RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 GPSM2P81274 684 aa9.67□□□□□ -0.86
CLIP1-218ENST00000545889 LRP10Q7Z4F1 713 aa9.67□□□□□ -0.86
CLIP1-218ENST00000545889 CPLX3Q8WVH0 158 aa9.67□□□□□ -0.86
CLIP1-218ENST00000545889 IFT74Q96LB3 600 aa9.67□□□□□ -0.86
CLIP1-218ENST00000545889 NUP88Q99567 741 aaPredicted RBP9.67□□□□□ -0.86
CLIP1-218ENST00000545889 PHRF1Q9P1Y6 1649 aaKnown RBP9.66□□□□□ -0.86
CLIP1-218ENST00000545889 USP17L12C9JPN9 530 aa9.66□□□□□ -0.86
CLIP1-218ENST00000545889 USP17L21D6R901 530 aa9.66□□□□□ -0.86
CLIP1-218ENST00000545889 CHMP2AO43633 222 aa9.66□□□□□ -0.86
CLIP1-218ENST00000545889 PRDX5P30044 214 aa9.66□□□□□ -0.86
CLIP1-218ENST00000545889 ARL1P40616 181 aaPredicted RBP9.66□□□□□ -0.86
CLIP1-218ENST00000545889 PRPF4BQ13523 1007 aaKnown RBP9.66□□□□□ -0.86
CLIP1-218ENST00000545889 TTC31Q49AM3 519 aaPredicted RBP9.66□□□□□ -0.86
CLIP1-218ENST00000545889 MSANTD4Q8NCY6 345 aa9.66□□□□□ -0.86
CLIP1-218ENST00000545889 GDPD2Q9HCC8 539 aa9.66□□□□□ -0.86
CLIP1-218ENST00000545889 PIM2Q9P1W9 311 aa9.66□□□□□ -0.86
CLIP1-218ENST00000545889 ZBTB12Q9Y330 459 aaPredicted RBP9.66□□□□□ -0.86
CLIP1-218ENST00000545889 AHDC1Q5TGY3 1603 aaPredicted RBP9.66□□□□□ -0.86
CLIP1-218ENST00000545889 M0R2C6 588 aa9.66□□□□□ -0.86
CLIP1-218ENST00000545889 BIN1O00499 593 aa9.66□□□□□ -0.86
CLIP1-218ENST00000545889 NR1I2O75469 434 aa9.66□□□□□ -0.86
CLIP1-218ENST00000545889 FGAP02671 866 aa9.66□□□□□ -0.86
CLIP1-218ENST00000545889 MNAT1P51948 309 aa9.66□□□□□ -0.86
CLIP1-218ENST00000545889 SLC10A4Q96EP9 437 aa9.66□□□□□ -0.86
CLIP1-218ENST00000545889 CCDC169A6NNP5 214 aa9.66□□□□□ -0.86
CLIP1-218ENST00000545889 GJB2P29033 226 aa9.66□□□□□ -0.86
CLIP1-218ENST00000545889 SMTNP53814 917 aa9.66□□□□□ -0.86
CLIP1-218ENST00000545889 ZNF445P59923 1031 aa9.66□□□□□ -0.86
CLIP1-218ENST00000545889 BIRC3Q13489 604 aa9.66□□□□□ -0.86
CLIP1-218ENST00000545889 LUZP1Q86V48 1076 aa9.66□□□□□ -0.86
CLIP1-218ENST00000545889 NCAPG2Q86XI2 1143 aa9.66□□□□□ -0.86
CLIP1-218ENST00000545889 C2orf69Q8N8R5 385 aa9.66□□□□□ -0.86
CLIP1-218ENST00000545889 FNBP1Q96RU3 617 aa9.66□□□□□ -0.86
CLIP1-218ENST00000545889 GLT8D2Q9H1C3 349 aa9.66□□□□□ -0.86
CLIP1-218ENST00000545889 MLXIPQ9HAP2 919 aa9.66□□□□□ -0.86
CLIP1-218ENST00000545889 PLSCR1O15162 318 aa9.65□□□□□ -0.86
CLIP1-218ENST00000545889 YEATS4O95619 227 aa9.65□□□□□ -0.86
CLIP1-218ENST00000545889 HSPA4P34932 840 aa9.65□□□□□ -0.86
CLIP1-218ENST00000545889 KCTD2Q14681 263 aa9.65□□□□□ -0.86
CLIP1-218ENST00000545889 CC2D2BQ6DHV5 1058 aa9.65□□□□□ -0.86
CLIP1-218ENST00000545889 DHX32Q7L7V1 743 aaKnown RBP9.65□□□□□ -0.86
CLIP1-218ENST00000545889 OTUD6BQ8N6M0 293 aa9.65□□□□□ -0.86
CLIP1-218ENST00000545889 KIFC2Q96AC6 838 aa9.65□□□□□ -0.86
CLIP1-218ENST00000545889 NAP1L4Q99733 375 aaKnown RBP9.65□□□□□ -0.86
CLIP1-218ENST00000545889 SFPQP23246 707 aaKnown RBP eCLIP9.65□□□□□ -0.86
CLIP1-218ENST00000545889 ADCK5Q3MIX3 580 aa9.65□□□□□ -0.86
CLIP1-218ENST00000545889 ZMYM1Q5SVZ6 1142 aa9.65□□□□□ -0.86
CLIP1-218ENST00000545889 RUFY3Q7L099 469 aa9.65□□□□□ -0.86
CLIP1-218ENST00000545889 FAM84BQ96KN1 310 aaPredicted RBP9.65□□□□□ -0.86
CLIP1-218ENST00000545889 RMND1Q9NWS8 449 aa9.65□□□□□ -0.86
CLIP1-218ENST00000545889 LRP6O75581 1613 aa9.65□□□□□ -0.86
CLIP1-218ENST00000545889 DISP2A7MBM2 1401 aa9.65□□□□□ -0.86
CLIP1-218ENST00000545889 WTIPA6NIX2 430 aaPredicted RBP9.65□□□□□ -0.86
CLIP1-218ENST00000545889 KLRK1P26718 216 aa9.65□□□□□ -0.86
CLIP1-218ENST00000545889 LSG1Q9H089 658 aaKnown RBP9.65□□□□□ -0.86
CLIP1-218ENST00000545889 ABCC12Q96J65 1359 aa9.65□□□□□ -0.87
CLIP1-218ENST00000545889 TOP1P11387 765 aaKnown RBP9.65□□□□□ -0.87
CLIP1-218ENST00000545889 AFMP43652 599 aa9.65□□□□□ -0.87
CLIP1-218ENST00000545889 DDR1Q08345 913 aa9.65□□□□□ -0.87
CLIP1-218ENST00000545889 MKRN3Q13064 507 aaKnown RBP9.65□□□□□ -0.87
CLIP1-218ENST00000545889 GNPTABQ3T906 1256 aa9.65□□□□□ -0.87
CLIP1-218ENST00000545889 PLVAPQ9BX97 442 aa9.65□□□□□ -0.87
CLIP1-218ENST00000545889 ADD2P35612 726 aa9.64□□□□□ -0.87
CLIP1-218ENST00000545889 RAD51AP2Q09MP3 1159 aa9.64□□□□□ -0.87
CLIP1-218ENST00000545889 IFNL3Q8IZI9 196 aa9.64□□□□□ -0.87
CLIP1-218ENST00000545889 ALS2CR12Q96Q35 445 aa9.64□□□□□ -0.87
CLIP1-218ENST00000545889 MYL10Q9BUA6 226 aa9.64□□□□□ -0.87
CLIP1-218ENST00000545889 CLRN2A0PK11 232 aa9.64□□□□□ -0.87
CLIP1-218ENST00000545889 FMNL1O95466 1100 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-218ENST00000545889 ALAS1P13196 640 aa9.64□□□□□ -0.87
CLIP1-218ENST00000545889 PAFAH1B1P43034 410 aa9.64□□□□□ -0.87
CLIP1-218ENST00000545889 NLRX1Q86UT6 975 aa9.64□□□□□ -0.87
CLIP1-218ENST00000545889 LCORLQ8N3X6 602 aa9.64□□□□□ -0.87
CLIP1-218ENST00000545889 GIMAP7Q8NHV1 300 aa9.64□□□□□ -0.87
CLIP1-218ENST00000545889 TAOK3Q9H2K8 898 aa9.64□□□□□ -0.87
CLIP1-218ENST00000545889 NCOA5Q9HCD5 579 aaKnown RBP9.64□□□□□ -0.87
CLIP1-218ENST00000545889 LMO7Q8WWI1 1683 aa9.64□□□□□ -0.87
CLIP1-218ENST00000545889 H0YHG0 523 aa9.64□□□□□ -0.87
CLIP1-218ENST00000545889 CTAGE5O15320 804 aa9.64□□□□□ -0.87
CLIP1-218ENST00000545889 AKR1B10O60218 316 aa9.64□□□□□ -0.87
CLIP1-218ENST00000545889 BTDP43251 543 aa9.64□□□□□ -0.87
CLIP1-218ENST00000545889 SMC1AQ14683 1233 aaKnown RBP9.64□□□□□ -0.87
CLIP1-218ENST00000545889 LETM2Q2VYF4 491 aa9.64□□□□□ -0.87
CLIP1-218ENST00000545889 USH1GQ495M9 461 aa9.64□□□□□ -0.87
CLIP1-218ENST00000545889 CIAPIN1Q6FI81 312 aa9.64□□□□□ -0.87
CLIP1-218ENST00000545889 FAM193BQ96PV7 902 aaPredicted RBP9.64□□□□□ -0.87
CLIP1-218ENST00000545889 CD209Q9NNX6 404 aa9.64□□□□□ -0.87
CLIP1-218ENST00000545889 RNF181Q9P0P0 153 aa9.64□□□□□ -0.87
CLIP1-218ENST00000545889 CYP2D7A0A087X1C5 515 aa9.63□□□□□ -0.87
CLIP1-218ENST00000545889 AOC3Q16853 763 aa9.63□□□□□ -0.87
CLIP1-218ENST00000545889 RRAGBQ5VZM2 374 aa9.63□□□□□ -0.87
CLIP1-218ENST00000545889 CCDC91Q7Z6B0 441 aa9.63□□□□□ -0.87
CLIP1-218ENST00000545889 RNF34Q969K3 372 aa9.63□□□□□ -0.87
CLIP1-218ENST00000545889 TSNARE1Q96NA8 513 aa9.63□□□□□ -0.87
CLIP1-218ENST00000545889 ZNF277Q9NRM2 450 aaPredicted RBP9.63□□□□□ -0.87
CLIP1-218ENST00000545889 CNPY2Q9Y2B0 182 aa9.63□□□□□ -0.87
CLIP1-218ENST00000545889 E7EWF7 191 aa9.63□□□□□ -0.87
CLIP1-218ENST00000545889 PSMA7O14818 248 aa9.63□□□□□ -0.87
CLIP1-218ENST00000545889 FLOT1O75955 427 aa9.63□□□□□ -0.87
CLIP1-218ENST00000545889 UBE3CQ15386 1083 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms