RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 NAT10Q9H0A0 1025 aaKnown RBP19.08■□□□□ 0.65
CHFR-224ENST00000545046 SH3GLB2Q9NR46 395 aa19.08■□□□□ 0.65
CHFR-224ENST00000545046 FAM13BQ9NYF5 915 aa19.08■□□□□ 0.65
CHFR-224ENST00000545046 GOLGA6L19H0YKK7 550 aa19.08■□□□□ 0.64
CHFR-224ENST00000545046 CALML3P27482 149 aa19.08■□□□□ 0.64
CHFR-224ENST00000545046 STRIP1Q5VSL9 837 aa19.08■□□□□ 0.64
CHFR-224ENST00000545046 FBXO2Q9UK22 296 aaPredicted RBP19.08■□□□□ 0.64
CHFR-224ENST00000545046 MTMR7Q9Y216 660 aa19.08■□□□□ 0.64
CHFR-224ENST00000545046 AP5Z1O43299 807 aa19.07■□□□□ 0.64
CHFR-224ENST00000545046 ECE2O60344 883 aa19.07■□□□□ 0.64
CHFR-224ENST00000545046 BMP15O95972 392 aa19.07■□□□□ 0.64
CHFR-224ENST00000545046 TOP1P11387 765 aaKnown RBP19.07■□□□□ 0.64
CHFR-224ENST00000545046 CDC42EP5Q6NZY7 148 aa19.07■□□□□ 0.64
CHFR-224ENST00000545046 C11orf57Q6ZUT1 292 aaPredicted RBP19.07■□□□□ 0.64
CHFR-224ENST00000545046 CEP57L1Q8IYX8 460 aa19.07■□□□□ 0.64
CHFR-224ENST00000545046 ERCC4Q92889 916 aaPredicted RBP19.07■□□□□ 0.64
CHFR-224ENST00000545046 DDX4Q9NQI0 724 aaKnown RBP19.07■□□□□ 0.64
CHFR-224ENST00000545046 KCNH3Q9ULD8 1083 aa19.07■□□□□ 0.64
CHFR-224ENST00000545046 SRPRBQ9Y5M8 271 aaKnown RBP19.07■□□□□ 0.64
CHFR-224ENST00000545046 ADAMTSL1Q8N6G6 1762 aa19.07■□□□□ 0.64
CHFR-224ENST00000545046 PALM3A6NDB9 673 aaPredicted RBP19.06■□□□□ 0.64
CHFR-224ENST00000545046 CRKP46108 304 aa19.06■□□□□ 0.64
CHFR-224ENST00000545046 CC2D2BQ6DHV5 1058 aa19.06■□□□□ 0.64
CHFR-224ENST00000545046 ZNF579Q8NAF0 562 aaKnown RBP19.06■□□□□ 0.64
CHFR-224ENST00000545046 MRIQ9BWK5 157 aa19.06■□□□□ 0.64
CHFR-224ENST00000545046 MORC2Q9Y6X9 1032 aaPredicted RBP19.06■□□□□ 0.64
CHFR-224ENST00000545046 SF3B2Q13435 895 aaKnown RBP19.06■□□□□ 0.64
CHFR-224ENST00000545046 IQCB1Q15051 598 aa19.06■□□□□ 0.64
CHFR-224ENST00000545046 NPY5RQ15761 445 aa19.06■□□□□ 0.64
CHFR-224ENST00000545046 TNFRSF25Q93038 417 aa19.06■□□□□ 0.64
CHFR-224ENST00000545046 CEP95Q96GE4 821 aa19.06■□□□□ 0.64
CHFR-224ENST00000545046 KCNQ5Q9NR82 932 aa19.06■□□□□ 0.64
CHFR-224ENST00000545046 SWAP70Q9UH65 585 aa19.06■□□□□ 0.64
CHFR-224ENST00000545046 ZKSCAN5Q9Y2L8 839 aa19.06■□□□□ 0.64
CHFR-224ENST00000545046 FAM205CA6NFA0 338 aa19.05■□□□□ 0.64
CHFR-224ENST00000545046 BECN2A8MW95 431 aa19.05■□□□□ 0.64
CHFR-224ENST00000545046 GABPAQ06546 454 aa19.05■□□□□ 0.64
CHFR-224ENST00000545046 EARS2Q5JPH6 523 aaKnown RBP19.05■□□□□ 0.64
CHFR-224ENST00000545046 APOBEC3HQ6NTF7 200 aaKnown RBP19.05■□□□□ 0.64
CHFR-224ENST00000545046 SUPT20HQ8NEM7 779 aa19.05■□□□□ 0.64
CHFR-224ENST00000545046 OSBPL5Q9H0X9 879 aaPredicted RBP19.05■□□□□ 0.64
CHFR-224ENST00000545046 KLRF2D3W0D1 207 aa19.05■□□□□ 0.64
CHFR-224ENST00000545046 HLA-DOAP06340 250 aa19.05■□□□□ 0.64
CHFR-224ENST00000545046 PARP1P09874 1014 aaKnown RBP19.05■□□□□ 0.64
CHFR-224ENST00000545046 ZDHHC15Q96MV8 337 aa19.05■□□□□ 0.64
CHFR-224ENST00000545046 SERPINB13Q9UIV8 391 aa19.05■□□□□ 0.64
CHFR-224ENST00000545046 HDLBPQ00341 1268 aaKnown RBP19.04■□□□□ 0.64
CHFR-224ENST00000545046 DACT2Q5SW24 774 aa19.04■□□□□ 0.64
CHFR-224ENST00000545046 KIAA0825Q8IV33 1275 aa19.04■□□□□ 0.64
CHFR-224ENST00000545046 CNNM3Q8NE01 707 aa19.04■□□□□ 0.64
CHFR-224ENST00000545046 C7orf43Q8WVR3 580 aa19.04■□□□□ 0.64
CHFR-224ENST00000545046 HOOK1Q9UJC3 728 aaKnown RBP19.04■□□□□ 0.64
CHFR-224ENST00000545046 SCN9AQ15858 1988 aa19.04■□□□□ 0.64
CHFR-224ENST00000545046 PLIN4Q96Q06 1357 aa19.04■□□□□ 0.64
CHFR-224ENST00000545046 VEGFAP15692 232 aaPredicted RBP19.03■□□□□ 0.64
CHFR-224ENST00000545046 BAG6P46379 1132 aa19.03■□□□□ 0.64
CHFR-224ENST00000545046 TRAPPC10P48553 1259 aa19.03■□□□□ 0.64
CHFR-224ENST00000545046 NOVP48745 357 aa19.03■□□□□ 0.64
CHFR-224ENST00000545046 NLRP12P59046 1061 aa19.03■□□□□ 0.64
CHFR-224ENST00000545046 SPECC1Q5M775 1068 aa19.03■□□□□ 0.64
CHFR-224ENST00000545046 TTC38Q5R3I4 469 aa19.03■□□□□ 0.64
CHFR-224ENST00000545046 KRBA2Q6ZNG9 492 aa19.03■□□□□ 0.64
CHFR-224ENST00000545046 BLIDQ8IZY5 108 aa19.03■□□□□ 0.64
CHFR-224ENST00000545046 CCDC148Q8NFR7 591 aa19.03■□□□□ 0.64
CHFR-224ENST00000545046 SPZ1Q9BXG8 430 aa19.03■□□□□ 0.64
CHFR-224ENST00000545046 GOLGA6L6A8MZA4 724 aa19.03■□□□□ 0.64
CHFR-224ENST00000545046 GOLGA8HP0CJ92 632 aa19.03■□□□□ 0.64
CHFR-224ENST00000545046 RBM5P52756 815 aaKnown RBP eCLIP19.03■□□□□ 0.64
CHFR-224ENST00000545046 AOC3Q16853 763 aa19.03■□□□□ 0.64
CHFR-224ENST00000545046 GPKOWQ92917 476 aaPredicted RBP eCLIP19.03■□□□□ 0.64
CHFR-224ENST00000545046 TRIM5Q9C035 493 aa19.03■□□□□ 0.64
CHFR-224ENST00000545046 PCDHA4Q9UN74 947 aa19.03■□□□□ 0.64
CHFR-224ENST00000545046 MYO3BQ8WXR4 1341 aa19.03■□□□□ 0.64
CHFR-224ENST00000545046 A0A087WWV3 80 aa19.02■□□□□ 0.64
CHFR-224ENST00000545046 LONRF3Q496Y0 759 aa19.02■□□□□ 0.64
CHFR-224ENST00000545046 PIK3AP1Q6ZUJ8 805 aa19.02■□□□□ 0.64
CHFR-224ENST00000545046 ELOA2Q8IYF1 753 aaPredicted RBP19.02■□□□□ 0.64
CHFR-224ENST00000545046 FAM177A1Q8N128 213 aaPredicted RBP19.02■□□□□ 0.64
CHFR-224ENST00000545046 MTMR4Q9NYA4 1195 aa19.02■□□□□ 0.64
CHFR-224ENST00000545046 CYTH3O43739 400 aa19.02■□□□□ 0.63
CHFR-224ENST00000545046 SMARCA1P28370 1054 aa19.02■□□□□ 0.63
CHFR-224ENST00000545046 GRIN1Q05586 938 aa19.02■□□□□ 0.63
CHFR-224ENST00000545046 KIAA2012Q0VF49 1180 aa19.02■□□□□ 0.63
CHFR-224ENST00000545046 ZNF174Q15697 407 aa19.02■□□□□ 0.63
CHFR-224ENST00000545046 GALNT17Q6IS24 598 aa19.02■□□□□ 0.63
CHFR-224ENST00000545046 FERMT2Q96AC1 680 aa19.02■□□□□ 0.63
CHFR-224ENST00000545046 CSRNP2Q9H175 543 aa19.02■□□□□ 0.63
CHFR-224ENST00000545046 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.02■□□□□ 0.63
CHFR-224ENST00000545046 ZNF646O15015 1829 aaPredicted RBP19.02■□□□□ 0.63
CHFR-224ENST00000545046 TPM3P06753 285 aa19.01■□□□□ 0.63
CHFR-224ENST00000545046 AKR1B1P15121 316 aa19.01■□□□□ 0.63
CHFR-224ENST00000545046 NOM1Q5C9Z4 860 aaKnown RBP19.01■□□□□ 0.63
CHFR-224ENST00000545046 HEATR3Q7Z4Q2 680 aa19.01■□□□□ 0.63
CHFR-224ENST00000545046 BARHL2Q9NY43 387 aa19.01■□□□□ 0.63
CHFR-224ENST00000545046 TUBE1Q9UJT0 475 aa19.01■□□□□ 0.63
CHFR-224ENST00000545046 BIN1O00499 593 aa19■□□□□ 0.63
CHFR-224ENST00000545046 SLC35G1Q2M3R5 365 aa19■□□□□ 0.63
CHFR-224ENST00000545046 GRIPAP1Q4V328 841 aa19■□□□□ 0.63
CHFR-224ENST00000545046 WWC2Q6AWC2 1192 aa19■□□□□ 0.63
CHFR-224ENST00000545046 USP17L2Q6R6M4 530 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms