RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 BMP2KLQ5H9B9 411 aa25.85■■□□□ 1.73
OTUB1-212ENST00000543988 ERICH6BQ5W0A0 696 aa25.85■■□□□ 1.73
OTUB1-212ENST00000543988 RUFY2Q8WXA3 655 aa25.85■■□□□ 1.73
OTUB1-212ENST00000543988 LPAR1Q92633 364 aa25.85■■□□□ 1.73
OTUB1-212ENST00000543988 NYAP2Q9P242 653 aa25.85■■□□□ 1.73
OTUB1-212ENST00000543988 ZSWIM8A7E2V4 1837 aa25.85■■□□□ 1.73
OTUB1-212ENST00000543988 PSMC4P43686 418 aa25.84■■□□□ 1.73
OTUB1-212ENST00000543988 FBXO46Q6PJ61 603 aaPredicted RBP25.84■■□□□ 1.73
OTUB1-212ENST00000543988 CATSPERGQ6ZRH7 1159 aa25.84■■□□□ 1.73
OTUB1-212ENST00000543988 PPP4R2Q9NY27 417 aa25.84■■□□□ 1.73
OTUB1-212ENST00000543988 MTMR4Q9NYA4 1195 aa25.84■■□□□ 1.73
OTUB1-212ENST00000543988 SGSM2O43147 1006 aa25.83■■□□□ 1.73
OTUB1-212ENST00000543988 RANBP6O60518 1105 aaKnown RBP25.83■■□□□ 1.73
OTUB1-212ENST00000543988 PEX10O60683 326 aa25.83■■□□□ 1.73
OTUB1-212ENST00000543988 ARHGEF6Q15052 776 aa25.83■■□□□ 1.73
OTUB1-212ENST00000543988 POTEEQ6S8J3 1075 aa25.83■■□□□ 1.73
OTUB1-212ENST00000543988 TANGO6Q9C0B7 1094 aa25.83■■□□□ 1.73
OTUB1-212ENST00000543988 TXNRD2Q9NNW7 524 aa25.83■■□□□ 1.73
OTUB1-212ENST00000543988 MORF4L1Q9UBU8 362 aa25.83■■□□□ 1.73
OTUB1-212ENST00000543988 TSPY2A6NKD2 308 aa25.82■■□□□ 1.72
OTUB1-212ENST00000543988 RRP12Q5JTH9 1297 aaKnown RBP25.82■■□□□ 1.72
OTUB1-212ENST00000543988 GOPCQ9HD26 462 aa25.82■■□□□ 1.72
OTUB1-212ENST00000543988 TOMM22Q9NS69 142 aa25.82■■□□□ 1.72
OTUB1-212ENST00000543988 CLIP2Q9UDT6 1046 aa25.82■■□□□ 1.72
OTUB1-212ENST00000543988 HPS5Q9UPZ3 1129 aa25.82■■□□□ 1.72
OTUB1-212ENST00000543988 PTPN22Q9Y2R2 807 aa25.82■■□□□ 1.72
OTUB1-212ENST00000543988 HTTP42858 3142 aa25.82■■□□□ 1.72
OTUB1-212ENST00000543988 FMNL1O95466 1100 aaPredicted RBP25.81■■□□□ 1.72
OTUB1-212ENST00000543988 FCGRTP55899 365 aa25.81■■□□□ 1.72
OTUB1-212ENST00000543988 AKNAD1Q5T1N1 836 aa25.81■■□□□ 1.72
OTUB1-212ENST00000543988 STAG1Q8WVM7 1258 aa25.81■■□□□ 1.72
OTUB1-212ENST00000543988 NEDD4P46934 1319 aa25.81■■□□□ 1.72
OTUB1-212ENST00000543988 SPDYE16A6NNV3 312 aaPredicted RBP25.8■■□□□ 1.72
OTUB1-212ENST00000543988 ZNF213O14771 459 aa25.8■■□□□ 1.72
OTUB1-212ENST00000543988 WDR46O15213 610 aaKnown RBP25.8■■□□□ 1.72
OTUB1-212ENST00000543988 RAD21O60216 631 aa25.8■■□□□ 1.72
OTUB1-212ENST00000543988 NMT2O60551 498 aa25.8■■□□□ 1.72
OTUB1-212ENST00000543988 TTLL1O95922 423 aa25.8■■□□□ 1.72
OTUB1-212ENST00000543988 LRRC47Q8N1G4 583 aaKnown RBP25.8■■□□□ 1.72
OTUB1-212ENST00000543988 GTF3C2Q8WUA4 911 aaPredicted RBP25.8■■□□□ 1.72
OTUB1-212ENST00000543988 PAGR1Q9BTK6 254 aa25.8■■□□□ 1.72
OTUB1-212ENST00000543988 RBPJLQ9UBG7 517 aa25.8■■□□□ 1.72
OTUB1-212ENST00000543988 CTNNA3Q9UI47 895 aa25.8■■□□□ 1.72
OTUB1-212ENST00000543988 CAPN15O75808 1086 aa25.79■■□□□ 1.72
OTUB1-212ENST00000543988 NDUFB10O96000 172 aa25.79■■□□□ 1.72
OTUB1-212ENST00000543988 GNRH1P01148 92 aa25.79■■□□□ 1.72
OTUB1-212ENST00000543988 PTH1RQ03431 593 aa25.79■■□□□ 1.72
OTUB1-212ENST00000543988 IFFO2Q5TF58 517 aa25.79■■□□□ 1.72
OTUB1-212ENST00000543988 MFSD6Q6ZSS7 791 aa25.79■■□□□ 1.72
OTUB1-212ENST00000543988 NKX2-3Q8TAU0 364 aa25.79■■□□□ 1.72
OTUB1-212ENST00000543988 RNF41Q9H4P4 317 aaPredicted RBP25.79■■□□□ 1.72
OTUB1-212ENST00000543988 IL17RBQ9NRM6 502 aa25.79■■□□□ 1.72
OTUB1-212ENST00000543988 PTCH2Q9Y6C5 1203 aa25.79■■□□□ 1.72
OTUB1-212ENST00000543988 CNMDO75829 334 aa25.78■■□□□ 1.72
OTUB1-212ENST00000543988 PCP11498 1178 aaKnown RBP25.78■■□□□ 1.72
OTUB1-212ENST00000543988 IMMTQ16891 758 aaKnown RBP25.78■■□□□ 1.72
OTUB1-212ENST00000543988 LBX2Q6XYB7 198 aa25.78■■□□□ 1.72
OTUB1-212ENST00000543988 GPRC5AQ8NFJ5 357 aa25.78■■□□□ 1.72
OTUB1-212ENST00000543988 MKL1Q969V6 931 aa25.78■■□□□ 1.72
OTUB1-212ENST00000543988 NUP88Q99567 741 aaPredicted RBP25.78■■□□□ 1.72
OTUB1-212ENST00000543988 SRRDQ9UH36 339 aa25.78■■□□□ 1.72
OTUB1-212ENST00000543988 LAMA4Q16363 1823 aa25.77■■□□□ 1.72
OTUB1-212ENST00000543988 F5H6K3 240 aa25.77■■□□□ 1.72
OTUB1-212ENST00000543988 TNPO2O14787 897 aaKnown RBP25.77■■□□□ 1.72
OTUB1-212ENST00000543988 FLOT1O75955 427 aa25.77■■□□□ 1.72
OTUB1-212ENST00000543988 ERVK-9P63128 1117 aa25.77■■□□□ 1.72
OTUB1-212ENST00000543988 ERVK-24P63145 666 aa25.77■■□□□ 1.72
OTUB1-212ENST00000543988 KLRC3Q07444 240 aa25.77■■□□□ 1.72
OTUB1-212ENST00000543988 FAM83BQ5T0W9 1011 aa25.77■■□□□ 1.72
OTUB1-212ENST00000543988 SYNPO2Q9UMS6 1093 aa25.77■■□□□ 1.72
OTUB1-212ENST00000543988 RABGAP1Q9Y3P9 1069 aa25.77■■□□□ 1.72
OTUB1-212ENST00000543988 PRKCZQ05513 592 aa25.76■■□□□ 1.71
OTUB1-212ENST00000543988 COG2Q14746 738 aa25.76■■□□□ 1.71
OTUB1-212ENST00000543988 ESYT1Q9BSJ8 1104 aa25.76■■□□□ 1.71
OTUB1-212ENST00000543988 FBXO28Q9NVF7 368 aa25.76■■□□□ 1.71
OTUB1-212ENST00000543988 STX8Q9UNK0 236 aa25.76■■□□□ 1.71
OTUB1-212ENST00000543988 MYPNQ86TC9 1320 aa25.76■■□□□ 1.71
OTUB1-212ENST00000543988 PPP4R3BQ5MIZ7 849 aa25.75■■□□□ 1.71
OTUB1-212ENST00000543988 GMCL1P1Q8NEA9 526 aa25.75■■□□□ 1.71
OTUB1-212ENST00000543988 BTBD7Q9P203 1132 aa25.75■■□□□ 1.71
OTUB1-212ENST00000543988 CCDC85CA6NKD9 419 aa25.74■■□□□ 1.71
OTUB1-212ENST00000543988 HOXD10P28358 340 aa25.74■■□□□ 1.71
OTUB1-212ENST00000543988 NOVP48745 357 aa25.74■■□□□ 1.71
OTUB1-212ENST00000543988 PRMT2P55345 433 aa25.74■■□□□ 1.71
OTUB1-212ENST00000543988 Q3C1V9 767 aa25.74■■□□□ 1.71
OTUB1-212ENST00000543988 SAMD1Q6SPF0 538 aaPredicted RBP25.74■■□□□ 1.71
OTUB1-212ENST00000543988 ATG4CQ96DT6 458 aa25.74■■□□□ 1.71
OTUB1-212ENST00000543988 PORCNQ9H237 461 aa25.74■■□□□ 1.71
OTUB1-212ENST00000543988 HOXC10Q9NYD6 342 aa25.74■■□□□ 1.71
OTUB1-212ENST00000543988 U3KPZ7 1027 aaPredicted RBP25.74■■□□□ 1.71
OTUB1-212ENST00000543988 DSG3P32926 999 aa25.73■■□□□ 1.71
OTUB1-212ENST00000543988 ESR2Q92731 530 aa25.73■■□□□ 1.71
OTUB1-212ENST00000543988 GABRQQ9UN88 632 aa25.73■■□□□ 1.71
OTUB1-212ENST00000543988 CDC45O75419 566 aa25.72■■□□□ 1.71
OTUB1-212ENST00000543988 SLFN13Q68D06 897 aa25.72■■□□□ 1.71
OTUB1-212ENST00000543988 TCP11L1Q9NUJ3 509 aa25.72■■□□□ 1.71
OTUB1-212ENST00000543988 B4E1Z4 1266 aa25.71■■□□□ 1.71
OTUB1-212ENST00000543988 KDM4AO75164 1064 aa25.71■■□□□ 1.71
OTUB1-212ENST00000543988 MAP4K1Q92918 833 aa25.71■■□□□ 1.71
OTUB1-212ENST00000543988 COA7Q96BR5 231 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms