RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 KIAA2012Q0VF49 1180 aa6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 RTN1Q16799 776 aa6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 CCDC93Q567U6 631 aa6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 IFIT1BQ5T764 474 aaKnown RBP6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 SOGA3Q5TF21 947 aa6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 STRIP1Q5VSL9 837 aa6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 CAVIN1Q6NZI2 390 aaKnown RBP6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 HHIPL2Q6UWX4 724 aa6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 BRAPQ7Z569 592 aa6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 DEFB132Q7Z7B7 95 aa6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 USP48Q86UV5 1035 aa6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 TEX11Q8IYF3 940 aa6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 ENAHQ8N8S7 591 aaPredicted RBP6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 NKX2-3Q8TAU0 364 aa6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 GPT2Q8TD30 523 aa6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 C7orf43Q8WVR3 580 aa6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 C8orf76Q96K31 380 aa6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 ZNF396Q96N95 335 aaPredicted RBP6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 ZSCAN10Q96SZ4 725 aaPredicted RBP6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 RBM28Q9NW13 759 aaKnown RBP6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 PCDHB3Q9Y5E6 796 aa6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 ADAMTSL1Q8N6G6 1762 aa6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 SCN9AQ15858 1988 aa6.35□□□□□ -1.39
NPIPB3-214ENST00000545358 BRCA1P38398 1863 aaKnown RBP6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 GOLGA6L3A6NEY3 463 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 TSPY2A6NKD2 308 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 ECE2O60344 883 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 RANBP6O60518 1105 aaKnown RBP6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 FMNL1O95466 1100 aaPredicted RBP6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 POLR3DP05423 398 aaPredicted RBP6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 USP17L8P0C7I0 530 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 CYP2D6P10635 497 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 CDC27P30260 824 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 CHRNA5P30532 468 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 IARSP41252 1262 aaKnown RBP6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 HDLBPQ00341 1268 aaKnown RBP6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 SSRP1Q08945 709 aaKnown RBP6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 NTRK3Q16288 839 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 FOXD4L6Q3SYB3 417 aaPredicted RBP6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 OLFM4Q6UX06 510 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 FOXD4L3Q6VB84 417 aaPredicted RBP6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 C16orf86Q6ZW13 317 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 CATIPQ7Z7H3 387 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 FERMT3Q86UX7 667 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 TRIM22Q8IYM9 498 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 RTKN2Q8IZC4 609 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 CERS5Q8N5B7 392 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 TTLL6Q8N841 843 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 FBXO18Q8NFZ0 1043 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 TGFBRAP1Q8WUH2 860 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 TEKT1Q969V4 418 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 CHAMP1Q96JM3 812 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 PSMD1Q99460 953 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 MAP3K14Q99558 947 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 ALG1Q9BT22 464 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 MRIQ9BWK5 157 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 RNF26Q9BY78 433 aaPredicted RBP6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 GZF1Q9H116 711 aaPredicted RBP6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 VPS33BQ9H267 617 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 SENP2Q9HC62 589 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 GDPD2Q9HCC8 539 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 INCENPQ9NQS7 918 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 FAM217BQ9NTX9 383 aaPredicted RBP6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 TCP11L1Q9NUJ3 509 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 CFAP45Q9UL16 551 aa6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 TTF2Q9UNY4 1162 aaKnown RBP6.34□□□□□ -1.39
NPIPB3-214ENST00000545358 COL2A1P02458 1487 aaPredicted RBP6.34□□□□□ -1.4
NPIPB3-214ENST00000545358 MYH6P13533 1939 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 MYH8P13535 1937 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 GREB1LQ9C091 1923 aaPredicted RBP6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 USP17L3A6NCW0 530 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 USP17L4A6NCW7 530 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 PRDM1O75626 825 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 ZMYND10O75800 440 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 DEXIO95424 95 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 SLC10A3P09131 477 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 RXRAP19793 462 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 ADD1P35611 737 aaKnown RBP6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 KIF23Q02241 960 aaPredicted RBP6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 TRIM29Q14134 588 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 ZSCAN23Q3MJ62 389 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 DACT2Q5SW24 774 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 CCDC183Q5T5S1 534 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 USP17L1Q7RTZ2 530 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 TTC6Q86TZ1 520 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 DGKHQ86XP1 1220 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 RAB11FIP4Q86YS3 637 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 MAPKAPK5Q8IW41 473 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 FANCBQ8NB91 859 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 ZC3H15Q8WU90 426 aaKnown RBP6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 LEO1Q8WVC0 666 aaPredicted RBP6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 ANKS1AQ92625 1134 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 CCDC102AQ96A19 550 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 SPATA32Q96LK8 384 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 ZDHHC15Q96MV8 337 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 ZKSCAN3Q9BRR0 538 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 MYL10Q9BUA6 226 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 MTFR1LQ9H019 292 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 DBNDD1Q9H9R9 158 aa6.33□□□□□ -1.4
NPIPB3-214ENST00000545358 MKNK2Q9HBH9 465 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms