RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 VPS54Q9P1Q0 977 aa17.04■□□□□ 0.32
CHD4-210ENST00000544040 TNNI1P19237 187 aa17.04■□□□□ 0.32
CHD4-210ENST00000544040 FAF1Q9UNN5 650 aaPredicted RBP17.04■□□□□ 0.32
CHD4-210ENST00000544040 PARP3Q9Y6F1 533 aa17.04■□□□□ 0.32
CHD4-210ENST00000544040 SNAPC4Q5SXM2 1469 aa17.04■□□□□ 0.32
CHD4-210ENST00000544040 KRT81Q14533 505 aa17.04■□□□□ 0.32
CHD4-210ENST00000544040 PPP2R5AQ15172 486 aa17.04■□□□□ 0.32
CHD4-210ENST00000544040 NONOQ15233 471 aaKnown RBP eCLIP17.04■□□□□ 0.32
CHD4-210ENST00000544040 P3H4Q92791 437 aa17.04■□□□□ 0.32
CHD4-210ENST00000544040 CYP2J2P51589 502 aa17.03■□□□□ 0.32
CHD4-210ENST00000544040 DCLK2Q8N568 766 aa17.03■□□□□ 0.32
CHD4-210ENST00000544040 PRXQ9BXM0 1461 aa17.03■□□□□ 0.32
CHD4-210ENST00000544040 ZNF445P59923 1031 aa17.03■□□□□ 0.32
CHD4-210ENST00000544040 NBPF14Q5TI25 921 aa17.03■□□□□ 0.32
CHD4-210ENST00000544040 LMBRD1Q9NUN5 540 aa17.03■□□□□ 0.32
CHD4-210ENST00000544040 UFL1O94874 794 aa17.03■□□□□ 0.32
CHD4-210ENST00000544040 JDP2Q8WYK2 163 aa17.03■□□□□ 0.32
CHD4-210ENST00000544040 CPXCR1Q8N123 301 aa17.03■□□□□ 0.32
CHD4-210ENST00000544040 CMTR1Q8N1G2 835 aaKnown RBP17.03■□□□□ 0.32
CHD4-210ENST00000544040 BCAS4Q8TDM0 211 aa17.03■□□□□ 0.32
CHD4-210ENST00000544040 RTCBQ9Y3I0 505 aaKnown RBP17.03■□□□□ 0.32
CHD4-210ENST00000544040 BIRC2Q13490 618 aa17.02■□□□□ 0.32
CHD4-210ENST00000544040 JADE1Q6IE81 842 aa17.02■□□□□ 0.32
CHD4-210ENST00000544040 TPH2Q8IWU9 490 aa17.02■□□□□ 0.32
CHD4-210ENST00000544040 BCAP29Q9UHQ4 241 aa17.02■□□□□ 0.32
CHD4-210ENST00000544040 TRIM35Q9UPQ4 493 aa17.02■□□□□ 0.32
CHD4-210ENST00000544040 TAF5LO75529 589 aa17.02■□□□□ 0.32
CHD4-210ENST00000544040 CCDC93Q567U6 631 aa17.02■□□□□ 0.32
CHD4-210ENST00000544040 KCNJ18B7U540 433 aa17.02■□□□□ 0.32
CHD4-210ENST00000544040 KCNJ12Q14500 433 aa17.02■□□□□ 0.32
CHD4-210ENST00000544040 TRIM4Q9C037 500 aa17.02■□□□□ 0.32
CHD4-210ENST00000544040 RAB20Q9NX57 234 aa17.02■□□□□ 0.32
CHD4-210ENST00000544040 KDM2BQ8NHM5 1336 aa17.02■□□□□ 0.31
CHD4-210ENST00000544040 CASP2P42575 452 aa17.02■□□□□ 0.31
CHD4-210ENST00000544040 TFCP2L1Q9NZI6 479 aa17.02■□□□□ 0.31
CHD4-210ENST00000544040 ATF7P17544 494 aaPredicted RBP17.02■□□□□ 0.31
CHD4-210ENST00000544040 CDAN1Q8IWY9 1227 aa17.02■□□□□ 0.31
CHD4-210ENST00000544040 ARHGEF10LQ9HCE6 1279 aa17.02■□□□□ 0.31
CHD4-210ENST00000544040 PICK1Q9NRD5 415 aa17.02■□□□□ 0.31
CHD4-210ENST00000544040 TMOD4Q9NZQ9 345 aa17.02■□□□□ 0.31
CHD4-210ENST00000544040 SPDYE16A6NNV3 312 aaPredicted RBP17.01■□□□□ 0.31
CHD4-210ENST00000544040 SPDYE2Q495Y8 402 aa17.01■□□□□ 0.31
CHD4-210ENST00000544040 KCTD16Q68DU8 428 aa17.01■□□□□ 0.31
CHD4-210ENST00000544040 RIOK1Q9BRS2 568 aaKnown RBP17.01■□□□□ 0.31
CHD4-210ENST00000544040 SH2D4AQ9H788 454 aa17.01■□□□□ 0.31
CHD4-210ENST00000544040 THAP12O43422 761 aa17.01■□□□□ 0.31
CHD4-210ENST00000544040 GSTA1P08263 222 aa17.01■□□□□ 0.31
CHD4-210ENST00000544040 GSTA2P09210 222 aa17.01■□□□□ 0.31
CHD4-210ENST00000544040 INPP1P49441 399 aa17.01■□□□□ 0.31
CHD4-210ENST00000544040 BRD3Q15059 726 aa17.01■□□□□ 0.31
CHD4-210ENST00000544040 KAZNQ674X7 775 aa17.01■□□□□ 0.31
CHD4-210ENST00000544040 PHACTR3Q96KR7 559 aa17.01■□□□□ 0.31
CHD4-210ENST00000544040 CARD10Q9BWT7 1032 aa17.01■□□□□ 0.31
CHD4-210ENST00000544040 ITKQ08881 620 aa17.01■□□□□ 0.31
CHD4-210ENST00000544040 RASIP1Q5U651 963 aa17.01■□□□□ 0.31
CHD4-210ENST00000544040 TMEM63CQ9P1W3 806 aa17.01■□□□□ 0.31
CHD4-210ENST00000544040 MAP3K5Q99683 1374 aa17.01■□□□□ 0.31
CHD4-210ENST00000544040 CFBP00751 764 aa17.01■□□□□ 0.31
CHD4-210ENST00000544040 KRT3P12035 628 aa17.01■□□□□ 0.31
CHD4-210ENST00000544040 SUDS3Q9H7L9 328 aaPredicted RBP17.01■□□□□ 0.31
CHD4-210ENST00000544040 ZBTB7BO15156 539 aaPredicted RBP17.01■□□□□ 0.31
CHD4-210ENST00000544040 PHBP35232 272 aa17.01■□□□□ 0.31
CHD4-210ENST00000544040 SNCBQ16143 134 aa17.01■□□□□ 0.31
CHD4-210ENST00000544040 DDB1Q16531 1140 aa17.01■□□□□ 0.31
CHD4-210ENST00000544040 FAM47AQ5JRC9 791 aa17.01■□□□□ 0.31
CHD4-210ENST00000544040 RBM17Q96I25 401 aaKnown RBP17.01■□□□□ 0.31
CHD4-210ENST00000544040 PCF11O94913 1555 aaKnown RBP17■□□□□ 0.31
CHD4-210ENST00000544040 HIBADHP31937 336 aaKnown RBP17■□□□□ 0.31
CHD4-210ENST00000544040 PRKG1Q13976 671 aa17■□□□□ 0.31
CHD4-210ENST00000544040 MAP3K21Q5TCX8 1036 aa17■□□□□ 0.31
CHD4-210ENST00000544040 MAIP1Q8WWC4 291 aa17■□□□□ 0.31
CHD4-210ENST00000544040 MORC3Q14149 939 aa17■□□□□ 0.31
CHD4-210ENST00000544040 PPP2R2CQ9Y2T4 447 aa17■□□□□ 0.31
CHD4-210ENST00000544040 ADCY1Q08828 1119 aa17■□□□□ 0.31
CHD4-210ENST00000544040 NAA35Q5VZE5 725 aa17■□□□□ 0.31
CHD4-210ENST00000544040 SEC23IPQ9Y6Y8 1000 aaKnown RBP17■□□□□ 0.31
CHD4-210ENST00000544040 COBLO75128 1261 aa17■□□□□ 0.31
CHD4-210ENST00000544040 CCT5P48643 541 aa17■□□□□ 0.31
CHD4-210ENST00000544040 TCP10Q12799 353 aa17■□□□□ 0.31
CHD4-210ENST00000544040 KRT25Q7Z3Z0 450 aa17■□□□□ 0.31
CHD4-210ENST00000544040 IRX4P78413 519 aa17■□□□□ 0.31
CHD4-210ENST00000544040 LCA5Q86VQ0 697 aa17■□□□□ 0.31
CHD4-210ENST00000544040 EYA3Q99504 573 aa17■□□□□ 0.31
CHD4-210ENST00000544040 PDE11AQ9HCR9 933 aa17■□□□□ 0.31
CHD4-210ENST00000544040 GPHNQ9NQX3 736 aaPredicted RBP17■□□□□ 0.31
CHD4-210ENST00000544040 PUM3Q15397 648 aaKnown RBP16.99■□□□□ 0.31
CHD4-210ENST00000544040 C8orf37Q96NL8 207 aa16.99■□□□□ 0.31
CHD4-210ENST00000544040 MED10Q9BTT4 135 aa16.99■□□□□ 0.31
CHD4-210ENST00000544040 RIC8AQ9NPQ8 531 aa16.99■□□□□ 0.31
CHD4-210ENST00000544040 PPP1R9AQ9ULJ8 1098 aa16.99■□□□□ 0.31
CHD4-210ENST00000544040 PTPN22Q9Y2R2 807 aa16.99■□□□□ 0.31
CHD4-210ENST00000544040 RPAINQ86UA6 219 aa16.99■□□□□ 0.31
CHD4-210ENST00000544040 POMGNT1Q8WZA1 660 aa16.99■□□□□ 0.31
CHD4-210ENST00000544040 HYOU1Q9Y4L1 999 aa16.99■□□□□ 0.31
CHD4-210ENST00000544040 NR1I2O75469 434 aa16.99■□□□□ 0.31
CHD4-210ENST00000544040 MMEL1Q495T6 779 aa16.99■□□□□ 0.31
CHD4-210ENST00000544040 TRIM58Q8NG06 486 aa16.99■□□□□ 0.31
CHD4-210ENST00000544040 BZW2Q9Y6E2 419 aaKnown RBP16.99■□□□□ 0.31
CHD4-210ENST00000544040 MAGI1Q96QZ7 1491 aaPredicted RBP16.99■□□□□ 0.31
CHD4-210ENST00000544040 FAM102BQ5T8I3 360 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms