RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 Q7L0L9 218 aa27.36■■□□□ 1.97
CDKN3-207ENST00000543789 TANGO6Q9C0B7 1094 aa27.36■■□□□ 1.97
CDKN3-207ENST00000543789 IGHA2P01877 340 aa27.35■■□□□ 1.97
CDKN3-207ENST00000543789 TMEM179Q6ZVK1 233 aa27.35■■□□□ 1.97
CDKN3-207ENST00000543789 RPAP2Q8IXW5 612 aaPredicted RBP27.35■■□□□ 1.97
CDKN3-207ENST00000543789 LCORLQ8N3X6 602 aa27.35■■□□□ 1.97
CDKN3-207ENST00000543789 SPATC1LQ9H0A9 340 aa27.35■■□□□ 1.97
CDKN3-207ENST00000543789 SWAP70Q9UH65 585 aa27.35■■□□□ 1.97
CDKN3-207ENST00000543789 MYH1P12882 1939 aa27.34■■□□□ 1.97
CDKN3-207ENST00000543789 DNM1LO00429 736 aa27.34■■□□□ 1.97
CDKN3-207ENST00000543789 CYP2D6P10635 497 aa27.34■■□□□ 1.97
CDKN3-207ENST00000543789 MS4A1P11836 297 aa27.34■■□□□ 1.97
CDKN3-207ENST00000543789 ADORA2AP29274 412 aa27.34■■□□□ 1.97
CDKN3-207ENST00000543789 OLFML2BQ68BL8 750 aa27.34■■□□□ 1.97
CDKN3-207ENST00000543789 SLC44A5Q8NCS7 719 aa27.34■■□□□ 1.97
CDKN3-207ENST00000543789 SHCBP1Q8NEM2 672 aa27.34■■□□□ 1.97
CDKN3-207ENST00000543789 TRPV1Q8NER1 839 aa27.34■■□□□ 1.97
CDKN3-207ENST00000543789 BCL11AQ9H165 835 aa27.34■■□□□ 1.97
CDKN3-207ENST00000543789 HMMRO75330 724 aa27.33■■□□□ 1.97
CDKN3-207ENST00000543789 ERCC3P19447 782 aa27.33■■□□□ 1.97
CDKN3-207ENST00000543789 ATN1P54259 1190 aaPredicted RBP27.33■■□□□ 1.97
CDKN3-207ENST00000543789 MB21D1Q8N884 522 aa27.33■■□□□ 1.97
CDKN3-207ENST00000543789 LBHD1Q9BQE6 289 aaPredicted RBP27.33■■□□□ 1.97
CDKN3-207ENST00000543789 ARMT1Q9H993 441 aa27.33■■□□□ 1.97
CDKN3-207ENST00000543789 MTMR10Q9NXD2 777 aa27.33■■□□□ 1.97
CDKN3-207ENST00000543789 CYBAP13498 195 aa27.32■■□□□ 1.96
CDKN3-207ENST00000543789 KIAA1755Q5JYT7 1200 aa27.32■■□□□ 1.96
CDKN3-207ENST00000543789 ARRDC4Q8NCT1 418 aa27.32■■□□□ 1.96
CDKN3-207ENST00000543789 DYNLL2Q96FJ2 89 aa27.32■■□□□ 1.96
CDKN3-207ENST00000543789 COL6A3P12111 3177 aa27.32■■□□□ 1.96
CDKN3-207ENST00000543789 DSG3P32926 999 aa27.31■■□□□ 1.96
CDKN3-207ENST00000543789 SIAH1Q8IUQ4 282 aa27.31■■□□□ 1.96
CDKN3-207ENST00000543789 ARHGEF10LQ9HCE6 1279 aa27.31■■□□□ 1.96
CDKN3-207ENST00000543789 ATP8A2Q9NTI2 1148 aa27.31■■□□□ 1.96
CDKN3-207ENST00000543789 SLC5A4Q9NY91 659 aa27.31■■□□□ 1.96
CDKN3-207ENST00000543789 STXBP5LQ9Y2K9 1186 aa27.31■■□□□ 1.96
CDKN3-207ENST00000543789 COBLO75128 1261 aa27.3■■□□□ 1.96
CDKN3-207ENST00000543789 RAB11FIP3O75154 756 aa27.3■■□□□ 1.96
CDKN3-207ENST00000543789 FLOT1O75955 427 aa27.3■■□□□ 1.96
CDKN3-207ENST00000543789 PLS1Q14651 629 aa27.3■■□□□ 1.96
CDKN3-207ENST00000543789 MIER1Q8N108 512 aa27.3■■□□□ 1.96
CDKN3-207ENST00000543789 BOLA2Q9H3K6 86 aa27.3■■□□□ 1.96
CDKN3-207ENST00000543789 MROH8Q9H579 483 aa27.3■■□□□ 1.96
CDKN3-207ENST00000543789 SH2D4AQ9H788 454 aa27.3■■□□□ 1.96
CDKN3-207ENST00000543789 PAG1Q9NWQ8 432 aa27.3■■□□□ 1.96
CDKN3-207ENST00000543789 TMX2Q9Y320 296 aa27.3■■□□□ 1.96
CDKN3-207ENST00000543789 PRKAB2O43741 272 aa27.29■■□□□ 1.96
CDKN3-207ENST00000543789 AKR1B1P15121 316 aa27.29■■□□□ 1.96
CDKN3-207ENST00000543789 ICA1Q05084 483 aa27.29■■□□□ 1.96
CDKN3-207ENST00000543789 GJC2Q5T442 439 aaPredicted RBP27.29■■□□□ 1.96
CDKN3-207ENST00000543789 NCAPG2Q86XI2 1143 aa27.29■■□□□ 1.96
CDKN3-207ENST00000543789 SIRT2Q8IXJ6 389 aa27.29■■□□□ 1.96
CDKN3-207ENST00000543789 CCDC17Q96LX7 622 aa27.29■■□□□ 1.96
CDKN3-207ENST00000543789 PRKAG2Q9UGJ0 569 aa27.29■■□□□ 1.96
CDKN3-207ENST00000543789 MBD4O95243 580 aa27.28■■□□□ 1.96
CDKN3-207ENST00000543789 ADD2P35612 726 aa27.28■■□□□ 1.96
CDKN3-207ENST00000543789 RTP1P59025 263 aa27.28■■□□□ 1.96
CDKN3-207ENST00000543789 SLFNL1Q499Z3 407 aa27.28■■□□□ 1.96
CDKN3-207ENST00000543789 ABRAQ8N0Z2 381 aa27.28■■□□□ 1.96
CDKN3-207ENST00000543789 SPICE1Q8N0Z3 855 aa27.28■■□□□ 1.96
CDKN3-207ENST00000543789 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.28■■□□□ 1.96
CDKN3-207ENST00000543789 VCPKMTQ9H867 229 aa27.28■■□□□ 1.96
CDKN3-207ENST00000543789 ZBTB40Q9NUA8 1239 aa27.28■■□□□ 1.96
CDKN3-207ENST00000543789 SEPT4O43236 478 aa27.27■■□□□ 1.96
CDKN3-207ENST00000543789 ATP5JP18859 108 aa27.27■■□□□ 1.96
CDKN3-207ENST00000543789 AMOTL1Q8IY63 956 aa27.27■■□□□ 1.96
CDKN3-207ENST00000543789 ATG4CQ96DT6 458 aa27.27■■□□□ 1.96
CDKN3-207ENST00000543789 DDX19BQ9UMR2 479 aa27.27■■□□□ 1.96
CDKN3-207ENST00000543789 ZBED9Q6R2W3 1325 aa27.26■■□□□ 1.95
CDKN3-207ENST00000543789 CDK8P49336 464 aa27.26■■□□□ 1.95
CDKN3-207ENST00000543789 C12orf60Q5U649 245 aa27.26■■□□□ 1.95
CDKN3-207ENST00000543789 ANO1Q5XXA6 986 aa27.26■■□□□ 1.95
CDKN3-207ENST00000543789 CLEC10AQ8IUN9 316 aa27.26■■□□□ 1.95
CDKN3-207ENST00000543789 USP17L12C9JPN9 530 aa27.25■■□□□ 1.95
CDKN3-207ENST00000543789 KBTBD13C9JR72 458 aa27.25■■□□□ 1.95
CDKN3-207ENST00000543789 USP17L21D6R901 530 aa27.25■■□□□ 1.95
CDKN3-207ENST00000543789 WDR46O15213 610 aaKnown RBP27.25■■□□□ 1.95
CDKN3-207ENST00000543789 PRAMEF19Q5SWL8 479 aa27.25■■□□□ 1.95
CDKN3-207ENST00000543789 SAMD1Q6SPF0 538 aaPredicted RBP27.25■■□□□ 1.95
CDKN3-207ENST00000543789 SLC39A5Q6ZMH5 540 aa27.25■■□□□ 1.95
CDKN3-207ENST00000543789 HAUS7Q99871 368 aa27.25■■□□□ 1.95
CDKN3-207ENST00000543789 ATP11BQ9Y2G3 1177 aa27.25■■□□□ 1.95
CDKN3-207ENST00000543789 COG6Q9Y2V7 657 aa27.25■■□□□ 1.95
CDKN3-207ENST00000543789 FCER1AP12319 257 aa27.24■■□□□ 1.95
CDKN3-207ENST00000543789 DDRGK1Q96HY6 314 aa27.24■■□□□ 1.95
CDKN3-207ENST00000543789 CYP2D7A0A087X1C5 515 aa27.23■■□□□ 1.95
CDKN3-207ENST00000543789 POTEB2H3BUK9 544 aa27.23■■□□□ 1.95
CDKN3-207ENST00000543789 SMIM22K7EJ46 135 aa27.23■■□□□ 1.95
CDKN3-207ENST00000543789 SLC25A27O95847 323 aa27.23■■□□□ 1.95
CDKN3-207ENST00000543789 MYCNP04198 464 aaPredicted RBP27.23■■□□□ 1.95
CDKN3-207ENST00000543789 TMEM132BQ14DG7 1078 aa27.23■■□□□ 1.95
CDKN3-207ENST00000543789 UBE3CQ15386 1083 aa27.23■■□□□ 1.95
CDKN3-207ENST00000543789 FAM109BQ6ICB4 259 aaPredicted RBP27.23■■□□□ 1.95
CDKN3-207ENST00000543789 MAML3Q96JK9 1138 aa27.23■■□□□ 1.95
CDKN3-207ENST00000543789 EEF2P13639 858 aaKnown RBP27.22■■□□□ 1.95
CDKN3-207ENST00000543789 C16orf86Q6ZW13 317 aa27.22■■□□□ 1.95
CDKN3-207ENST00000543789 CHMP4BQ9H444 224 aaKnown RBP27.22■■□□□ 1.95
CDKN3-207ENST00000543789 KANSL2Q9H9L4 492 aa27.22■■□□□ 1.95
CDKN3-207ENST00000543789 ADAMTS5Q9UNA0 930 aa27.22■■□□□ 1.95
CDKN3-207ENST00000543789 SLC4A4Q9Y6R1 1079 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms