RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 SEC31BQ9NQW1 1179 aa20.49■□□□□ 0.87
CCT4-204ENST00000544079 ODF2LQ9ULJ1 636 aa20.49■□□□□ 0.87
CCT4-204ENST00000544079 TMEM2Q9UHN6 1383 aa20.49■□□□□ 0.87
CCT4-204ENST00000544079 AFDNP55196 1824 aaKnown RBP20.49■□□□□ 0.87
CCT4-204ENST00000544079 ENC1O14682 589 aa20.48■□□□□ 0.87
CCT4-204ENST00000544079 ZNF213O14771 459 aa20.48■□□□□ 0.87
CCT4-204ENST00000544079 TOB1P50616 345 aaPredicted RBP20.48■□□□□ 0.87
CCT4-204ENST00000544079 COPB1P53618 953 aaKnown RBP20.48■□□□□ 0.87
CCT4-204ENST00000544079 CCDC40Q4G0X9 1142 aa20.48■□□□□ 0.87
CCT4-204ENST00000544079 SPECC1Q5M775 1068 aa20.48■□□□□ 0.87
CCT4-204ENST00000544079 CCDC122Q5T0U0 273 aa20.48■□□□□ 0.87
CCT4-204ENST00000544079 LRCH2Q5VUJ6 765 aa20.48■□□□□ 0.87
CCT4-204ENST00000544079 MPRIPQ6WCQ1 1025 aa20.48■□□□□ 0.87
CCT4-204ENST00000544079 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.48■□□□□ 0.87
CCT4-204ENST00000544079 TEX11Q8IYF3 940 aa20.48■□□□□ 0.87
CCT4-204ENST00000544079 GRAMD1CQ8IYS0 662 aa20.48■□□□□ 0.87
CCT4-204ENST00000544079 OR8K1Q8NGG5 319 aa20.48■□□□□ 0.87
CCT4-204ENST00000544079 GDAP1L1Q96MZ0 367 aa20.48■□□□□ 0.87
CCT4-204ENST00000544079 DNAJC7Q99615 494 aa20.48■□□□□ 0.87
CCT4-204ENST00000544079 RGPD8O14715 1765 aaPredicted RBP20.48■□□□□ 0.87
CCT4-204ENST00000544079 HAND2P61296 217 aa20.48■□□□□ 0.87
CCT4-204ENST00000544079 TTMPQ5BVD1 217 aa20.48■□□□□ 0.87
CCT4-204ENST00000544079 APOA5Q6Q788 366 aa20.48■□□□□ 0.87
CCT4-204ENST00000544079 RAB11FIP4Q86YS3 637 aa20.48■□□□□ 0.87
CCT4-204ENST00000544079 FMNL3Q8IVF7 1028 aa20.48■□□□□ 0.87
CCT4-204ENST00000544079 GSPT2Q8IYD1 628 aaKnown RBP20.48■□□□□ 0.87
CCT4-204ENST00000544079 CD248Q9HCU0 757 aa20.48■□□□□ 0.87
CCT4-204ENST00000544079 HERVK_113P62684 666 aa20.47■□□□□ 0.87
CCT4-204ENST00000544079 IQCA1Q86XH1 822 aa20.47■□□□□ 0.87
CCT4-204ENST00000544079 C3orf20Q8ND61 904 aa20.47■□□□□ 0.87
CCT4-204ENST00000544079 N4BP2L2Q92802 583 aaPredicted RBP20.47■□□□□ 0.87
CCT4-204ENST00000544079 TMEM87BQ96K49 555 aa20.47■□□□□ 0.87
CCT4-204ENST00000544079 AATFQ9NY61 560 aaKnown RBP eCLIP20.47■□□□□ 0.87
CCT4-204ENST00000544079 BCCIPQ9P287 314 aaKnown RBP eCLIP20.47■□□□□ 0.87
CCT4-204ENST00000544079 UBN2Q6ZU65 1347 aa20.47■□□□□ 0.87
CCT4-204ENST00000544079 PHRF1Q9P1Y6 1649 aaKnown RBP20.47■□□□□ 0.87
CCT4-204ENST00000544079 RNF225M0QZC1 329 aaPredicted RBP20.47■□□□□ 0.87
CCT4-204ENST00000544079 ZMYND10O75800 440 aa20.47■□□□□ 0.87
CCT4-204ENST00000544079 MMP1P03956 469 aa20.47■□□□□ 0.87
CCT4-204ENST00000544079 PRLRP16471 622 aa20.47■□□□□ 0.87
CCT4-204ENST00000544079 GRIN1Q05586 938 aa20.47■□□□□ 0.87
CCT4-204ENST00000544079 C1orf141Q5JVX7 400 aa20.47■□□□□ 0.87
CCT4-204ENST00000544079 CEP85LQ5SZL2 805 aa20.47■□□□□ 0.87
CCT4-204ENST00000544079 NAA35Q5VZE5 725 aa20.47■□□□□ 0.87
CCT4-204ENST00000544079 NEUROD6Q96NK8 337 aa20.47■□□□□ 0.87
CCT4-204ENST00000544079 PURBQ96QR8 312 aaKnown RBP20.47■□□□□ 0.87
CCT4-204ENST00000544079 TRIM10Q9UDY6 481 aa20.47■□□□□ 0.87
CCT4-204ENST00000544079 PRAMEF22A3QJZ6 481 aa20.46■□□□□ 0.87
CCT4-204ENST00000544079 SRGAP2O75044 1071 aa20.46■□□□□ 0.87
CCT4-204ENST00000544079 SCP2P22307 547 aa20.46■□□□□ 0.87
CCT4-204ENST00000544079 IL15P40933 162 aaPredicted RBP20.46■□□□□ 0.87
CCT4-204ENST00000544079 STX17P56962 302 aa20.46■□□□□ 0.87
CCT4-204ENST00000544079 DPYDQ12882 1025 aa20.46■□□□□ 0.87
CCT4-204ENST00000544079 PDCLQ13371 301 aa20.46■□□□□ 0.87
CCT4-204ENST00000544079 KLHL10Q6JEL2 608 aa20.46■□□□□ 0.87
CCT4-204ENST00000544079 ATG9AQ7Z3C6 839 aa20.46■□□□□ 0.87
CCT4-204ENST00000544079 CAPZA3Q96KX2 299 aa20.46■□□□□ 0.87
CCT4-204ENST00000544079 CHP1Q99653 195 aa20.46■□□□□ 0.87
CCT4-204ENST00000544079 RBM28Q9NW13 759 aaKnown RBP20.46■□□□□ 0.87
CCT4-204ENST00000544079 RWDD2AQ9UIY3 292 aa20.46■□□□□ 0.87
CCT4-204ENST00000544079 NID2Q14112 1375 aa20.46■□□□□ 0.87
CCT4-204ENST00000544079 LSP1P33241 339 aa20.46■□□□□ 0.87
CCT4-204ENST00000544079 CDR1P51861 262 aa20.46■□□□□ 0.87
CCT4-204ENST00000544079 TAX1BP1Q86VP1 789 aa20.46■□□□□ 0.87
CCT4-204ENST00000544079 FAXDC2Q96IV6 333 aa20.46■□□□□ 0.87
CCT4-204ENST00000544079 STRN4Q9NRL3 753 aa20.46■□□□□ 0.87
CCT4-204ENST00000544079 GOLGA6L7A0A1B0GV03 622 aa20.45■□□□□ 0.86
CCT4-204ENST00000544079 A0A1W2PQC6 194 aa20.45■□□□□ 0.86
CCT4-204ENST00000544079 PDE2AO00408 941 aaPredicted RBP20.45■□□□□ 0.86
CCT4-204ENST00000544079 FMNL1O95466 1100 aaPredicted RBP20.45■□□□□ 0.86
CCT4-204ENST00000544079 SSRP1Q08945 709 aaKnown RBP20.45■□□□□ 0.86
CCT4-204ENST00000544079 TTF1Q15361 905 aaPredicted RBP20.45■□□□□ 0.86
CCT4-204ENST00000544079 SGMS1Q86VZ5 419 aa20.45■□□□□ 0.86
CCT4-204ENST00000544079 CD302Q8IX05 232 aa20.45■□□□□ 0.86
CCT4-204ENST00000544079 ZNF473Q8WTR7 871 aaKnown RBP20.45■□□□□ 0.86
CCT4-204ENST00000544079 PHKBQ93100 1093 aa20.45■□□□□ 0.86
CCT4-204ENST00000544079 PAGE5Q96GU1 130 aa20.45■□□□□ 0.86
CCT4-204ENST00000544079 ABCC12Q96J65 1359 aa20.45■□□□□ 0.86
CCT4-204ENST00000544079 ZBTB43O43298 467 aa20.44■□□□□ 0.86
CCT4-204ENST00000544079 TSR1Q2NL82 804 aaKnown RBP20.44■□□□□ 0.86
CCT4-204ENST00000544079 HSP90AB3PQ58FF7 597 aa20.44■□□□□ 0.86
CCT4-204ENST00000544079 C6orf89Q6UWU4 347 aa20.44■□□□□ 0.86
CCT4-204ENST00000544079 CCDC13Q8IYE1 715 aa20.44■□□□□ 0.86
CCT4-204ENST00000544079 XAGE3Q8WTP9 111 aa20.44■□□□□ 0.86
CCT4-204ENST00000544079 APPBP2Q92624 585 aa20.44■□□□□ 0.86
CCT4-204ENST00000544079 ARL8AQ96BM9 186 aa20.44■□□□□ 0.86
CCT4-204ENST00000544079 RANBP6O60518 1105 aaKnown RBP20.44■□□□□ 0.86
CCT4-204ENST00000544079 CYLC1P35663 651 aaPredicted RBP20.44■□□□□ 0.86
CCT4-204ENST00000544079 CCT6AP40227 531 aaKnown RBP20.44■□□□□ 0.86
CCT4-204ENST00000544079 CEBPAP49715 358 aaPredicted RBP20.44■□□□□ 0.86
CCT4-204ENST00000544079 CASP7P55210 303 aa20.44■□□□□ 0.86
CCT4-204ENST00000544079 MEA1Q16626 185 aa20.44■□□□□ 0.86
CCT4-204ENST00000544079 TCP11X2Q5H9J9 407 aa20.44■□□□□ 0.86
CCT4-204ENST00000544079 UBR1Q8IWV7 1749 aa20.44■□□□□ 0.86
CCT4-204ENST00000544079 STRCQ7RTU9 1775 aa20.43■□□□□ 0.86
CCT4-204ENST00000544079 PPP1R37O75864 691 aa20.43■□□□□ 0.86
CCT4-204ENST00000544079 IRX1P78414 480 aaPredicted RBP20.43■□□□□ 0.86
CCT4-204ENST00000544079 SNCBQ16143 134 aa20.43■□□□□ 0.86
CCT4-204ENST00000544079 PTGISQ16647 500 aa20.43■□□□□ 0.86
CCT4-204ENST00000544079 C11orf91Q3C1V1 193 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms