RNA–Protein interactions for RNA: ENST00000545868.4

GABRB3-205, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 1,267 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-205ENST00000545868 HOXB1P14653 301 aaPredicted RBP11.78□□□□□ -0.52
GABRB3-205ENST00000545868 HOXA7P31268 230 aaPredicted RBP11.78□□□□□ -0.52
GABRB3-205ENST00000545868 BACE1P56817 501 aa11.78□□□□□ -0.52
GABRB3-205ENST00000545868 ZKSCAN2Q63HK3 967 aa11.78□□□□□ -0.52
GABRB3-205ENST00000545868 EAF2Q96CJ1 260 aaPredicted RBP11.78□□□□□ -0.52
GABRB3-205ENST00000545868 ZNF512BQ96KM6 892 aaPredicted RBP11.78□□□□□ -0.52
GABRB3-205ENST00000545868 P2RX7Q99572 595 aaKnown RBP11.78□□□□□ -0.52
GABRB3-205ENST00000545868 DHX36Q9H2U1 1008 aaKnown RBP11.78□□□□□ -0.52
GABRB3-205ENST00000545868 AS3MTQ9HBK9 375 aa11.78□□□□□ -0.52
GABRB3-205ENST00000545868 ZBTB21Q9ULJ3 1066 aa11.78□□□□□ -0.52
GABRB3-205ENST00000545868 NOP58Q9Y2X3 529 aaKnown RBP11.78□□□□□ -0.52
GABRB3-205ENST00000545868 PRUNE2Q8WUY3 3088 aa11.78□□□□□ -0.52
GABRB3-205ENST00000545868 SURF6O75683 361 aaKnown RBP11.77□□□□□ -0.53
GABRB3-205ENST00000545868 HERVK_113P62684 666 aa11.77□□□□□ -0.53
GABRB3-205ENST00000545868 PABPC4Q13310 644 aaKnown RBP eCLIP11.77□□□□□ -0.53
GABRB3-205ENST00000545868 Q3C1V9 767 aa11.77□□□□□ -0.53
GABRB3-205ENST00000545868 CCDC158Q5M9N0 1113 aa11.77□□□□□ -0.53
GABRB3-205ENST00000545868 MAP3K21Q5TCX8 1036 aa11.77□□□□□ -0.53
GABRB3-205ENST00000545868 IL27Q8NEV9 243 aa11.77□□□□□ -0.53
GABRB3-205ENST00000545868 CCDC8Q9H0W5 538 aaPredicted RBP11.77□□□□□ -0.53
GABRB3-205ENST00000545868 PORCNQ9H237 461 aa11.77□□□□□ -0.53
GABRB3-205ENST00000545868 ANTXR1Q9H6X2 564 aa11.77□□□□□ -0.53
GABRB3-205ENST00000545868 RBPJLQ9UBG7 517 aa11.77□□□□□ -0.53
GABRB3-205ENST00000545868 CUL9Q8IWT3 2517 aa11.77□□□□□ -0.53
GABRB3-205ENST00000545868 USP17L10C9JJH3 530 aa11.76□□□□□ -0.53
GABRB3-205ENST00000545868 BAG3O95817 575 aa11.76□□□□□ -0.53
GABRB3-205ENST00000545868 CYP2B6P20813 491 aa11.76□□□□□ -0.53
GABRB3-205ENST00000545868 IRX3P78415 501 aaPredicted RBP11.76□□□□□ -0.53
GABRB3-205ENST00000545868 PADI6Q6TGC4 694 aa11.76□□□□□ -0.53
GABRB3-205ENST00000545868 MIGA1Q8NAN2 632 aa11.76□□□□□ -0.53
GABRB3-205ENST00000545868 TTC13Q8NBP0 860 aa11.76□□□□□ -0.53
GABRB3-205ENST00000545868 USP6NLQ92738 828 aa11.76□□□□□ -0.53
GABRB3-205ENST00000545868 LRCH3Q96II8 777 aa11.76□□□□□ -0.53
GABRB3-205ENST00000545868 NOL10Q9BSC4 688 aaKnown RBP11.76□□□□□ -0.53
GABRB3-205ENST00000545868 STAP2Q9UGK3 403 aa11.76□□□□□ -0.53
GABRB3-205ENST00000545868 NR2E3Q9Y5X4 410 aa11.76□□□□□ -0.53
GABRB3-205ENST00000545868 PFASO15067 1338 aa11.76□□□□□ -0.53
GABRB3-205ENST00000545868 RPTORQ8N122 1335 aa11.76□□□□□ -0.53
GABRB3-205ENST00000545868 CNMDO75829 334 aa11.75□□□□□ -0.53
GABRB3-205ENST00000545868 CYP7A1P22680 504 aa11.75□□□□□ -0.53
GABRB3-205ENST00000545868 ERVK-9P63128 1117 aa11.75□□□□□ -0.53
GABRB3-205ENST00000545868 ERVK-24P63145 666 aa11.75□□□□□ -0.53
GABRB3-205ENST00000545868 OS9Q13438 667 aaPredicted RBP11.75□□□□□ -0.53
GABRB3-205ENST00000545868 CCL14Q16627 93 aa11.75□□□□□ -0.53
GABRB3-205ENST00000545868 PPP4R3BQ5MIZ7 849 aa11.75□□□□□ -0.53
GABRB3-205ENST00000545868 CEP85Q6P2H3 762 aa11.75□□□□□ -0.53
GABRB3-205ENST00000545868 NECAB2Q7Z6G3 386 aa11.75□□□□□ -0.53
GABRB3-205ENST00000545868 FOXP4Q8IVH2 680 aaPredicted RBP11.75□□□□□ -0.53
GABRB3-205ENST00000545868 C7orf61Q8IZ16 206 aa11.75□□□□□ -0.53
GABRB3-205ENST00000545868 CRACR2BQ8N4Y2 399 aaPredicted RBP11.75□□□□□ -0.53
GABRB3-205ENST00000545868 FAM117AQ9C073 453 aa11.75□□□□□ -0.53
GABRB3-205ENST00000545868 OGDHLQ9ULD0 1010 aa11.75□□□□□ -0.53
GABRB3-205ENST00000545868 C19orf81C9J6K1 198 aa11.74□□□□□ -0.53
GABRB3-205ENST00000545868 IDH1O75874 414 aaKnown RBP11.74□□□□□ -0.53
GABRB3-205ENST00000545868 GH2P01242 217 aa11.74□□□□□ -0.53
GABRB3-205ENST00000545868 GUCY1A2P33402 732 aa11.74□□□□□ -0.53
GABRB3-205ENST00000545868 MORN1Q5T089 497 aa11.74□□□□□ -0.53
GABRB3-205ENST00000545868 TATDN1Q6P1N9 297 aa11.74□□□□□ -0.53
GABRB3-205ENST00000545868 ITPRIPQ8IWB1 547 aa11.74□□□□□ -0.53
GABRB3-205ENST00000545868 MAGEB6Q8N7X4 407 aa11.74□□□□□ -0.53
GABRB3-205ENST00000545868 ANKLE1Q8NAG6 615 aa11.74□□□□□ -0.53
GABRB3-205ENST00000545868 GPRC5AQ8NFJ5 357 aa11.74□□□□□ -0.53
GABRB3-205ENST00000545868 C12orf42Q96LP6 360 aa11.74□□□□□ -0.53
GABRB3-205ENST00000545868 PHOX2BQ99453 314 aa11.74□□□□□ -0.53
GABRB3-205ENST00000545868 GDF15Q99988 308 aa11.74□□□□□ -0.53
GABRB3-205ENST00000545868 HMX1Q9NP08 348 aaPredicted RBP11.74□□□□□ -0.53
GABRB3-205ENST00000545868 GINM1Q9NU53 330 aa11.74□□□□□ -0.53
GABRB3-205ENST00000545868 TMOD4Q9NZQ9 345 aa11.74□□□□□ -0.53
GABRB3-205ENST00000545868 DAXXQ9UER7 740 aaPredicted RBP11.74□□□□□ -0.53
GABRB3-205ENST00000545868 ZMYND8Q9ULU4 1186 aaPredicted RBP11.74□□□□□ -0.53
GABRB3-205ENST00000545868 CDH23Q9H251 3354 aa11.74□□□□□ -0.53
GABRB3-205ENST00000545868 A0A1W2PPC1 479 aa11.73□□□□□ -0.53
GABRB3-205ENST00000545868 HLA-DOAP06340 250 aa11.73□□□□□ -0.53
GABRB3-205ENST00000545868 XRCC5P13010 732 aaKnown RBP11.73□□□□□ -0.53
GABRB3-205ENST00000545868 CAPN2P17655 700 aa11.73□□□□□ -0.53
GABRB3-205ENST00000545868 SHMT1P34896 483 aa11.73□□□□□ -0.53
GABRB3-205ENST00000545868 PLCD1P51178 756 aa11.73□□□□□ -0.53
GABRB3-205ENST00000545868 CACNB2Q08289 660 aaPredicted RBP11.73□□□□□ -0.53
GABRB3-205ENST00000545868 ZYXQ15942 572 aaKnown RBP11.73□□□□□ -0.53
GABRB3-205ENST00000545868 GPR142Q7Z601 462 aa11.73□□□□□ -0.53
GABRB3-205ENST00000545868 ACER1Q8TDN7 264 aa11.73□□□□□ -0.53
GABRB3-205ENST00000545868 SOCS4Q8WXH5 440 aa11.73□□□□□ -0.53
GABRB3-205ENST00000545868 NUDT12Q9BQG2 462 aa11.73□□□□□ -0.53
GABRB3-205ENST00000545868 RIOK1Q9BRS2 568 aaKnown RBP11.73□□□□□ -0.53
GABRB3-205ENST00000545868 PAGR1Q9BTK6 254 aa11.73□□□□□ -0.53
GABRB3-205ENST00000545868 REPIN1Q9BWE0 567 aaKnown RBP11.73□□□□□ -0.53
GABRB3-205ENST00000545868 EXOC6BQ9Y2D4 811 aa11.73□□□□□ -0.53
GABRB3-205ENST00000545868 SYN1P17600 705 aa11.72□□□□□ -0.53
GABRB3-205ENST00000545868 CCND3P30281 292 aaPredicted RBP11.72□□□□□ -0.53
GABRB3-205ENST00000545868 LHX8Q68G74 356 aa11.72□□□□□ -0.53
GABRB3-205ENST00000545868 USP17L2Q6R6M4 530 aa11.72□□□□□ -0.53
GABRB3-205ENST00000545868 FTSJ3Q8IY81 847 aaKnown RBP11.72□□□□□ -0.53
GABRB3-205ENST00000545868 TMUB1Q9BVT8 246 aa11.72□□□□□ -0.53
GABRB3-205ENST00000545868 TRIM34Q9BYJ4 488 aa11.72□□□□□ -0.53
GABRB3-205ENST00000545868 NBPF3Q9H094 633 aa11.72□□□□□ -0.53
GABRB3-205ENST00000545868 EHD4Q9H223 541 aa11.72□□□□□ -0.53
GABRB3-205ENST00000545868 C11orf49Q9H6J7 331 aa11.72□□□□□ -0.53
GABRB3-205ENST00000545868 FLRT1Q9NZU1 646 aa11.72□□□□□ -0.53
GABRB3-205ENST00000545868 IGSF3O75054 1194 aa11.71□□□□□ -0.53
GABRB3-205ENST00000545868 COL6A1P12109 1028 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms