RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 MTMR4Q9NYA4 1195 aa18.46■□□□□ 0.55
SPDEF-202ENST00000544425 ECM29Q5VYK3 1845 aa18.46■□□□□ 0.55
SPDEF-202ENST00000544425 A0A1B0GVL5 298 aa18.46■□□□□ 0.54
SPDEF-202ENST00000544425 YDJCA8MPS7 323 aa18.46■□□□□ 0.54
SPDEF-202ENST00000544425 CUTAO60888 179 aa18.46■□□□□ 0.54
SPDEF-202ENST00000544425 NDUFA8P51970 172 aa18.46■□□□□ 0.54
SPDEF-202ENST00000544425 NPY5RQ15761 445 aa18.46■□□□□ 0.54
SPDEF-202ENST00000544425 SOGA3Q5TF21 947 aa18.46■□□□□ 0.54
SPDEF-202ENST00000544425 SASS6Q6UVJ0 657 aa18.46■□□□□ 0.54
SPDEF-202ENST00000544425 CEP131Q9UPN4 1083 aa18.46■□□□□ 0.54
SPDEF-202ENST00000544425 FOCADQ5VW36 1801 aa18.45■□□□□ 0.54
SPDEF-202ENST00000544425 CAVIN2O95810 425 aa18.45■□□□□ 0.54
SPDEF-202ENST00000544425 MARCKSP29966 332 aaPredicted RBP18.45■□□□□ 0.54
SPDEF-202ENST00000544425 NFIAQ12857 509 aa18.45■□□□□ 0.54
SPDEF-202ENST00000544425 TNFRSF25Q93038 417 aa18.45■□□□□ 0.54
SPDEF-202ENST00000544425 CCDC17Q96LX7 622 aa18.45■□□□□ 0.54
SPDEF-202ENST00000544425 SPZ1Q9BXG8 430 aa18.45■□□□□ 0.54
SPDEF-202ENST00000544425 CABP5Q9NP86 173 aa18.45■□□□□ 0.54
SPDEF-202ENST00000544425 CALML3P27482 149 aa18.44■□□□□ 0.54
SPDEF-202ENST00000544425 SHMT1P34896 483 aa18.44■□□□□ 0.54
SPDEF-202ENST00000544425 RBM5P52756 815 aaKnown RBP eCLIP18.44■□□□□ 0.54
SPDEF-202ENST00000544425 PPP4R3BQ5MIZ7 849 aa18.44■□□□□ 0.54
SPDEF-202ENST00000544425 TIGD1Q96MW7 591 aa18.44■□□□□ 0.54
SPDEF-202ENST00000544425 HPSEQ9Y251 543 aa18.44■□□□□ 0.54
SPDEF-202ENST00000544425 MRVI1Q9Y6F6 885 aa18.44■□□□□ 0.54
SPDEF-202ENST00000544425 PARP1P09874 1014 aaKnown RBP18.43■□□□□ 0.54
SPDEF-202ENST00000544425 KRI1Q8N9T8 703 aaKnown RBP18.43■□□□□ 0.54
SPDEF-202ENST00000544425 FAM198AQ9UFP1 575 aa18.43■□□□□ 0.54
SPDEF-202ENST00000544425 KLRF2D3W0D1 207 aa18.43■□□□□ 0.54
SPDEF-202ENST00000544425 CYTH3O43739 400 aa18.43■□□□□ 0.54
SPDEF-202ENST00000544425 AKR1B1P15121 316 aa18.43■□□□□ 0.54
SPDEF-202ENST00000544425 PTPREP23469 700 aa18.43■□□□□ 0.54
SPDEF-202ENST00000544425 NLRP5P59047 1200 aa18.43■□□□□ 0.54
SPDEF-202ENST00000544425 RESP18Q5W5W9 173 aa18.43■□□□□ 0.54
SPDEF-202ENST00000544425 GALNT17Q6IS24 598 aa18.43■□□□□ 0.54
SPDEF-202ENST00000544425 FAM200AQ8TCP9 573 aa18.43■□□□□ 0.54
SPDEF-202ENST00000544425 PI4KBQ9UBF8 816 aa18.43■□□□□ 0.54
SPDEF-202ENST00000544425 ZNF202O95125 648 aa18.42■□□□□ 0.54
SPDEF-202ENST00000544425 BMP15O95972 392 aa18.42■□□□□ 0.54
SPDEF-202ENST00000544425 VIL1P09327 827 aaKnown RBP18.42■□□□□ 0.54
SPDEF-202ENST00000544425 PFKFB1P16118 471 aa18.42■□□□□ 0.54
SPDEF-202ENST00000544425 SLC35G1Q2M3R5 365 aa18.42■□□□□ 0.54
SPDEF-202ENST00000544425 RSBN1LQ6PCB5 846 aaPredicted RBP18.42■□□□□ 0.54
SPDEF-202ENST00000544425 SHC4Q6S5L8 630 aa18.42■□□□□ 0.54
SPDEF-202ENST00000544425 FOXP4Q8IVH2 680 aaPredicted RBP18.42■□□□□ 0.54
SPDEF-202ENST00000544425 ZFPM1Q8IX07 1006 aa18.42■□□□□ 0.54
SPDEF-202ENST00000544425 ZNF579Q8NAF0 562 aaKnown RBP18.42■□□□□ 0.54
SPDEF-202ENST00000544425 NOL7Q9UMY1 257 aaKnown RBP18.42■□□□□ 0.54
SPDEF-202ENST00000544425 PCDHB6Q9Y5E3 794 aa18.42■□□□□ 0.54
SPDEF-202ENST00000544425 PCDHAC2Q9Y5I4 1007 aa18.42■□□□□ 0.54
SPDEF-202ENST00000544425 MYH1P12882 1939 aa18.42■□□□□ 0.54
SPDEF-202ENST00000544425 ENTPD3O75355 529 aa18.41■□□□□ 0.54
SPDEF-202ENST00000544425 TTLL1O95922 423 aa18.41■□□□□ 0.54
SPDEF-202ENST00000544425 VEGFAP15692 232 aaPredicted RBP18.41■□□□□ 0.54
SPDEF-202ENST00000544425 TRAPPC10P48553 1259 aa18.41■□□□□ 0.54
SPDEF-202ENST00000544425 METTL16Q86W50 562 aaKnown RBP18.41■□□□□ 0.54
SPDEF-202ENST00000544425 SDF4Q9BRK5 362 aa18.41■□□□□ 0.54
SPDEF-202ENST00000544425 PIM2Q9P1W9 311 aa18.41■□□□□ 0.54
SPDEF-202ENST00000544425 SRPRBQ9Y5M8 271 aaKnown RBP18.41■□□□□ 0.54
SPDEF-202ENST00000544425 TRIM75PA6NK02 468 aa18.41■□□□□ 0.54
SPDEF-202ENST00000544425 SNHG28P0DPA3 235 aa18.41■□□□□ 0.54
SPDEF-202ENST00000544425 CFAP100Q494V2 611 aa18.41■□□□□ 0.54
SPDEF-202ENST00000544425 LARGE2Q8N3Y3 721 aa18.41■□□□□ 0.54
SPDEF-202ENST00000544425 TRIM44Q96DX7 344 aaPredicted RBP18.41■□□□□ 0.54
SPDEF-202ENST00000544425 GMLQ99445 158 aa18.41■□□□□ 0.54
SPDEF-202ENST00000544425 FBXO2Q9UK22 296 aaPredicted RBP18.41■□□□□ 0.54
SPDEF-202ENST00000544425 SYKP43405 635 aa18.4■□□□□ 0.54
SPDEF-202ENST00000544425 EARS2Q5JPH6 523 aaKnown RBP18.4■□□□□ 0.54
SPDEF-202ENST00000544425 ELOA2Q8IYF1 753 aaPredicted RBP18.4■□□□□ 0.54
SPDEF-202ENST00000544425 FAM43AQ8N2R8 423 aa18.4■□□□□ 0.54
SPDEF-202ENST00000544425 DAGLBQ8NCG7 672 aa18.4■□□□□ 0.54
SPDEF-202ENST00000544425 CCDC148Q8NFR7 591 aa18.4■□□□□ 0.54
SPDEF-202ENST00000544425 MTFR1LQ9H019 292 aa18.4■□□□□ 0.54
SPDEF-202ENST00000544425 BARHL2Q9NY43 387 aa18.4■□□□□ 0.54
SPDEF-202ENST00000544425 PCDHA4Q9UN74 947 aa18.4■□□□□ 0.54
SPDEF-202ENST00000544425 ZNF646O15015 1829 aaPredicted RBP18.39■□□□□ 0.54
SPDEF-202ENST00000544425 PDHBP11177 359 aa18.39■□□□□ 0.54
SPDEF-202ENST00000544425 POLD1P28340 1107 aa18.39■□□□□ 0.54
SPDEF-202ENST00000544425 ANO6Q4KMQ2 910 aa18.39■□□□□ 0.54
SPDEF-202ENST00000544425 ASPRV1Q53RT3 343 aa18.39■□□□□ 0.54
SPDEF-202ENST00000544425 HS1BP3Q53T59 392 aa18.39■□□□□ 0.54
SPDEF-202ENST00000544425 USP17L2Q6R6M4 530 aa18.39■□□□□ 0.54
SPDEF-202ENST00000544425 BLIDQ8IZY5 108 aa18.39■□□□□ 0.54
SPDEF-202ENST00000544425 PRMT6Q96LA8 375 aaPredicted RBP18.39■□□□□ 0.54
SPDEF-202ENST00000544425 CLIC6Q96NY7 704 aa18.39■□□□□ 0.54
SPDEF-202ENST00000544425 RIOX1Q9H6W3 641 aa18.39■□□□□ 0.54
SPDEF-202ENST00000544425 SCN9AQ15858 1988 aa18.39■□□□□ 0.54
SPDEF-202ENST00000544425 DDTLA6NHG4 134 aaPredicted RBP18.39■□□□□ 0.53
SPDEF-202ENST00000544425 TATDN1Q6P1N9 297 aa18.39■□□□□ 0.53
SPDEF-202ENST00000544425 SH3BP5LQ7L8J4 393 aa18.39■□□□□ 0.53
SPDEF-202ENST00000544425 ZNF277Q9NRM2 450 aaPredicted RBP18.39■□□□□ 0.53
SPDEF-202ENST00000544425 KIAA1468Q9P260 1216 aa18.39■□□□□ 0.53
SPDEF-202ENST00000544425 CLIP2Q9UDT6 1046 aa18.39■□□□□ 0.53
SPDEF-202ENST00000544425 HDAC9Q9UKV0 1011 aa18.39■□□□□ 0.53
SPDEF-202ENST00000544425 ATRNL1Q5VV63 1379 aa18.39■□□□□ 0.53
SPDEF-202ENST00000544425 USP17L5A8MUK1 530 aa18.38■□□□□ 0.53
SPDEF-202ENST00000544425 M0R2N6 131 aa18.38■□□□□ 0.53
SPDEF-202ENST00000544425 ZBTB7AO95365 584 aa18.38■□□□□ 0.53
SPDEF-202ENST00000544425 COL2A1P02458 1487 aaPredicted RBP18.38■□□□□ 0.53
SPDEF-202ENST00000544425 GOLGA8HP0CJ92 632 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms