	ENST00000546312	DACT1	Q9NYF0	836 aa		10.66	□□□□□ -0.7
SLC3A2-223	ENST00000546312	ORC3	Q9UBD5	711 aa	Predicted RBP	10.66	□□□□□ -0.7
SLC3A2-223	ENST00000546312	PCDHAC2	Q9Y5I4	1007 aa		10.66	□□□□□ -0.7
SLC3A2-223	ENST00000546312	CDK5RAP2	Q96SN8	1893 aa		10.66	□□□□□ -0.7
SLC3A2-223	ENST00000546312	ASTN2	O75129	1339 aa	Predicted RBP	10.65	□□□□□ -0.7
SLC3A2-223	ENST00000546312	PASK	Q96RG2	1323 aa		10.65	□□□□□ -0.7
SLC3A2-223	ENST00000546312	STK36	Q9NRP7	1315 aa		10.65	□□□□□ -0.7
SLC3A2-223	ENST00000546312	MAGEB6P1	A0A0J9YX57	407 aa		10.65	□□□□□ -0.7
SLC3A2-223	ENST00000546312	KLF18	A0A0U1RQI7	1052 aa		10.65	□□□□□ -0.7
SLC3A2-223	ENST00000546312	TMEM88B	A6NKF7	163 aa		10.65	□□□□□ -0.7
SLC3A2-223	ENST00000546312	GOLGA8B	A8MQT2	603 aa		10.65	□□□□□ -0.7
SLC3A2-223	ENST00000546312	TCP10L2	B9ZVM9	353 aa		10.65	□□□□□ -0.7
SLC3A2-223	ENST00000546312	GOLGA6L19	H0YKK7	550 aa		10.65	□□□□□ -0.7
SLC3A2-223	ENST00000546312	ENTPD3	O75355	529 aa		10.65	□□□□□ -0.7
SLC3A2-223	ENST00000546312	XBP1	P17861	261 aa		10.65	□□□□□ -0.7
SLC3A2-223	ENST00000546312	APLP1	P51693	650 aa		10.65	□□□□□ -0.7
SLC3A2-223	ENST00000546312	FAM160A1	Q05DH4	1040 aa		10.65	□□□□□ -0.7
SLC3A2-223	ENST00000546312	TYRO3	Q06418	890 aa		10.65	□□□□□ -0.7
SLC3A2-223	ENST00000546312	MTERF4	Q7Z6M4	381 aa	Known RBP	10.65	□□□□□ -0.7
SLC3A2-223	ENST00000546312	FERMT3	Q86UX7	667 aa		10.65	□□□□□ -0.7
SLC3A2-223	ENST00000546312	PLPP6	Q8IY26	295 aa		10.65	□□□□□ -0.7
SLC3A2-223	ENST00000546312	TRIM22	Q8IYM9	498 aa		10.65	□□□□□ -0.7
SLC3A2-223	ENST00000546312	C2orf69	Q8N8R5	385 aa		10.65	□□□□□ -0.7
SLC3A2-223	ENST00000546312	ZNF384	Q8TF68	577 aa		10.65	□□□□□ -0.7
SLC3A2-223	ENST00000546312	TCEANC2	Q96MN5	208 aa		10.65	□□□□□ -0.7
SLC3A2-223	ENST00000546312	STRBP	Q96SI9	672 aa	Known RBP	10.65	□□□□□ -0.7
SLC3A2-223	ENST00000546312	IDI2	Q9BXS1	227 aa		10.65	□□□□□ -0.7
SLC3A2-223	ENST00000546312	FOCAD	Q5VW36	1801 aa		10.65	□□□□□ -0.71
SLC3A2-223	ENST00000546312	MYH1	P12882	1939 aa		10.64	□□□□□ -0.71
SLC3A2-223	ENST00000546312	ZNF532	Q9HCE3	1301 aa		10.64	□□□□□ -0.71
SLC3A2-223	ENST00000546312	CCDC69	A6NI79	296 aa		10.64	□□□□□ -0.71
SLC3A2-223	ENST00000546312	ADM5	C9JUS6	153 aa		10.64	□□□□□ -0.71
SLC3A2-223	ENST00000546312	ZBTB43	O43298	467 aa		10.64	□□□□□ -0.71
SLC3A2-223	ENST00000546312	NRDC	O43847	1150 aa		10.64	□□□□□ -0.71
SLC3A2-223	ENST00000546312	JAK2	O60674	1132 aa		10.64	□□□□□ -0.71
SLC3A2-223	ENST00000546312	ADCY5	O95622	1261 aa		10.64	□□□□□ -0.71
SLC3A2-223	ENST00000546312	SLC3A2	P08195	630 aa	Known RBP	10.64	□□□□□ -0.71
SLC3A2-223	ENST00000546312	HSPA6	P17066	643 aa		10.64	□□□□□ -0.71
SLC3A2-223	ENST00000546312	METAP2	P50579	478 aa	Known RBP eCLIP	10.64	□□□□□ -0.71
SLC3A2-223	ENST00000546312	FKBP1B	P68106	108 aa		10.64	□□□□□ -0.71
SLC3A2-223	ENST00000546312	RASA3	Q14644	834 aa		10.64	□□□□□ -0.71
SLC3A2-223	ENST00000546312	STX1A	Q16623	288 aa		10.64	□□□□□ -0.71
SLC3A2-223	ENST00000546312	MFSD6	Q6ZSS7	791 aa		10.64	□□□□□ -0.71
SLC3A2-223	ENST00000546312	ELOA2	Q8IYF1	753 aa	Predicted RBP	10.64	□□□□□ -0.71
SLC3A2-223	ENST00000546312	TEX11	Q8IYF3	940 aa		10.64	□□□□□ -0.71
SLC3A2-223	ENST00000546312	DDX11	Q96FC9	970 aa		10.64	□□□□□ -0.71
SLC3A2-223	ENST00000546312	CDCA5	Q96FF9	252 aa		10.64	□□□□□ -0.71
SLC3A2-223	ENST00000546312	TIGD1	Q96MW7	591 aa		10.64	□□□□□ -0.71
SLC3A2-223	ENST00000546312	NAP1L5	Q96NT1	182 aa	Predicted RBP	10.64	□□□□□ -0.71
SLC3A2-223	ENST00000546312	PUS7L	Q9H0K6	701 aa	Known RBP	10.64	□□□□□ -0.71
SLC3A2-223	ENST00000546312	AATF	Q9NY61	560 aa	Known RBP eCLIP	10.64	□□□□□ -0.71
SLC3A2-223	ENST00000546312	TFIP11	Q9UBB9	837 aa	Known RBP	10.64	□□□□□ -0.71
SLC3A2-223	ENST00000546312	TCRBV5S4A2T	A0A5A2	114 aa		10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	TRAF5	O00463	557 aa		10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	PPP1R12B	O60237	982 aa	Predicted RBP	10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	PPP6R2	O75170	966 aa		10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	CELF2	O95319	508 aa	Known RBP	10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	CALM1	P0DP23	149 aa		10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	CALM2	P0DP24	149 aa		10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	CALM3	P0DP25	149 aa		10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	PRKCSH	P14314	528 aa	Predicted RBP	10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	CDC25B	P30305	580 aa		10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	ME1	P48163	572 aa		10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	RHBDL3	P58872	404 aa		10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	CCT2	P78371	535 aa	Known RBP	10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	CAMK2B	Q13554	666 aa		10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	GNL2	Q13823	731 aa	Known RBP	10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	STK38	Q15208	465 aa		10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	CCDC178	Q5BJE1	867 aa		10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	AKNAD1	Q5T1N1	836 aa		10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	NFXL1	Q6ZNB6	911 aa		10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	CCAR1	Q8IX12	1150 aa	Known RBP	10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	IFNL3	Q8IZI9	196 aa		10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	MRPS27	Q92552	414 aa	Known RBP	10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	MAP7D2	Q96T17	732 aa		10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	CRNKL1	Q9BZJ0	848 aa	Known RBP	10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	ZNF408	Q9H9D4	720 aa		10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	CEP131	Q9UPN4	1083 aa		10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	SLC12A7	Q9Y666	1083 aa		10.63	□□□□□ -0.71
SLC3A2-223	ENST00000546312	UNCX	A6NJT0	531 aa		10.62	□□□□□ -0.71
SLC3A2-223	ENST00000546312	SMTNL1	A8MU46	457 aa		10.62	□□□□□ -0.71
SLC3A2-223	ENST00000546312	BECN2	A8MW95	431 aa		10.62	□□□□□ -0.71
SLC3A2-223	ENST00000546312	SH2B2	O14492	632 aa	Predicted RBP	10.62	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms