RNA–Protein interactions for RNA: ENST00000543756.5

DDX11-226, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 3

Gene DDX11, Length 613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-226ENST00000543756 GMCL1P1Q8NEA9 526 aa20.36■□□□□ 0.85
DDX11-226ENST00000543756 NKX2-3Q8TAU0 364 aa20.36■□□□□ 0.85
DDX11-226ENST00000543756 GOPCQ9HD26 462 aa20.36■□□□□ 0.85
DDX11-226ENST00000543756 CLIP2Q9UDT6 1046 aa20.36■□□□□ 0.85
DDX11-226ENST00000543756 WDR19Q8NEZ3 1342 aa20.35■□□□□ 0.85
DDX11-226ENST00000543756 HMGB1P09429 215 aaKnown RBP20.35■□□□□ 0.85
DDX11-226ENST00000543756 FAM43AQ8N2R8 423 aa20.35■□□□□ 0.85
DDX11-226ENST00000543756 ZSCAN10Q96SZ4 725 aaPredicted RBP20.35■□□□□ 0.85
DDX11-226ENST00000543756 STX8Q9UNK0 236 aa20.35■□□□□ 0.85
DDX11-226ENST00000543756 NMT2O60551 498 aa20.34■□□□□ 0.85
DDX11-226ENST00000543756 VCAM1P19320 739 aa20.34■□□□□ 0.85
DDX11-226ENST00000543756 RCSD1Q6JBY9 416 aa20.34■□□□□ 0.85
DDX11-226ENST00000543756 GADL1Q6ZQY3 521 aa20.34■□□□□ 0.85
DDX11-226ENST00000543756 IL17RAQ96F46 866 aa20.34■□□□□ 0.85
DDX11-226ENST00000543756 UBAC1Q9BSL1 405 aa20.34■□□□□ 0.85
DDX11-226ENST00000543756 SNX14Q9Y5W7 946 aa20.34■□□□□ 0.85
DDX11-226ENST00000543756 PDHXO00330 501 aa20.33■□□□□ 0.85
DDX11-226ENST00000543756 WDR46O15213 610 aaKnown RBP20.33■□□□□ 0.85
DDX11-226ENST00000543756 TOP1P11387 765 aaKnown RBP20.33■□□□□ 0.85
DDX11-226ENST00000543756 MCM5P33992 734 aa20.33■□□□□ 0.85
DDX11-226ENST00000543756 ANAPC15P60006 121 aa20.33■□□□□ 0.85
DDX11-226ENST00000543756 ATP2B2Q01814 1243 aa20.33■□□□□ 0.85
DDX11-226ENST00000543756 SART3Q15020 963 aaKnown RBP20.33■□□□□ 0.85
DDX11-226ENST00000543756 CYB5R4Q7L1T6 521 aa20.33■□□□□ 0.85
DDX11-226ENST00000543756 NEK1Q96PY6 1258 aa20.33■□□□□ 0.85
DDX11-226ENST00000543756 BEGAINQ9BUH8 593 aa20.33■□□□□ 0.85
DDX11-226ENST00000543756 RNF186Q9NXI6 227 aa20.33■□□□□ 0.85
DDX11-226ENST00000543756 PNMA3Q9UL41 463 aa20.33■□□□□ 0.85
DDX11-226ENST00000543756 TNKSO95271 1327 aa20.32■□□□□ 0.84
DDX11-226ENST00000543756 F5H6K3 240 aa20.32■□□□□ 0.84
DDX11-226ENST00000543756 KLRC3Q07444 240 aa20.32■□□□□ 0.84
DDX11-226ENST00000543756 TREML2Q5T2D2 321 aa20.32■□□□□ 0.84
DDX11-226ENST00000543756 ENAHQ8N8S7 591 aaPredicted RBP20.32■□□□□ 0.84
DDX11-226ENST00000543756 GMCL1Q96IK5 515 aa20.32■□□□□ 0.84
DDX11-226ENST00000543756 PARK7Q99497 189 aaKnown RBP20.32■□□□□ 0.84
DDX11-226ENST00000543756 USP17L15C9J2P7 530 aa20.31■□□□□ 0.84
DDX11-226ENST00000543756 USP17L13C9JLJ4 530 aa20.31■□□□□ 0.84
DDX11-226ENST00000543756 USP17L11C9JVI0 530 aa20.31■□□□□ 0.84
DDX11-226ENST00000543756 USP17L18D6R9N7 530 aa20.31■□□□□ 0.84
DDX11-226ENST00000543756 USP17L22D6RA61 530 aa20.31■□□□□ 0.84
DDX11-226ENST00000543756 USP17L17D6RBQ6 530 aa20.31■□□□□ 0.84
DDX11-226ENST00000543756 USP17L19D6RCP7 530 aa20.31■□□□□ 0.84
DDX11-226ENST00000543756 USP17L20D6RJB6 530 aa20.31■□□□□ 0.84
DDX11-226ENST00000543756 SEC24BO95487 1268 aa20.31■□□□□ 0.84
DDX11-226ENST00000543756 PSMA5P28066 241 aa20.31■□□□□ 0.84
DDX11-226ENST00000543756 ANTXR2P58335 489 aa20.31■□□□□ 0.84
DDX11-226ENST00000543756 USP17L24Q0WX57 530 aa20.31■□□□□ 0.84
DDX11-226ENST00000543756 SEC23AQ15436 765 aa20.31■□□□□ 0.84
DDX11-226ENST00000543756 ZYXQ15942 572 aaKnown RBP20.31■□□□□ 0.84
DDX11-226ENST00000543756 NOM1Q5C9Z4 860 aaKnown RBP20.31■□□□□ 0.84
DDX11-226ENST00000543756 TMEM87BQ96K49 555 aa20.31■□□□□ 0.84
DDX11-226ENST00000543756 TMEM47Q9BQJ4 181 aa20.31■□□□□ 0.84
DDX11-226ENST00000543756 TM6SF1Q9BZW5 370 aa20.31■□□□□ 0.84
DDX11-226ENST00000543756 ERICH2A1L162 156 aa20.3■□□□□ 0.84
DDX11-226ENST00000543756 OSBPP22059 807 aa20.3■□□□□ 0.84
DDX11-226ENST00000543756 DGKZQ13574 1117 aa20.3■□□□□ 0.84
DDX11-226ENST00000543756 ADCK5Q3MIX3 580 aa20.3■□□□□ 0.84
DDX11-226ENST00000543756 KIAA1755Q5JYT7 1200 aa20.3■□□□□ 0.84
DDX11-226ENST00000543756 DHX32Q7L7V1 743 aaKnown RBP20.3■□□□□ 0.84
DDX11-226ENST00000543756 ZKSCAN3Q9BRR0 538 aa20.3■□□□□ 0.84
DDX11-226ENST00000543756 ZFYVE28Q9HCC9 887 aa20.3■□□□□ 0.84
DDX11-226ENST00000543756 MYPNQ86TC9 1320 aa20.29■□□□□ 0.84
DDX11-226ENST00000543756 PRC1O43663 620 aa20.29■□□□□ 0.84
DDX11-226ENST00000543756 NDUFB10O96000 172 aa20.29■□□□□ 0.84
DDX11-226ENST00000543756 EXOSC10Q01780 885 aaKnown RBP20.29■□□□□ 0.84
DDX11-226ENST00000543756 TAF1CQ15572 869 aaPredicted RBP20.29■□□□□ 0.84
DDX11-226ENST00000543756 LBX2Q6XYB7 198 aa20.29■□□□□ 0.84
DDX11-226ENST00000543756 CATSPERGQ6ZRH7 1159 aa20.29■□□□□ 0.84
DDX11-226ENST00000543756 LRRC47Q8N1G4 583 aaKnown RBP20.29■□□□□ 0.84
DDX11-226ENST00000543756 TMTC2Q8N394 836 aa20.29■□□□□ 0.84
DDX11-226ENST00000543756 FBXL16Q8N461 479 aa20.29■□□□□ 0.84
DDX11-226ENST00000543756 IGDCC4Q8TDY8 1250 aa20.29■□□□□ 0.84
DDX11-226ENST00000543756 GTF3C2Q8WUA4 911 aaPredicted RBP20.29■□□□□ 0.84
DDX11-226ENST00000543756 RPAP3Q9H6T3 665 aaPredicted RBP20.29■□□□□ 0.84
DDX11-226ENST00000543756 ADGRA2Q96PE1 1338 aa20.28■□□□□ 0.84
DDX11-226ENST00000543756 IFIT3O14879 490 aaKnown RBP20.28■□□□□ 0.84
DDX11-226ENST00000543756 TLR2O60603 784 aa20.28■□□□□ 0.84
DDX11-226ENST00000543756 TRPA1O75762 1119 aa20.28■□□□□ 0.84
DDX11-226ENST00000543756 SNHG28P0DPA3 235 aa20.28■□□□□ 0.84
DDX11-226ENST00000543756 LIFRP42702 1097 aa20.28■□□□□ 0.84
DDX11-226ENST00000543756 IFIT1BQ5T764 474 aaKnown RBP20.28■□□□□ 0.84
DDX11-226ENST00000543756 DCAF4Q8WV16 495 aa20.28■□□□□ 0.84
DDX11-226ENST00000543756 ASCC2Q9H1I8 757 aaPredicted RBP20.28■□□□□ 0.84
DDX11-226ENST00000543756 KAT14Q9H8E8 782 aa20.28■□□□□ 0.84
DDX11-226ENST00000543756 SH2B2O14492 632 aaPredicted RBP20.27■□□□□ 0.84
DDX11-226ENST00000543756 PLA2G6O60733 806 aa20.27■□□□□ 0.84
DDX11-226ENST00000543756 IRX3P78415 501 aaPredicted RBP20.27■□□□□ 0.84
DDX11-226ENST00000543756 CRHR2Q13324 411 aa20.27■□□□□ 0.84
DDX11-226ENST00000543756 WTAPQ15007 396 aa20.27■□□□□ 0.84
DDX11-226ENST00000543756 TMEM67Q5HYA8 995 aa20.27■□□□□ 0.84
DDX11-226ENST00000543756 SLFN13Q68D06 897 aa20.27■□□□□ 0.84
DDX11-226ENST00000543756 SPICE1Q8N0Z3 855 aa20.27■□□□□ 0.84
DDX11-226ENST00000543756 PNMA1Q8ND90 353 aa20.27■□□□□ 0.84
DDX11-226ENST00000543756 JAKMIP1Q96N16 626 aaKnown RBP20.27■□□□□ 0.84
DDX11-226ENST00000543756 ZSWIM6Q9HCJ5 1215 aa20.27■□□□□ 0.84
DDX11-226ENST00000543756 MYH4Q9Y623 1939 aa20.26■□□□□ 0.83
DDX11-226ENST00000543756 GCLCP48506 637 aaPredicted RBP20.26■□□□□ 0.83
DDX11-226ENST00000543756 BLOC1S2Q6QNY1 142 aa20.26■□□□□ 0.83
DDX11-226ENST00000543756 SGMS1Q86VZ5 419 aa20.26■□□□□ 0.83
DDX11-226ENST00000543756 LY9Q9HBG7 655 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms