RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 CERKLQ49MI3 558 aaPredicted RBP11.3□□□□□ -0.6
CIT-216ENST00000544872 SCYL3Q8IZE3 742 aa11.3□□□□□ -0.6
CIT-216ENST00000544872 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.3□□□□□ -0.6
CIT-216ENST00000544872 CCDC17Q96LX7 622 aa11.3□□□□□ -0.6
CIT-216ENST00000544872 ZCCHC17Q9NP64 241 aaKnown RBP11.3□□□□□ -0.6
CIT-216ENST00000544872 ARAP2Q8WZ64 1704 aa11.29□□□□□ -0.6
CIT-216ENST00000544872 PRKAB2O43741 272 aa11.29□□□□□ -0.6
CIT-216ENST00000544872 MAP3K10Q02779 954 aa11.29□□□□□ -0.6
CIT-216ENST00000544872 NMIQ13287 307 aaPredicted RBP11.29□□□□□ -0.6
CIT-216ENST00000544872 SNAPC2Q13487 334 aa11.29□□□□□ -0.6
CIT-216ENST00000544872 VGLL4Q14135 290 aa11.29□□□□□ -0.6
CIT-216ENST00000544872 SBK1Q52WX2 424 aa11.29□□□□□ -0.6
CIT-216ENST00000544872 IFNL3Q8IZI9 196 aa11.29□□□□□ -0.6
CIT-216ENST00000544872 PXYLP1Q8TE99 480 aa11.29□□□□□ -0.6
CIT-216ENST00000544872 ZKSCAN4Q969J2 545 aaPredicted RBP11.29□□□□□ -0.6
CIT-216ENST00000544872 COL26A1Q96A83 441 aa11.29□□□□□ -0.6
CIT-216ENST00000544872 RNF41Q9H4P4 317 aaPredicted RBP11.29□□□□□ -0.6
CIT-216ENST00000544872 ZNF112Q9UJU3 913 aa11.29□□□□□ -0.6
CIT-216ENST00000544872 CCDC171Q6TFL3 1326 aa11.29□□□□□ -0.6
CIT-216ENST00000544872 RAD50Q92878 1312 aa11.29□□□□□ -0.6
CIT-216ENST00000544872 USP17L5A8MUK1 530 aa11.28□□□□□ -0.6
CIT-216ENST00000544872 M0R2C6 588 aa11.28□□□□□ -0.6
CIT-216ENST00000544872 ZNF213O14771 459 aa11.28□□□□□ -0.6
CIT-216ENST00000544872 CAP2P40123 477 aa11.28□□□□□ -0.6
CIT-216ENST00000544872 NT5C2P49902 561 aa11.28□□□□□ -0.6
CIT-216ENST00000544872 IMMTQ16891 758 aaKnown RBP11.28□□□□□ -0.6
CIT-216ENST00000544872 AAK1Q2M2I8 961 aa11.28□□□□□ -0.6
CIT-216ENST00000544872 ABCB5Q2M3G0 1257 aa11.28□□□□□ -0.6
CIT-216ENST00000544872 NOL9Q5SY16 702 aaKnown RBP11.28□□□□□ -0.6
CIT-216ENST00000544872 C9orf50Q5SZB4 431 aa11.28□□□□□ -0.6
CIT-216ENST00000544872 C12orf60Q5U649 245 aa11.28□□□□□ -0.6
CIT-216ENST00000544872 SH3BP5LQ7L8J4 393 aa11.28□□□□□ -0.6
CIT-216ENST00000544872 FASTKD5Q7L8L6 764 aaKnown RBP11.28□□□□□ -0.6
CIT-216ENST00000544872 FAM227BQ96M60 508 aa11.28□□□□□ -0.6
CIT-216ENST00000544872 SH2D4AQ9H788 454 aa11.28□□□□□ -0.6
CIT-216ENST00000544872 C11orf16Q9NQ32 467 aa11.28□□□□□ -0.6
CIT-216ENST00000544872 TOMM22Q9NS69 142 aa11.28□□□□□ -0.6
CIT-216ENST00000544872 ZHX2Q9Y6X8 837 aa11.28□□□□□ -0.6
CIT-216ENST00000544872 MYO9BQ13459 2157 aa11.27□□□□□ -0.6
CIT-216ENST00000544872 SPDYE5A6NIY4 337 aa11.27□□□□□ -0.61
CIT-216ENST00000544872 GSG1L2A8MUP6 293 aa11.27□□□□□ -0.61
CIT-216ENST00000544872 CXCL11O14625 94 aa11.27□□□□□ -0.61
CIT-216ENST00000544872 CDC45O75419 566 aa11.27□□□□□ -0.61
CIT-216ENST00000544872 PCP11498 1178 aaKnown RBP11.27□□□□□ -0.61
CIT-216ENST00000544872 BMP1P13497 986 aa11.27□□□□□ -0.61
CIT-216ENST00000544872 IGFBP4P22692 258 aa11.27□□□□□ -0.61
CIT-216ENST00000544872 TRDNQ13061 729 aa11.27□□□□□ -0.61
CIT-216ENST00000544872 PABPC4Q13310 644 aaKnown RBP eCLIP11.27□□□□□ -0.61
CIT-216ENST00000544872 PPIL2Q13356 520 aa11.27□□□□□ -0.61
CIT-216ENST00000544872 ALX1Q15699 326 aa11.27□□□□□ -0.61
CIT-216ENST00000544872 LRRC26Q2I0M4 334 aa11.27□□□□□ -0.61
CIT-216ENST00000544872 SLFNL1Q499Z3 407 aa11.27□□□□□ -0.61
CIT-216ENST00000544872 AKNAD1Q5T1N1 836 aa11.27□□□□□ -0.61
CIT-216ENST00000544872 CTR9Q6PD62 1173 aa11.27□□□□□ -0.61
CIT-216ENST00000544872 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.27□□□□□ -0.61
CIT-216ENST00000544872 METTL16Q86W50 562 aaKnown RBP11.27□□□□□ -0.61
CIT-216ENST00000544872 SEC62Q99442 399 aaKnown RBP11.27□□□□□ -0.61
CIT-216ENST00000544872 TMOD4Q9NZQ9 345 aa11.27□□□□□ -0.61
CIT-216ENST00000544872 PFASO15067 1338 aa11.27□□□□□ -0.61
CIT-216ENST00000544872 A0A1B0GUL6 1792 aa11.26□□□□□ -0.61
CIT-216ENST00000544872 PHF20L1A8MW92 1017 aa11.26□□□□□ -0.61
CIT-216ENST00000544872 KRT37O76014 449 aa11.26□□□□□ -0.61
CIT-216ENST00000544872 HSPD1P10809 573 aaKnown RBP11.26□□□□□ -0.61
CIT-216ENST00000544872 GSPT1P15170 499 aaKnown RBP11.26□□□□□ -0.61
CIT-216ENST00000544872 CHMLP26374 656 aa11.26□□□□□ -0.61
CIT-216ENST00000544872 INPP5BP32019 993 aa11.26□□□□□ -0.61
CIT-216ENST00000544872 PLCD1P51178 756 aa11.26□□□□□ -0.61
CIT-216ENST00000544872 RAB3GAP1Q15042 981 aa11.26□□□□□ -0.61
CIT-216ENST00000544872 CSPP1Q1MSJ5 1256 aa11.26□□□□□ -0.61
CIT-216ENST00000544872 TMEM179Q6ZVK1 233 aa11.26□□□□□ -0.61
CIT-216ENST00000544872 CDAN1Q8IWY9 1227 aa11.26□□□□□ -0.61
CIT-216ENST00000544872 FBXL18Q96ME1 805 aa11.26□□□□□ -0.61
CIT-216ENST00000544872 FEZ1Q99689 392 aa11.26□□□□□ -0.61
CIT-216ENST00000544872 DSCC1Q9BVC3 393 aa11.26□□□□□ -0.61
CIT-216ENST00000544872 ZNF576Q9H609 170 aa11.26□□□□□ -0.61
CIT-216ENST00000544872 ARHGEF10LQ9HCE6 1279 aa11.26□□□□□ -0.61
CIT-216ENST00000544872 U3KPZ7 1027 aaPredicted RBP11.26□□□□□ -0.61
CIT-216ENST00000544872 DDX60LQ5H9U9 1706 aaKnown RBP11.26□□□□□ -0.61
CIT-216ENST00000544872 A0A0D9SFI3 127 aa11.25□□□□□ -0.61
CIT-216ENST00000544872 PRR33A8MZF0 331 aa11.25□□□□□ -0.61
CIT-216ENST00000544872 C19orf81C9J6K1 198 aa11.25□□□□□ -0.61
CIT-216ENST00000544872 TNPO2O14787 897 aaKnown RBP11.25□□□□□ -0.61
CIT-216ENST00000544872 TSPY3P0CV98 308 aa11.25□□□□□ -0.61
CIT-216ENST00000544872 TSPY8P0CW00 308 aa11.25□□□□□ -0.61
CIT-216ENST00000544872 PTPRAP18433 802 aa11.25□□□□□ -0.61
CIT-216ENST00000544872 CDK8P49336 464 aa11.25□□□□□ -0.61
CIT-216ENST00000544872 USP14P54578 494 aa11.25□□□□□ -0.61
CIT-216ENST00000544872 PPARAQ07869 468 aa11.25□□□□□ -0.61
CIT-216ENST00000544872 RNF20Q5VTR2 975 aa11.25□□□□□ -0.61
CIT-216ENST00000544872 TATDN1Q6P1N9 297 aa11.25□□□□□ -0.61
CIT-216ENST00000544872 CCDC129Q6ZRS4 1044 aa11.25□□□□□ -0.61
CIT-216ENST00000544872 MFSD6Q6ZSS7 791 aa11.25□□□□□ -0.61
CIT-216ENST00000544872 C16orf86Q6ZW13 317 aa11.25□□□□□ -0.61
CIT-216ENST00000544872 ZNF280CQ8ND82 737 aa11.25□□□□□ -0.61
CIT-216ENST00000544872 KANSL2Q9H9L4 492 aa11.25□□□□□ -0.61
CIT-216ENST00000544872 HMX1Q9NP08 348 aaPredicted RBP11.25□□□□□ -0.61
CIT-216ENST00000544872 CXXC1Q9P0U4 656 aaPredicted RBP11.25□□□□□ -0.61
CIT-216ENST00000544872 PSME4Q14997 1843 aa11.24□□□□□ -0.61
CIT-216ENST00000544872 TRIM75PA6NK02 468 aa11.24□□□□□ -0.61
CIT-216ENST00000544872 TSPY2A6NKD2 308 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms