RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 NOM1Q5C9Z4 860 aaKnown RBP8.9□□□□□ -0.98
CPSF7-224ENST00000544990 LCE2DQ5TA82 110 aaPredicted RBP8.9□□□□□ -0.98
CPSF7-224ENST00000544990 ANKRD45Q5TZF3 282 aa8.9□□□□□ -0.98
CPSF7-224ENST00000544990 FOXP4Q8IVH2 680 aaPredicted RBP8.9□□□□□ -0.98
CPSF7-224ENST00000544990 MAPKAPK5Q8IW41 473 aa8.9□□□□□ -0.98
CPSF7-224ENST00000544990 SCYL3Q8IZE3 742 aa8.9□□□□□ -0.98
CPSF7-224ENST00000544990 CFHR5Q9BXR6 569 aa8.9□□□□□ -0.98
CPSF7-224ENST00000544990 ZNF532Q9HCE3 1301 aa8.89□□□□□ -0.99
CPSF7-224ENST00000544990 PHF20L1A8MW92 1017 aa8.89□□□□□ -0.99
CPSF7-224ENST00000544990 IGF2BP3O00425 579 aaKnown RBP eCLIP8.89□□□□□ -0.99
CPSF7-224ENST00000544990 LRRFIP1Q32MZ4 808 aaKnown RBP8.89□□□□□ -0.99
CPSF7-224ENST00000544990 PUS10Q3MIT2 529 aaKnown RBP8.89□□□□□ -0.99
CPSF7-224ENST00000544990 MORN1Q5T089 497 aa8.89□□□□□ -0.99
CPSF7-224ENST00000544990 TTC6Q86TZ1 520 aa8.89□□□□□ -0.99
CPSF7-224ENST00000544990 CRACR2BQ8N4Y2 399 aaPredicted RBP8.89□□□□□ -0.99
CPSF7-224ENST00000544990 EDC3Q96F86 508 aaKnown RBP8.89□□□□□ -0.99
CPSF7-224ENST00000544990 POM121Q96HA1 1249 aa8.89□□□□□ -0.99
CPSF7-224ENST00000544990 CRNKL1Q9BZJ0 848 aaKnown RBP8.89□□□□□ -0.99
CPSF7-224ENST00000544990 DOCK1Q14185 1865 aa8.89□□□□□ -0.99
CPSF7-224ENST00000544990 GPR25O00155 361 aa8.88□□□□□ -0.99
CPSF7-224ENST00000544990 CXCL11O14625 94 aa8.88□□□□□ -0.99
CPSF7-224ENST00000544990 NR1I2O75469 434 aa8.88□□□□□ -0.99
CPSF7-224ENST00000544990 GLRX3O76003 335 aaKnown RBP8.88□□□□□ -0.99
CPSF7-224ENST00000544990 ADD2P35612 726 aa8.88□□□□□ -0.99
CPSF7-224ENST00000544990 UBE3CQ15386 1083 aa8.88□□□□□ -0.99
CPSF7-224ENST00000544990 TAF1CQ15572 869 aaPredicted RBP8.88□□□□□ -0.99
CPSF7-224ENST00000544990 RETREG3Q86VR2 466 aa8.88□□□□□ -0.99
CPSF7-224ENST00000544990 EXOC6Q8TAG9 804 aa8.88□□□□□ -0.99
CPSF7-224ENST00000544990 BRI3BPQ8WY22 251 aa8.88□□□□□ -0.99
CPSF7-224ENST00000544990 ARID3AQ99856 593 aa8.88□□□□□ -0.99
CPSF7-224ENST00000544990 PTPN18Q99952 460 aa8.88□□□□□ -0.99
CPSF7-224ENST00000544990 RIOK1Q9BRS2 568 aaKnown RBP8.88□□□□□ -0.99
CPSF7-224ENST00000544990 ZFYVE28Q9HCC9 887 aa8.88□□□□□ -0.99
CPSF7-224ENST00000544990 ZCCHC17Q9NP64 241 aaKnown RBP8.88□□□□□ -0.99
CPSF7-224ENST00000544990 SAP30BPQ9UHR5 308 aaKnown RBP8.88□□□□□ -0.99
CPSF7-224ENST00000544990 PALD1Q9ULE6 856 aa8.88□□□□□ -0.99
CPSF7-224ENST00000544990 KCNH4Q9UQ05 1017 aa8.88□□□□□ -0.99
CPSF7-224ENST00000544990 SLC27A5Q9Y2P5 690 aa8.88□□□□□ -0.99
CPSF7-224ENST00000544990 PCDHB3Q9Y5E6 796 aa8.88□□□□□ -0.99
CPSF7-224ENST00000544990 ZHX2Q9Y6X8 837 aa8.88□□□□□ -0.99
CPSF7-224ENST00000544990 ATAD5Q96QE3 1844 aa8.87□□□□□ -0.99
CPSF7-224ENST00000544990 TCRBV5S4A2TA0A5A2 114 aa8.87□□□□□ -0.99
CPSF7-224ENST00000544990 FAM196BA6NMK8 535 aa8.87□□□□□ -0.99
CPSF7-224ENST00000544990 FKTNO75072 461 aa8.87□□□□□ -0.99
CPSF7-224ENST00000544990 POLR3DP05423 398 aaPredicted RBP8.87□□□□□ -0.99
CPSF7-224ENST00000544990 PTPRAP18433 802 aa8.87□□□□□ -0.99
CPSF7-224ENST00000544990 MX1P20591 662 aa8.87□□□□□ -0.99
CPSF7-224ENST00000544990 CAP2P40123 477 aa8.87□□□□□ -0.99
CPSF7-224ENST00000544990 ABL2P42684 1182 aa8.87□□□□□ -0.99
CPSF7-224ENST00000544990 CTDSPL2Q05D32 466 aa8.87□□□□□ -0.99
CPSF7-224ENST00000544990 DGKZQ13574 1117 aa8.87□□□□□ -0.99
CPSF7-224ENST00000544990 FASTKD5Q7L8L6 764 aaKnown RBP8.87□□□□□ -0.99
CPSF7-224ENST00000544990 KBTBD3Q8NAB2 608 aa8.87□□□□□ -0.99
CPSF7-224ENST00000544990 PRR7Q8TB68 274 aa8.87□□□□□ -0.99
CPSF7-224ENST00000544990 ZNF296Q8WUU4 475 aaPredicted RBP8.87□□□□□ -0.99
CPSF7-224ENST00000544990 AS3MTQ9HBK9 375 aa8.87□□□□□ -0.99
CPSF7-224ENST00000544990 GDPD2Q9HCC8 539 aa8.87□□□□□ -0.99
CPSF7-224ENST00000544990 GINM1Q9NU53 330 aa8.87□□□□□ -0.99
CPSF7-224ENST00000544990 USP17L5A8MUK1 530 aa8.86□□□□□ -0.99
CPSF7-224ENST00000544990 BTBD19C9JJ37 291 aa8.86□□□□□ -0.99
CPSF7-224ENST00000544990 ZFYP08048 801 aaPredicted RBP8.86□□□□□ -0.99
CPSF7-224ENST00000544990 ASNSP08243 561 aa8.86□□□□□ -0.99
CPSF7-224ENST00000544990 SLURP2P0DP57 97 aa8.86□□□□□ -0.99
CPSF7-224ENST00000544990 CRHR2Q13324 411 aa8.86□□□□□ -0.99
CPSF7-224ENST00000544990 TSHZ3Q63HK5 1081 aa8.86□□□□□ -0.99
CPSF7-224ENST00000544990 CTU1Q7Z7A3 348 aaKnown RBP8.86□□□□□ -0.99
CPSF7-224ENST00000544990 ANKRD23Q86SG2 305 aa8.86□□□□□ -0.99
CPSF7-224ENST00000544990 METTL16Q86W50 562 aaKnown RBP8.86□□□□□ -0.99
CPSF7-224ENST00000544990 AMOTL1Q8IY63 956 aa8.86□□□□□ -0.99
CPSF7-224ENST00000544990 FAM43AQ8N2R8 423 aa8.86□□□□□ -0.99
CPSF7-224ENST00000544990 LCORLQ8N3X6 602 aa8.86□□□□□ -0.99
CPSF7-224ENST00000544990 SYMPKQ92797 1274 aaKnown RBP8.86□□□□□ -0.99
CPSF7-224ENST00000544990 EHD4Q9H223 541 aa8.86□□□□□ -0.99
CPSF7-224ENST00000544990 ARMT1Q9H993 441 aa8.86□□□□□ -0.99
CPSF7-224ENST00000544990 ATP8A2Q9NTI2 1148 aa8.86□□□□□ -0.99
CPSF7-224ENST00000544990 MCM9Q9NXL9 1143 aa8.86□□□□□ -0.99
CPSF7-224ENST00000544990 SERPINB13Q9UIV8 391 aa8.86□□□□□ -0.99
CPSF7-224ENST00000544990 AFG3L2Q9Y4W6 797 aa8.86□□□□□ -0.99
CPSF7-224ENST00000544990 SIPA1L1O43166 1804 aa8.86□□□□□ -0.99
CPSF7-224ENST00000544990 NAV1Q8NEY1 1877 aa8.85□□□□□ -0.99
CPSF7-224ENST00000544990 PHIPQ8WWQ0 1821 aa8.85□□□□□ -0.99
CPSF7-224ENST00000544990 CFAP99D6REC4 459 aa8.85□□□□□ -0.99
CPSF7-224ENST00000544990 RNF113AO15541 343 aaKnown RBP8.85□□□□□ -0.99
CPSF7-224ENST00000544990 MBD4O95243 580 aa8.85□□□□□ -0.99
CPSF7-224ENST00000544990 FMNL1O95466 1100 aaPredicted RBP8.85□□□□□ -0.99
CPSF7-224ENST00000544990 ARHGEF6Q15052 776 aa8.85□□□□□ -0.99
CPSF7-224ENST00000544990 PKN2Q16513 984 aaKnown RBP8.85□□□□□ -0.99
CPSF7-224ENST00000544990 SLC4A8Q2Y0W8 1093 aa8.85□□□□□ -0.99
CPSF7-224ENST00000544990 GADL1Q6ZQY3 521 aa8.85□□□□□ -0.99
CPSF7-224ENST00000544990 SMC5Q8IY18 1101 aa8.85□□□□□ -0.99
CPSF7-224ENST00000544990 ZNF280CQ8ND82 737 aa8.85□□□□□ -0.99
CPSF7-224ENST00000544990 PNMA1Q8ND90 353 aa8.85□□□□□ -0.99
CPSF7-224ENST00000544990 PI4K2BQ8TCG2 481 aa8.85□□□□□ -0.99
CPSF7-224ENST00000544990 SDR42E1Q8WUS8 393 aa8.85□□□□□ -0.99
CPSF7-224ENST00000544990 APPBP2Q92624 585 aa8.85□□□□□ -0.99
CPSF7-224ENST00000544990 ERO1AQ96HE7 468 aa8.85□□□□□ -0.99
CPSF7-224ENST00000544990 MCOLN1Q9GZU1 580 aa8.85□□□□□ -0.99
CPSF7-224ENST00000544990 R3HDMLQ9H3Y0 253 aa8.85□□□□□ -0.99
CPSF7-224ENST00000544990 DCP1AQ9NPI6 582 aaPredicted RBP8.85□□□□□ -0.99
CPSF7-224ENST00000544990 PTPRFP10586 1907 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms